Mercurial > repos > iuc > pangolin
changeset 25:ca337cce3888 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pangolin commit 7c0046582ccfc786f39ba071974e550aebee86af
| author | iuc |
|---|---|
| date | Fri, 14 Oct 2022 23:50:44 +0000 |
| parents | 92dd6da871f4 |
| children | 007ffbb11881 |
| files | tool-data/pangolearn.loc tool-data/pangolearn.loc.sample tool-data/pangolin_assignment.loc.sample tool-data/pangolin_constellations.loc.sample tool-data/pangolin_data.loc.sample |
| diffstat | 5 files changed, 30 insertions(+), 18 deletions(-) [+] |
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--- a/tool-data/pangolearn.loc Wed Aug 03 07:54:25 2022 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,10 +0,0 @@ -# this is a tab separated file describing the location of pangoLEARN databases used for the -# pangolin SARS-CoV-2 lineage typing tool -# -# the columns are: -# value description format_version path -# -# for example -# 2021-04-14 pangoLEARN data release 2021-04-14 1.0 /tmp/database/pangolearn/pangolearn/2021-04-14 -2021-04-21 pangoLEARN data release 2021-04-21 1.0 ${__HERE__}/2021-04-21 -2021-05-27 pangoLEARN data release 2021-05-27 3.0 ${__HERE__}/2021-05-27
--- a/tool-data/pangolearn.loc.sample Wed Aug 03 07:54:25 2022 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,8 +0,0 @@ -# this is a tab separated file describing the location of pangoLEARN databases used for the -# pangolin SARS-CoV-2 lineage typing tool -# -# the columns are: -# value description format_version path -# -# for example -# 2021-04-14 pangoLEARN data release 2021-04-14 1.0 /tmp/database/pangolearn/pangolearn/2021-04-14
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/pangolin_assignment.loc.sample Fri Oct 14 23:50:44 2022 +0000 @@ -0,0 +1,10 @@ +# this is a tab separated file describing the location of pangolin_data databases used for the +# pangolin SARS-CoV-2 lineage typing tool +# +# the columns are: +# value description min_pangolin_version date path +# +# min_pangolin_version is the minimum pangolin tool major version that is needed to read the pangolin_data +# +# for example +#v1.11 pangolin-assignment v1.11 4 2022-06-29T19:09:03 /srv/galaxy/tool-data/pangolin_assignment/v1.11
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/pangolin_constellations.loc.sample Fri Oct 14 23:50:44 2022 +0000 @@ -0,0 +1,10 @@ +# this is a tab separated file describing the location of constellations databases used for the +# scorpio part of the pangolin SARS-CoV-2 lineage typing tool +# +# the columns are: +# value description min_scorpio_version date path +# +# min_scorpio_version is the minimum scorpio tool major version that is needed to read the constellations data +# +# for example +#v0.1.10 constellations release v0.1.10 0 2022-05-05T13:14:56 /srv/galaxy/tool-data/pangolin_constellations/v0.1.10
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/pangolin_data.loc.sample Fri Oct 14 23:50:44 2022 +0000 @@ -0,0 +1,10 @@ +# this is a tab separated file describing the location of pangolin_data databases used for the +# pangolin SARS-CoV-2 lineage typing tool +# +# the columns are: +# value description min_pangolin_version date path +# +# min_pangolin_version is the minimum pangolin tool major version that is needed to read the pangolin_data +# +# for example +#v1.11 pangolin-data v1.11 4 2022-06-29T15:57:17 /srv/galaxy/tool-data/pangolin_data/v1.11