Mercurial > repos > iuc > pipelign
view test-data/pipelign-in1.fasta @ 0:cd9d1eccda7e draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pipelign commit 94da3b18b4725a93d8c52469ae809e692ba0cd77"
author | iuc |
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date | Fri, 23 Aug 2019 14:47:13 -0400 |
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>K03455|HIVHXB2CG_1286_1769_0_0_0_4_0_0_0/1 CAGAAGTGATACCCATGTTTTCAGCATTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAA >K03455|HIVHXB2CG_5977_6467_2_0_0_2_0_0_1/1 GAAGAAGCGGAGACAGCGACGAAGAGCTCATCAGAACAGTCAGACTCATCAAGCTTCTCAATCAAATCAG >K03455|HIVHXB2CG_6040_6545_1_0_0_0_0_0_2/1 ATCCTCATGCATCTGTTCTACCATGTCATTTTTCCACATGTTAAAATTTTCTGTCACATTTACCAATACT >K03455|HIVHXB2CG_3580_4035_1_0_0_0_0_0_3/1 CTATGTTTACTTCTAATCCCGAATCCTGCAAAGCTAGATAAATTGCTTGTAACTCAGTCTTCTGATTTGT >K03455|HIVHXB2CG_5251_5720_0_0_0_1_0_0_4/1 CCAAGTATCCCCATAAGTTTCATAGATATGATGCCCTAAGCCATGGAGCCAAATCCTAGGAAAATGTCTA >K03455|HIVHXB2CG_5574_6092_2_0_0_1_0_0_5/1 CTACTATTGCTACTAATGGTATAGGTTGCGTTACATGTACTACTTACTGCTTTGATAGAGAAGCTTGATG >K03455|HIVHXB2CG_7273_7731_1_0_0_5_0_0_6/1 TCTTTGCCTTGGTTGGAGCAACTCCTAATGGTTGAATTTTTACTACTTTATATTTATATAATTCCCTTCT >K03455|HIVHXB2CG_5438_5909_1_0_0_4_0_0_7/1 AATAGCAATTTGTACAAGCAGTTTTAGGCTGACTTCGTGGATGCTTCCAGGGCTCTCGTCTAGGATCAAC >K03455|HIVHXB2CG_4165_4569_2_0_0_3_0_0_8/1 ACAACGGAATTGGAGGAAATGAACCAGTAGATAAATTAGTCAGTGCTGGAATCAGGAAAGTACTATTTTT >K03455|HIVHXB2CG_2832_3397_3_0_0_2_0_0_9/1 AGGATTTTACATAATTGCCTTACTTAAATCCCTGGGTAAATCTGACTTGCCCAATTCAATTTCCCCACTA >K03455|HIVHXB2CG_1312_1798_2_0_0_1_0_0_a/1 TTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTACACCCAGTGGGGGGACATCAAGCAGCCA >K03455|HIVHXB2CG_6501_7035_0_0_0_0_0_0_b/1 CTACCTCTTCTTCTGCTAGACTGCCATTTAACAGCAGTTGAGTTGATACTACTGGCCTAATTCCATGTGT >K03455|HIVHXB2CG_2252_2786_0_0_0_0_0_0_c/1 TTCTCTGAAATCTACTAATTTTCTCCATTTAGTACTGTCTTTTTTCTTTATGGCAAATACTGGAGTATTG >K03455|HIVHXB2CG_5968_6386_1_0_0_1_0_0_d/1 CTATGGCAGGAAGAAGCGGAGACAGCGACGAAGAGCTCATCAGAACAGTCAGACTCATCAAGCTTCTGTA >K03455|HIVHXB2CG_7972_8486_1_0_0_0_0_0_e/1 TGCCAAGGATCCGTTCACTAATCGAATGGATCTGTCTCTGTCTCTCTCTCCACCTTCTTCTTCTATTCCT >K03455|HIVHXB2CG_368_934_2_0_0_3_0_0_f/1 CAGGATTAACTGCGAATCTTTCTAGCTCCCTTGTTGCCCATACTATATGTTTTAATTTATATTTTTTCTT >K03455|HIVHXB2CG_8446_8894_4_0_0_3_0_0_10/1 GCTGCTCCCACCCTATCTTGTGCTGGCTCAGCTCGTCTCATTGTTTCCCTTACAGTAGGCCATCCAATCA >K03455|HIVHXB2CG_6869_7379_1_0_0_3_0_1_11/1 ACAGTAGAAAAATTCCCCTCCACCATTAAAACTGTGGTTACAATATCTGGGTCCCCTCCTGAGGATTGGT >K03455|HIVHXB2CG_6976_7493_0_0_0_0_0_0_12/1 TTAGGCCAGTAGTATCAACTCAACTGCTGTTAAATGGCAGTCTAGCAGAAGAAGAGGTAGTAATTAGATC >K03455|HIVHXB2CG_5034_5548_1_0_0_4_0_0_13/1 AGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAATTAGACAGGATGAGGATTAGAACATGG >K03455|HIVHXB2CG_418_930_3_0_0_1_0_0_14/1 GATCCTGCATATAAGCAGCAGCTTTTTGCCTTTACTGGTTCTCTCTGGTTAGACCAGATCTGAGCCTGGG >K03455|HIVHXB2CG_8325_8818_2_0_0_2_0_0_15/1 GTACTTTCTATAGTGAATAGAGTTAGGCAGGTATATTCACCATTATCGTTTGAGACCCACCTCCCAACCC >K03455|HIVHXB2CG_673_1207_2_0_0_2_0_0_16/1 CAGAGGAGGTCTCTCGACGCAGGACTCGGCTTGCTGAAGGGCGCACGGCAAGAGGCGAGGGGCGGCGACT >K03455|HIVHXB2CG_7932_8405_1_0_0_1_0_0_17/1 GTCTGGGGCATCAAGCAGCTCCAGGCAAGAATGCTGGCTGTGGAAAGATACCTAAAGGATCAACAGCTCC >K03455|HIVHXB2CG_2894_3537_2_0_0_0_0_0_18/1 TTTTTCAGTTCGCTTAGATGAAGACTTCAGGCAGTATACTGCATTTACCATACCTAGTATAAACAATGAG >K03455|HIVHXB2CG_5989_6545_2_0_0_1_0_0_19/1 ACAGCGACGAAGAGCTCATCAGAACAGACAGACTCATCAAGCTTCTCTATCAAAGCAGTAAGTATTACAT >K03455|HIVHXB2CG_5199_5715_1_0_0_2_0_0_1a/1 TATCCCCATAAGTTTCATCGATATGTTGCCCTAAGCGATGGAGCCAAATCCTAGGAAAATGTCTAACAGC >K03455|HIVHXB2CG_4803_5329_1_0_0_2_0_0_1b/1 GGGGGGAACAGTGCAGGGGAAAGAATAGTAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAA >K03455|HIVHXB2CG_1302_1790_0_0_0_1_0_0_1c/1 GTTTTCAGCATTATCAGAAGGAGCCACCCCACAAGATTTAAACACCATGCTAAACACAGTGGGGGGACAT >K03455|HIVHXB2CG_1672_2143_3_0_0_2_0_0_1d/1 TGCTCTGAAGAAAATTCCCTGGCCTTCCCTTGTAGTAAGGCCATATCTTCCCTAAAAAATTAGCCTGTCT >K03455|HIVHXB2CG_7_537_2_0_0_1_0_0_1e/1 GGCTAATTCACTCCCAACGAAGACAAGATATCCTTGATCTGTGGATGTACCACCCACAAGGCTACTTCCC >K03455|HIVHXB2CG_3447_3973_0_0_0_1_0_0_1f/1 TGATTTGTTGTGTCAGTTAGGGTGACAACTTTTTGTGTTCCTCTATTAGTAACATATCCTGCTTTTCCTA >K03455|HIVHXB2CG_5516_5958_3_0_0_2_0_0_20/1 TAACGCCACCTTTGCCTAGTGTTACGAAACTGCCAGAGGATAGATGGAACAAGCCCCAGAAGACGAAGGG >K03455|HIVHXB2CG_8434_8946_0_0_0_1_0_0_21/1 GTGGAGAGAGAGACAGAGACAGATCCATTCGATTAGTGAACGGATCCTTGGCACTTATCTGGGACGATCT >K03455|HIVHXB2CG_2808_3255_0_0_0_1_0_0_22/1 TTCTGGGAAGTTCAATTAGGAATACCACATCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTGG >K03455|HIVHXB2CG_5108_5621_3_0_0_2_0_0_23/1 CTCTAGTGTCCATTCATTGTGTGGCTCCCTCTGTGGCCCTTGGTCTTCTTGGGCTTGTTCCATCTCTCCT >K03455|HIVHXB2CG_3875_4298_2_0_0_1_0_0_24/1 AGCCATTGCTCTCCAATTACTGTGATATTTCTCATGTTCATCTTGGGCCTTAACTATTCCATCTAAAAAT >K03455|HIVHXB2CG_8231_8877_0_0_0_3_0_0_25/1 TGCTGCTGGCTCAGCTCGTCTCATTCATTCCCTTACAGTAGGCCATCCAATCACACTACATATTGACCAC >K03455|HIVHXB2CG_7126_7621_1_1_1_3_1_0_26/1 TCGGAGTCATTGTTGCTATTACCACCATCTTTTGTTCATAGCAGCCCTGTAATATTTGATTAACATCTAA >K03455|HIVHXB2CG_3672_4151_0_0_0_1_0_0_27/1 ATAACCACAGAAAGCATAGTAATATGGGGAAAGACTCCTAAATTTAAACTGCCCATACAAAAGGAAACAT >K03455|HIVHXB2CG_4642_5125_0_0_0_3_0_0_28/1 TAAGGTGTTTTACTAAACTTTTCCATGTTGTAATCCTCATCCTGTCTCCTTGCCACACAATCATCACCTG >K03455|HIVHXB2CG_8349_8802_1_0_0_0_0_0_29/1 ACCCATCTTATAGCAAAATCCTTTCCAAGCCCTGTCTTATTCTTCTAGGTATGTGGCGAATAGCTCTACA >K03455|HIVHXB2CG_1667_2209_4_0_0_2_0_0_2a/1 GAGGGGGAGTTGTTGTCTGTACCCCAGACCTGAAGCTCTCTTCTTGTGGGGCTGTTGGCTCTGGTCTGCT >K03455|HIVHXB2CG_4476_4938_5_0_0_3_0_0_2b/1 TATAAAGACGCAGAAGTTATTCCAGCATACACAGGGCAGGAAACAGCATATTTTCTTTTCAAATTAGCAG >K03455|HIVHXB2CG_7957_8508_2_0_0_2_1_0_2c/1 TCCGAAGATCGTCCCAGATAAGTGCCAAGGATCCGTTCACTACTCGAATGGATCTGACTCTGTCTCTCTC >K03455|HIVHXB2CG_6810_7300_0_0_0_0_0_0_2d/1 TGTAACACCTCAGTCATTACACAGGCCTGTCCAAAGGTATCCTTTGAGCCAATTCCCATACATTATTGTG >K03455|HIVHXB2CG_4957_5462_2_0_0_1_0_0_2e/1 GGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGACATAACAGTAGTGCGAAGAAGAAAAGCAAA >K03455|HIVHXB2CG_2020_2541_3_0_0_6_0_0_2f/1 AAGTGCAAGCAATCTGATTCACCCGATTTCTTCCAATTATGATGACAGGTGTAGGTCCTACTAATACAGT >K03455|HIVHXB2CG_3823_4361_1_0_0_0_0_0_30/1 TATGGTACCAGTTAGAGAAAGAACCCCTAGTAGGAGCAGAAACCTTCTATGTAGATGGGGCAGCTAACAG >K03455|HIVHXB2CG_4420_4903_1_0_0_1_0_0_31/1 ATTGTACACATTTAGAATGAAAAGTTATCCTGGTAGCAGTTCATGTAGCCAGTGGATATATAGAAGCAGA >K03455|HIVHXB2CG_6480_6947_0_0_0_2_0_0_32/1 TTGGTAAATGTGACAGAAAATTTTAACATGTGGAAAAATGACATGGTAGAACAGATGCATGAGGATATAA >K03455|HIVHXB2CG_1739_2301_2_0_0_2_0_0_33/1 TGACAGAAACCTAGTTGGTCCAAAATGCGAACCCAGATTGTAAGACAATTTTAAAAGCATTGGGACCAGC >K03455|HIVHXB2CG_756_1235_2_0_0_1_0_0_34/1 GGTGATATGGGCTGATGTACCATTTGCCCCTGGATGTTCTGCACTATAGGGTAATTTTGGCTGACCTGAT >K03455|HIVHXB2CG_6482_6962_0_0_0_1_0_0_35/1 GGTAAATGTGACAGAAAATTTTAACATGTGGAAAAATGACATGGTAGAACAGATGCATGAGGATATAATC >K03455|HIVHXB2CG_217_724_2_1_0_2_0_0_36/1 GCCTGCATGGAATGGATGACCCGGAGAGAGAAGTGTTAGAGTGGAGGTTTGAGAGCCACCTAGCAATTCA >K03455|HIVHXB2CG_667_1161_0_0_0_1_0_0_37/1 GGAAACCAGAGGAGCTCTCTCGACGCAGGACTCGGCTTGCTGAAGCGCGCACGGCAAGAGGCGAGGGGCG >K03455|HIVHXB2CG_8069_8641_1_0_0_0_0_0_38/1 TCCTGACTCCAATACTGTAGGAGATTCCACCAATATTTGAGGGCTTCCCACCCCCTGCGTCCCAGAAGTT >K03455|HIVHXB2CG_1786_2269_1_0_0_1_0_0_39/1 ATTTTAAAAGCATTGGGACCAGCGGCTACACTAGAAGAAATGATGACAGCATGTCAGGGAGTAGGATGAC >K03455|HIVHXB2CG_6065_6509_1_0_0_1_0_0_3a/1 CAACCTATACCAATAGTAGCAATAGTAGCATTAGTAGTAGCAATAATAATAGCAATAGTTGAGTGGTCCA >K03455|HIVHXB2CG_9061_9383_1_0_0_4_0_0_3b/1 CACTTATTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTCACTCCCAAAGAAGACAAGATATCCTTGATC >K03455|HIVHXB2CG_9142_9638_2_0_0_2_0_0_3c/1 CTTGAAGCACTCAAGGCAAGCTTTATTGCGGCTTAATCAGTGGGTTCCCTAGTTAGCCAGAGAGCTCCCA >K03455|HIVHXB2CG_4276_4897_1_0_0_1_0_0_3d/1 ACAGTAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCTGTAGTAGCAAAAGAAATAGTAGCCCG >K03455|HIVHXB2CG_3569_4048_0_0_0_4_0_0_3e/1 AATTTATCAAGAGCCATTTAAAAATCTGAAAACAGGAAAATATGCAAGAATGAGGGGTGCCCACACTAAT >K03455|HIVHXB2CG_5990_6505_1_0_0_0_0_0_3f/1 TTAAAATTTTCTGTCACATTTACCAATACTACTTCTTGTGGGTTGGGGTCTGTGGGTACACAGGCATGTG >K03455|HIVHXB2CG_8342_8779_1_0_0_2_0_0_40/1 TCCAAGCCCTGTCTTATTCTTCTAGGTATGTGGCGCATAGCTCTACAAGCTCCTTGTACTACTTCAATAA >K03455|HIVHXB2CG_6619_7094_0_0_0_2_0_0_41/1 TGTGTTCAGCTGTACTATTATGGTTATAGCATTTTCCGTGAAATTGACAGATCTAATTACTACCTCTTCT >K03455|HIVHXB2CG_5150_5584_1_0_0_2_0_0_42/1 GATGGTTTTATAGACATCACTATGAAAGCCCTCATCCAAGAAAAAGTTCAGAAGTACACATCCCACTAGG >K03455|HIVHXB2CG_5329_5821_2_0_0_2_0_0_43/1 TCCTCTGTCGAGTAACGCCTATTCTGCTATGACGACACCCAATTCTGAAACTGGATAAACAGCAGTTGTT >K03455|HIVHXB2CG_4457_4958_4_0_0_0_0_0_44/1 AGTTCATGTATCCAGTGGATATATAGAAGCAGAAGTTATTCCAGCAGAAACAGGGGCTGAAACAGCATAT >K03455|HIVHXB2CG_906_1404_1_0_0_3_0_0_45/1 GGAGCTAGAACGATTCGCAGTTAATCCTGGCGTGTTAGAAACATCAGAAGGCTGTAGACAAATACTGGGA >K03455|HIVHXB2CG_2685_3250_0_0_0_0_0_0_46/1 AAAATTTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAGTATTTGCCATAAAGAAAAAAGACAGTA >K03455|HIVHXB2CG_6045_6577_2_0_0_1_0_0_47/1 AGTAAGTAGTACCTGTAACGCAACCTATACCAATAGTAGCAATAGTAGCATTAGTAGTAGCACTAATAAT >K03455|HIVHXB2CG_1707_2205_1_0_0_3_0_0_48/1 CGAGCAAGCTTCACAGGAGTTAAAAAATTGGATGACAGAAACCTTGTTGGTCCAAAATGCGAACCCAGAT >K03455|HIVHXB2CG_4939_5430_1_0_0_0_0_0_49/1 GACCAGCAAAGCACCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGACATAAAAGTAGT >K03455|HIVHXB2CG_3199_3700_2_0_0_1_0_0_4a/1 CCCCATATTACTATGCTTTCTGTGGTTAATTTTTGCACTGCCTCTGTTAATTGTTTTACATCATTAGTGT >K03455|HIVHXB2CG_1717_2240_0_0_0_2_0_0_4b/1 TCACAGGAGGTAAAAAATTGGATGACAGAAACCTTGTTGGTCCAAAATGCGAACCCAGATTGTAAGACTA >K03455|HIVHXB2CG_9067_9580_2_0_0_1_0_0_4c/1 TTAAAAGAAAAGGGGGGACTGGAAGGGCTAATTCACTGCCAAAGAAGACAAGATATCCTTGATCTGAGGA >K03455|HIVHXB2CG_6865_7379_1_0_0_0_0_1_4d/1 ACAGTAGAAAAATTCCCCTCCACAATTAAAACTGTGGTTACAATTTCTGGGTCCCCTCCTGAGGATTGCT >K03455|HIVHXB2CG_9174_9651_1_0_0_0_0_0_4e/1 CGGGCACACACTACTTGAAGCACTCAAGGCAAGCTTTATTGAGGCTTAAGCAGTGGGTTCCCTAGTTAGC >K03455|HIVHXB2CG_1644_2213_4_0_0_3_0_0_4f/1 TTCTGAGGGGGAGATGTTGTCTCTAGCCCAGACCTGAAGCTCTCTTCTGGTGGGGCAGTTGGCTCTGGTC >K03455|HIVHXB2CG_6323_6872_1_0_0_2_0_0_50/1 ATGTATGGGAATTGGCTGAAAGGATACCTTTGGACAGGCCTGAGTAATGACTGAGGTGTTACAACTTGTC >K03455|HIVHXB2CG_2700_3243_0_0_0_3_1_0_51/1 CACCCATCCAAAGGAATTGAGGTTCTTTCTGATGTTTTTTGTCTGGTGTGGTAAGTCCCCACCTCGACAG >K03455|HIVHXB2CG_4053_4544_2_0_0_2_0_0_52/1 TGCTAATTTTAAAAGACAATATTCTGTTTCCTGCCCTGTTTCTGCTGGAATAACTTCTGCTTCTATATAT >K03455|HIVHXB2CG_3027_3517_0_0_0_6_0_0_53/1 TTTTATGGTTCATAATCCACTCCATGTACTGGTTCTTTTAGAATCTCTCATTTTTCTGCCCGTTCTAGCT >K03455|HIVHXB2CG_313_880_0_0_0_2_0_0_54/1 CTTTATATTTTTTCTTACCCCCTGGCCTTAACCGAATTTTTTCCCATCGATCTAATTCTCCCCCGCTTAA >K03455|HIVHXB2CG_1938_2460_2_0_0_0_0_0_55/1 TAGGAACCAAAGAAAGATAGTTAAGTGTTTCAATTGTGGCACAGAAGGGCACACAGCCAGAAATTGCAGG >K03455|HIVHXB2CG_1235_1682_3_0_0_0_0_0_56/1 TCTACATAGTCTCTAAAGGGTTCCTTTGGTCCTTGTCTTATGTCCAGAATGCTGGTAGGGCTATACATTC >K03455|HIVHXB2CG_1835_2322_3_0_0_1_0_0_57/1 ATAGAGCTTCCTTTAGTTGCCCCCCTATCTTTATTGTGACGAGGGGACGTTGCCAAAGAGTGACCTGAGG >K03455|HIVHXB2CG_2276_2810_0_0_0_0_0_0_58/1 GAAGTCTTGAGTTCTCTTATTAAGTTCTCTGAAATCTACTAATTTTCTCCATTTAGTACTGTCTTTTTTC >K03455|HIVHXB2CG_3596_4110_1_0_0_2_0_0_59/1 TTTGATTGACTAACTCTGATTCACTTTGATCTTGTAGTGCTTGAATGATTCCTAATGCATATTGTGAGTC >K03455|HIVHXB2CG_7233_7687_1_0_0_1_0_0_5a/1 ACTTTATATTTATATAATTCACTTCTCCAATTGTCCCTCATCTCTCCTCCTCCAGGTCTGAAGATCTCGG >K03455|HIVHXB2CG_5794_6187_2_0_0_0_0_0_5b/1 AGCAGAATAGGCGTTACTCGACAGAGGAGAGCAAGAAATGTAGCCAGTAGATCCTAGACTATAGCCCTGG >K03455|HIVHXB2CG_3441_3888_1_0_0_0_0_0_5c/1 GAAGCAGAGCTAGAACTGGCAGAAAACAGAGAGATTCTAAAATAACCAGTACATGGAGTGTATTATGACC >K03455|HIVHXB2CG_2928_3444_5_0_0_1_0_0_5d/1 CTTCTTCTGTTAGTGGTATTACTTCTGTTAGTGCTTTGGTACCTCTAAGGAGTTTACATAATTGCCTTAC >K03455|HIVHXB2CG_7609_8146_1_0_0_1_0_0_5e/1 AAGCTTGTGTAATTGTTAATTTCTCTGTCCCACTCCATCCAGGTCGTGTGATTCCAACTCTGTTCCAGAG >K03455|HIVHXB2CG_121_652_1_0_0_0_0_0_5f/1 TCCCTGTTCGGGCGCCACTGCTAGAGATTTTCCACACTGACTAAAAGGGTCTGAGGGATCTCTAGTTACC >K03455|HIVHXB2CG_5585_6024_1_0_0_0_0_0_60/1 GCCACAGAGGGAGCCACACAATGAATGGACACTATAGCTTTTAGAGGAGCTTAAGAATGAAGCTGTTAGA >K03455|HIVHXB2CG_7976_8475_3_0_0_1_0_0_61/1 CAGATACCTAAATGATCAACAGCTCCTGGGGATTTGGGGTTGCTCTGGAAAACTCATTTGCACCCCTGCT >K03455|HIVHXB2CG_3703_4231_2_0_0_1_0_0_62/1 AATAGTACTTTCCTGATTCCAGCACTGACTAAATTATCTACTTGTTCATTTCCTCCAATTCCTTTGTGTG >K03455|HIVHXB2CG_6322_6838_1_0_0_0_1_0_63/1 AATTGTGGGTCACAGTCTATTATGGGGTACCTGTGTGGCAGGAAGCAACCACCACTCTATTTTGTGCATC