diff tool-data/all_fasta.loc.sample @ 1:91ef4a171202 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pizzly/ commit 0ad49d906b38e290b860310e73b1f8585ac65d09
author iuc
date Tue, 03 Oct 2017 18:04:46 -0400
parents f7556cfa4047
children
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--- a/tool-data/all_fasta.loc.sample	Wed Sep 13 22:40:57 2017 -0400
+++ b/tool-data/all_fasta.loc.sample	Tue Oct 03 18:04:46 2017 -0400
@@ -1,7 +1,6 @@
-#This file lists the locations and dbkeys of all the fasta files
+#This file lists the locations and dbkeys of all the genome and transcriptome fasta files
 #under the "genome" directory (a directory that contains a directory
-#for each build). The script extract_fasta.py will generate the file
-#all_fasta.loc. This file has the format (white space characters are
+#for each build. This file has the format (white space characters are
 #TAB characters):
 #
 #<unique_build_id>	<dbkey>	<display_name>	<file_path>
@@ -9,10 +8,11 @@
 #So, all_fasta.loc could look something like this:
 #
 #apiMel3	apiMel3	Honeybee (Apis mellifera): apiMel3	/path/to/genome/apiMel3/apiMel3.fa
-#hg38canon	hg38	Human (Homo sapiens): hg38 Canonical	/path/to/genome/hg38/hg38canon.fa
-#hg38full	hg38	Human (Homo sapiens): hg38 Full	/path/to/genome/hg38/hg38full.fa
-#
+#hg19canon	hg19	Human (Homo sapiens): hg19 Canonical	/path/to/genome/hg19/hg19canon.fa
+#hg19full	hg19	Human (Homo sapiens): hg19 Full	/path/to/genome/hg19/hg19full.fa
+#hg19full.87       hg19    Human (Homo sapiens): hg19 Full Trans v87 /path/to/genome/hg19/hg19full.cdna.all.fa
+
 #Your all_fasta.loc file should contain an entry for each individual
 #fasta file. So there will be multiple fasta files for each build,
-#such as with hg38 above.
+#such as with hg19 above.
 #