diff test-data/out.sexcheck @ 0:a98caf1d69ab draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/plink commit 555a851b363c015f26d6fcf1f52bcbf3420a0b3b"
author iuc
date Mon, 21 Sep 2020 10:09:22 +0000
parents
children
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/out.sexcheck	Mon Sep 21 10:09:22 2020 +0000
@@ -0,0 +1,201 @@
+    FID     IID       PEDSEX       SNPSEX       STATUS            F   YCOUNT
+   per0    per0            2            2           OK     -0.00203        0
+   per1    per1            2            2           OK      -0.3874        0
+   per2    per2            2            2           OK      -0.3874        0
+   per3    per3            2            2           OK      -0.2333        0
+   per4    per4            2            2           OK     -0.00203        0
+   per5    per5            2            2           OK     -0.00203        0
+   per6    per6            2            2           OK     -0.07911        0
+   per7    per7            2            2           OK     -0.00203        0
+   per8    per8            2            0      PROBLEM       0.2292        0
+   per9    per9            2            2           OK      0.07505        0
+  per10   per10            2            2           OK     -0.07911        0
+  per11   per11            2            2           OK       0.1521        0
+  per12   per12            2            2           OK     -0.00203        0
+  per13   per13            2            2           OK     -0.00203        0
+  per14   per14            2            2           OK      -0.2333        0
+  per15   per15            2            2           OK     -0.00203        0
+  per16   per16            2            0      PROBLEM       0.2292        0
+  per17   per17            2            2           OK     -0.07911        0
+  per18   per18            2            2           OK     -0.07911        0
+  per19   per19            2            2           OK      -0.1562        0
+  per20   per20            2            2           OK      0.07505        0
+  per21   per21            2            2           OK      0.07505        0
+  per22   per22            2            2           OK      0.07505        0
+  per23   per23            2            2           OK       0.1521        0
+  per24   per24            2            2           OK      -0.2333        0
+  per25   per25            2            2           OK      -0.4645        0
+  per26   per26            2            2           OK       0.1521        0
+  per27   per27            2            2           OK      0.07505        0
+  per28   per28            2            2           OK       0.1521        0
+  per29   per29            2            2           OK      -0.1562        0
+  per30   per30            2            2           OK     -0.00203        0
+  per31   per31            2            0      PROBLEM       0.2292        0
+  per32   per32            2            2           OK      0.07505        0
+  per33   per33            2            2           OK     -0.00203        0
+  per34   per34            2            2           OK     -0.00203        0
+  per35   per35            2            0      PROBLEM       0.2292        0
+  per36   per36            2            2           OK      0.07505        0
+  per37   per37            2            2           OK       0.1521        0
+  per38   per38            2            2           OK     -0.07911        0
+  per39   per39            2            2           OK      0.07505        0
+  per40   per40            2            2           OK      -0.2333        0
+  per41   per41            2            2           OK     -0.07911        0
+  per42   per42            2            0      PROBLEM       0.4604        0
+  per43   per43            2            2           OK      -0.5416        0
+  per44   per44            2            2           OK     -0.00203        0
+  per45   per45            2            0      PROBLEM       0.2292        0
+  per46   per46            2            2           OK      -0.1562        0
+  per47   per47            2            2           OK       0.1521        0
+  per48   per48            2            2           OK       0.1521        0
+  per49   per49            2            2           OK      0.07505        0
+  per50   per50            2            2           OK     -0.00203        0
+  per51   per51            2            2           OK      -0.2333        0
+  per52   per52            2            0      PROBLEM       0.2292        0
+  per53   per53            2            2           OK      -0.1562        0
+  per54   per54            2            2           OK      -0.2333        0
+  per55   per55            2            2           OK      -0.1562        0
+  per56   per56            2            2           OK      0.07505        0
+  per57   per57            2            2           OK     -0.07911        0
+  per58   per58            2            0      PROBLEM       0.2292        0
+  per59   per59            2            2           OK      -0.1562        0
+  per60   per60            2            2           OK      0.07505        0
+  per61   per61            2            2           OK       0.1521        0
+  per62   per62            2            2           OK      0.07505        0
+  per63   per63            2            2           OK      0.07505        0
+  per64   per64            2            2           OK     -0.07911        0
+  per65   per65            2            2           OK       0.1521        0
+  per66   per66            2            2           OK      0.07505        0
+  per67   per67            2            2           OK       0.1521        0
+  per68   per68            2            2           OK      -0.1562        0
+  per69   per69            2            2           OK     -0.07911        0
+  per70   per70            2            2           OK      -0.3103        0
+  per71   per71            2            2           OK     -0.00203        0
+  per72   per72            2            2           OK     -0.07911        0
+  per73   per73            2            2           OK      0.07505        0
+  per74   per74            2            2           OK      -0.3103        0
+  per75   per75            2            2           OK     -0.00203        0
+  per76   per76            2            2           OK      -0.2333        0
+  per77   per77            2            2           OK       0.1521        0
+  per78   per78            2            2           OK      -0.3103        0
+  per79   per79            2            2           OK     -0.07911        0
+  per80   per80            2            2           OK      0.07505        0
+  per81   per81            2            2           OK     -0.00203        0
+  per82   per82            2            0      PROBLEM       0.2292        0
+  per83   per83            2            2           OK       0.1521        0
+  per84   per84            2            2           OK     -0.07911        0
+  per85   per85            2            0      PROBLEM       0.2292        0
+  per86   per86            2            2           OK      0.07505        0
+  per87   per87            2            2           OK     -0.00203        0
+  per88   per88            2            2           OK     -0.00203        0
+  per89   per89            2            2           OK       0.1521        0
+  per90   per90            2            0      PROBLEM       0.2292        0
+  per91   per91            2            2           OK     -0.00203        0
+  per92   per92            2            2           OK      -0.2333        0
+  per93   per93            2            2           OK     -0.07911        0
+  per94   per94            2            2           OK      -0.2333        0
+  per95   per95            2            2           OK       0.1521        0
+  per96   per96            2            2           OK      0.07505        0
+  per97   per97            2            2           OK       0.1521        0
+  per98   per98            2            2           OK     -0.00203        0
+  per99   per99            2            2           OK       0.1521        0
+ per100  per100            2            2           OK      -0.2333        0
+ per101  per101            2            2           OK     -0.07911        0
+ per102  per102            2            2           OK      0.07505        0
+ per103  per103            2            0      PROBLEM       0.2292        0
+ per104  per104            2            2           OK      -0.1562        0
+ per105  per105            2            2           OK      0.07505        0
+ per106  per106            2            2           OK       0.1521        0
+ per107  per107            2            2           OK       0.1521        0
+ per108  per108            2            2           OK     -0.00203        0
+ per109  per109            2            2           OK     -0.00203        0
+ per110  per110            2            0      PROBLEM       0.2292        0
+ per111  per111            2            0      PROBLEM       0.2292        0
+ per112  per112            2            0      PROBLEM       0.2292        0
+ per113  per113            2            2           OK      0.07505        0
+ per114  per114            2            2           OK       0.1521        0
+ per115  per115            2            2           OK     -0.00203        0
+ per116  per116            2            0      PROBLEM       0.3834        0
+ per117  per117            2            2           OK      -0.1562        0
+ per118  per118            2            2           OK      -0.2333        0
+ per119  per119            2            2           OK      -0.3874        0
+ per120  per120            2            2           OK       0.1521        0
+ per121  per121            2            2           OK      -0.5416        0
+ per122  per122            2            2           OK       0.1521        0
+ per123  per123            2            2           OK       0.1521        0
+ per124  per124            2            2           OK      -0.3874        0
+ per125  per125            2            2           OK      -0.1562        0
+ per126  per126            2            2           OK      0.07505        0
+ per127  per127            2            2           OK     -0.07911        0
+ per128  per128            2            2           OK      -0.1562        0
+ per129  per129            2            0      PROBLEM       0.2292        0
+ per130  per130            2            2           OK      -0.5416        0
+ per131  per131            2            0      PROBLEM       0.2292        0
+ per132  per132            2            2           OK      -0.1562        0
+ per133  per133            2            2           OK     -0.00203        0
+ per134  per134            2            2           OK      0.07505        0
+ per135  per135            2            2           OK      -0.1562        0
+ per136  per136            2            2           OK      0.07505        0
+ per137  per137            2            2           OK       0.1521        0
+ per138  per138            2            2           OK      0.07505        0
+ per139  per139            2            2           OK       0.1521        0
+ per140  per140            2            0      PROBLEM       0.3834        0
+ per141  per141            2            2           OK      -0.3103        0
+ per142  per142            2            2           OK     -0.00203        0
+ per143  per143            2            2           OK      -0.2333        0
+ per144  per144            2            2           OK       0.1521        0
+ per145  per145            2            2           OK     -0.07911        0
+ per146  per146            2            2           OK       0.1521        0
+ per147  per147            2            2           OK     -0.07911        0
+ per148  per148            2            2           OK      0.07505        0
+ per149  per149            2            2           OK       0.1521        0
+ per150  per150            2            2           OK      -0.2333        0
+ per151  per151            2            2           OK      -0.2333        0
+ per152  per152            2            2           OK       0.1521        0
+ per153  per153            2            2           OK      -0.1562        0
+ per154  per154            2            2           OK       0.1521        0
+ per155  per155            2            2           OK     -0.07911        0
+ per156  per156            2            2           OK      -0.1562        0
+ per157  per157            2            2           OK      -0.2333        0
+ per158  per158            2            2           OK      0.07505        0
+ per159  per159            2            0      PROBLEM       0.2292        0
+ per160  per160            2            2           OK     -0.00203        0
+ per161  per161            2            0      PROBLEM       0.2292        0
+ per162  per162            2            2           OK     -0.00203        0
+ per163  per163            2            2           OK      -0.1562        0
+ per164  per164            2            2           OK     -0.07911        0
+ per165  per165            2            0      PROBLEM       0.2292        0
+ per166  per166            2            0      PROBLEM       0.3834        0
+ per167  per167            2            0      PROBLEM       0.3063        0
+ per168  per168            2            2           OK      0.07505        0
+ per169  per169            2            2           OK       0.1521        0
+ per170  per170            2            2           OK     -0.00203        0
+ per171  per171            2            2           OK      0.07505        0
+ per172  per172            2            2           OK     -0.07911        0
+ per173  per173            2            0      PROBLEM       0.5375        0
+ per174  per174            2            2           OK     -0.00203        0
+ per175  per175            2            2           OK       0.1521        0
+ per176  per176            2            0      PROBLEM       0.3834        0
+ per177  per177            2            2           OK     -0.00203        0
+ per178  per178            2            0      PROBLEM       0.3834        0
+ per179  per179            2            2           OK      -0.3103        0
+ per180  per180            2            0      PROBLEM       0.3063        0
+ per181  per181            2            0      PROBLEM       0.3063        0
+ per182  per182            2            2           OK     -0.00203        0
+ per183  per183            2            2           OK     -0.00203        0
+ per184  per184            2            2           OK     -0.00203        0
+ per185  per185            2            2           OK      0.07505        0
+ per186  per186            2            0      PROBLEM       0.2292        0
+ per187  per187            2            0      PROBLEM       0.3063        0
+ per188  per188            2            2           OK      -0.1562        0
+ per189  per189            2            2           OK       0.1521        0
+ per190  per190            2            2           OK     -0.07911        0
+ per191  per191            2            2           OK     -0.00203        0
+ per192  per192            2            2           OK     -0.00203        0
+ per193  per193            2            2           OK      -0.3874        0
+ per194  per194            2            2           OK     -0.07911        0
+ per195  per195            2            2           OK     -0.00203        0
+ per196  per196            2            2           OK     -0.07911        0
+ per197  per197            2            2           OK     -0.07911        0
+ per198  per198            2            2           OK      -0.2333        0
+ per199  per199            2            2           OK     -0.07911        0