Mercurial > repos > iuc > poretools_tabular

diff poretools_tabular.xml @ 2:5f5f1da94d7f draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/poretools commit 506782d1e671505617ff539e6811fcdcc2c02cd5
author iuc
date Fri, 27 Sep 2024 07:48:17 +0000
parents 7f0b324de883
children
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--- a/poretools_tabular.xml	Sun Jan 19 09:07:13 2020 -0500
+++ b/poretools_tabular.xml	Fri Sep 27 07:48:17 2024 +0000
@@ -1,9 +1,9 @@
-<?xml version="1.0"?>
-<tool id="poretools_tabular" name="Extract FASTQ" version="@VERSION@.0">
+<tool id="poretools_tabular" name="Extract FASTQ" version="@VERSION@.0" profile="@PROFILE@">
     <description>in tabular format from a set of FAST5 files</description>
     <macros>
         <import>macros.xml</import>
     </macros>
+    <expand macro="bio_tools"/>
     <expand macro="requirements" />
     <command detect_errors="aggressive">
     <![CDATA[
@@ -20,32 +20,27 @@
     <tests>
         <test>
             <expand macro="test_input" />
-            <param name="types" value="fwd" />
-            <param name="detailed" value="true" />
+            <param name="type" value="fwd" />
             <output name="output" file="poretools-tabular-out1.tabular" ftype="tabular" />
         </test>
         <test>
             <expand macro="test_input" />
-            <param name="types" value="rev" />
-            <param name="detailed" value="false" />
+            <param name="type" value="rev" />
             <output name="output" file="poretools-tabular-out2.tabular" ftype="tabular" />
         </test>
         <test>
             <expand macro="test_input" />
-            <param name="types" value="2D" />
-            <param name="detailed" value="true" />
+            <param name="type" value="2D" />
             <output name="output" file="poretools-tabular-out3.tabular" ftype="tabular" />
         </test>
         <test>
             <expand macro="test_input" />
-            <param name="types" value="best" />
-            <param name="detailed" value="false" />
+            <param name="type" value="best" />
             <output name="output" file="poretools-tabular-out4.tabular" ftype="tabular" />
         </test>
         <test>
             <expand macro="test_input" />
-            <param name="types" value="all" />
-            <param name="detailed" value="true" />
+            <param name="type" value="all" />
             <output name="output" file="poretools-tabular-out5.tabular" ftype="tabular" />
         </test>
     </tests>