# HG changeset patch # User iuc # Date 1737542076 0 # Node ID d305623d5f41db1944b71531f98a6e7dee5c9c51 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ppanggolin commit f51871dfce652ad0bbb9d4967d02338d03b9e2a3 diff -r 000000000000 -r d305623d5f41 macros.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/macros.xml Wed Jan 22 10:34:36 2025 +0000 @@ -0,0 +1,19 @@ + + 2.2.1 + 0 + + + 10.1371/journal.pcbi.1007732 + + + + + ppanggolin + + + + + ppanggolin + + + diff -r 000000000000 -r d305623d5f41 ppanggolin_msa.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/ppanggolin_msa.xml Wed Jan 22 10:34:36 2025 +0000 @@ -0,0 +1,155 @@ + + computes MSA of pangenome's gene families + + macros.xml + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + do_phylo is True + + + + + + + + + + + + + + + + + + + + + + + + + + + diff -r 000000000000 -r d305623d5f41 test-data/fasta/AP028611_984801_1194801.fasta.gz Binary file test-data/fasta/AP028611_984801_1194801.fasta.gz has changed diff -r 000000000000 -r d305623d5f41 test-data/fasta/CP107038_1022972_1232972.fasta.gz Binary file test-data/fasta/CP107038_1022972_1232972.fasta.gz has changed diff -r 000000000000 -r d305623d5f41 test-data/fasta/CP113115_1290693_1440693.fasta.gz Binary file test-data/fasta/CP113115_1290693_1440693.fasta.gz has changed diff -r 000000000000 -r d305623d5f41 test-data/fasta/LN831051_1254175_1464175.fasta.gz Binary file test-data/fasta/LN831051_1254175_1464175.fasta.gz has changed diff -r 000000000000 -r d305623d5f41 test-data/fasta/NC_012467_959209_1169209.fasta.gz Binary file test-data/fasta/NC_012467_959209_1169209.fasta.gz has changed diff -r 000000000000 -r d305623d5f41 test-data/genbank/AP028611_984801_1194801.gb.gz Binary file test-data/genbank/AP028611_984801_1194801.gb.gz has changed diff -r 000000000000 -r d305623d5f41 test-data/genbank/CP107038_1022972_1232972.gb.gz Binary file test-data/genbank/CP107038_1022972_1232972.gb.gz has changed diff -r 000000000000 -r d305623d5f41 test-data/genbank/CP113115_1290693_1440693.gb.gz Binary file test-data/genbank/CP113115_1290693_1440693.gb.gz has changed diff -r 000000000000 -r d305623d5f41 test-data/genbank/LN831051_1254175_1464175.gb.gz Binary file test-data/genbank/LN831051_1254175_1464175.gb.gz has changed diff -r 000000000000 -r d305623d5f41 test-data/genbank/NC_012467_959209_1169209.gb.gz Binary file test-data/genbank/NC_012467_959209_1169209.gb.gz has changed diff -r 000000000000 -r d305623d5f41 test-data/h5/test_data.h5 Binary file test-data/h5/test_data.h5 has changed