Mercurial > repos > iuc > presto_buildconsensus
comparison presto_macros.xml @ 2:5b059629cce0 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/presto commit 19e832988729a92be5426131fc6114e1f7237982"
| author | iuc |
|---|---|
| date | Fri, 02 Jul 2021 15:32:25 +0000 |
| parents | 379f74eae0ab |
| children | 1844a3d2c887 |
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| 1:379f74eae0ab | 2:5b059629cce0 |
|---|---|
| 3 <citations> | 3 <citations> |
| 4 <citation type="doi">10.1093/bioinformatics/btu138</citation> | 4 <citation type="doi">10.1093/bioinformatics/btu138</citation> |
| 5 <yield /> | 5 <yield /> |
| 6 </citations> | 6 </citations> |
| 7 </xml> | 7 </xml> |
| 8 | |
| 9 <token name="@TOOL_VERSION@">0.6.2</token> | |
| 8 | 10 |
| 9 <xml name="requirements"> | 11 <xml name="requirements"> |
| 10 <requirements> | 12 <requirements> |
| 11 <requirement type="package" version="0.6.2">presto</requirement> | 13 <requirement type="package" version="@TOOL_VERSION@">presto</requirement> |
| 12 </requirements> | 14 </requirements> |
| 13 </xml> | 15 </xml> |
| 14 | 16 |
| 15 <xml name="presto-coord-param"> | 17 <xml name="presto-coord-param"> |
| 16 <param argument="--coord" type="select" value="presto" label="Coordinate" help="The format of the sequence identifier which defines shared coordinate information across mate pairs."> | 18 <param argument="--coord" type="select" value="presto" label="Coordinate" help="The format of the sequence identifier which defines shared coordinate information across mate pairs."> |
| 36 <validator type="regex" message="Value may include alphanumeric characters, underscores and spaces.">[A-Za-z0-9_ ]+</validator> | 38 <validator type="regex" message="Value may include alphanumeric characters, underscores and spaces.">[A-Za-z0-9_ ]+</validator> |
| 37 </xml> | 39 </xml> |
| 38 | 40 |
| 39 <token name="@PRESTO_URL_BASE@">https://presto.readthedocs.io</token> | 41 <token name="@PRESTO_URL_BASE@">https://presto.readthedocs.io</token> |
| 40 | 42 |
| 41 <!-- When modifying this file ensure that the version here matches the version above in requirements. --> | |
| 42 <token name="@PRESTO_VERSION@">0.5.4</token> | |
| 43 | |
| 44 <token name="@HELP_NOTE@"><![CDATA[ | 43 <token name="@HELP_NOTE@"><![CDATA[ |
| 45 | 44 |
| 46 ==== | 45 ==== |
| 47 | 46 |
| 48 **Note about limitations of pRESTO tools within Galaxy:** | 47 **Note about limitations of pRESTO tools within Galaxy:** |