Mercurial > repos > iuc > proteinortho_grab_proteins
comparison proteinortho_macros.xml @ 5:a87f7278b4ee draft
planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 84c463c8317d7c16c2b86b1d8657932cc0f39791
| author | iuc |
|---|---|
| date | Tue, 22 Nov 2022 16:51:10 +0000 |
| parents | d5e4450964f8 |
| children | e2a8e134e928 |
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| 4:d5e4450964f8 | 5:a87f7278b4ee |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <macros> | 2 <macros> |
| 3 <token name="@TOOL_VERSION@">6.0.32</token> | 3 <token name="@TOOL_VERSION@">6.1.2</token> |
| 4 <token name="@WRAPPER_VERSION@">0</token> | 4 <token name="@WRAPPER_VERSION@">1</token> |
| 5 <token name="@PROFILE@">20.09</token> | 5 <token name="@PROFILE@">20.09</token> |
| 6 <xml name="citations"> | 6 <xml name="citations"> |
| 7 <citations> | 7 <citations> |
| 8 <citation type="doi">10.1186/1471-2105-12-124</citation> | 8 <citation type="doi">10.1186/1471-2105-12-124</citation> |
| 9 <citation type="doi">10.1371/journal.pone.0105015</citation> | 9 <citation type="doi">10.1371/journal.pone.0105015</citation> |
| 12 <xml name="requirements"> | 12 <xml name="requirements"> |
| 13 <requirements> | 13 <requirements> |
| 14 <requirement type="package" version="@TOOL_VERSION@">proteinortho</requirement> | 14 <requirement type="package" version="@TOOL_VERSION@">proteinortho</requirement> |
| 15 <!-- blast, blat, and last are not in the biopython requirements | 15 <!-- blast, blat, and last are not in the biopython requirements |
| 16 diamond is, but latest version does not work: https://gitlab.com/paulklemm_PHD/proteinortho/-/issues/55 --> | 16 diamond is, but latest version does not work: https://gitlab.com/paulklemm_PHD/proteinortho/-/issues/55 --> |
| 17 <requirement type="package" version="2.0.9">diamond</requirement> | 17 <requirement type="package" version="2.0.15">diamond</requirement> |
| 18 <requirement type="package" version="2.12.0">blast</requirement> | 18 <requirement type="package" version="2.13.0">blast</requirement> |
| 19 <requirement type="package" version="36">blat</requirement> | 19 <requirement type="package" version="377">ucsc-blat</requirement> |
| 20 <requirement type="package" version="1257">last</requirement> | 20 <requirement type="package" version="1418">last</requirement> |
| 21 </requirements> | 21 </requirements> |
| 22 </xml> | 22 </xml> |
| 23 <xml name="version_command"> | 23 <xml name="version_command"> |
| 24 <version_command>proteinortho -v</version_command> | 24 <version_command>proteinortho -v</version_command> |
| 25 </xml> | 25 </xml> |