Mercurial > repos > iuc > proteinortho_grab_proteins

comparison proteinortho_macros.xml @ 1:fa2d1e652ec1 draft

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"planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 95f1ae4ed1cdd56114df76d215f9e1ed549aa4c5"
author iuc
date Tue, 14 Sep 2021 11:39:49 +0000
parents d348c3a151d9
children 6eec1c6410fe
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0:d348c3a151d9 1:fa2d1e652ec1
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <macros> 2 <macros>
3 <token name="@TOOL_VERSION@">6.0.14</token> 3 <token name="@TOOL_VERSION@">6.0.31</token>
4 <token name="@WRAPPER_VERSION@">2.9.1</token> 4 <token name="@WRAPPER_VERSION@">0</token>
5 <token name="@PROFILE@">20.09</token>
5 <xml name="citations"> 6 <xml name="citations">
6 <citations> 7 <citations>
7 <citation type="doi">10.1186/1471-2105-12-124</citation> 8 <citation type="doi">10.1186/1471-2105-12-124</citation>
8 <citation type="doi">10.1371/journal.pone.0105015</citation> 9 <citation type="doi">10.1371/journal.pone.0105015</citation>
9 </citations> 10 </citations>
10 </xml> 11 </xml>
11 <xml name="requirements"> 12 <xml name="requirements">
12 <requirements> 13 <requirements>
13 <requirement type="package" version="@TOOL_VERSION@">proteinortho</requirement> 14 <requirement type="package" version="@TOOL_VERSION@">proteinortho</requirement>
14 <requirement type="package">diamond</requirement> 15 <!-- blast, blat, and last are not in the biopython requirements
15 <requirement type="package">blast</requirement> 16 diamond is, but latest version does not work: https://gitlab.com/paulklemm_PHD/proteinortho/-/issues/55 -->
16 <requirement type="package">blat</requirement> 17 <requirement type="package" version="2.0.9">diamond</requirement>
17 <requirement type="package">last</requirement> 18 <requirement type="package" version="2.12.0">blast</requirement>
19 <requirement type="package" version="36">blat</requirement>
20 <requirement type="package" version="1256">last</requirement>
18 </requirements> 21 </requirements>
19 </xml> 22 </xml>
20 <xml name="version_command"> 23 <xml name="version_command">
21 <version_command>proteinortho -v</version_command> 24 <version_command>proteinortho -v</version_command>
22 </xml> 25 </xml>