Mercurial > repos > iuc > pycoqc
changeset 2:dc1500f42073 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pycoqc commit 6bada3b3ee8791dd7fc2689f8a6023313cb4a0c4
| author | iuc |
|---|---|
| date | Mon, 25 Sep 2023 08:29:11 +0000 |
| parents | 3a2f2e24c37e |
| children | fae03f3d4bf7 |
| files | macros.xml pycoqc.xml |
| diffstat | 2 files changed, 8 insertions(+), 6 deletions(-) [+] |
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--- a/macros.xml Thu Mar 11 16:25:17 2021 +0000 +++ b/macros.xml Mon Sep 25 08:29:11 2023 +0000 @@ -25,6 +25,6 @@ *pycoqc* computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data. ]]></token> <token name="@REFERENCES@"><![CDATA[ -More information are available on the `website <https://tleonardi.github.io/pycoQC/>`_. +More information are available on the `pycoQC website <https://a-slide.github.io/pycoQC/>`_. ]]></token> </macros>
--- a/pycoqc.xml Thu Mar 11 16:25:17 2021 +0000 +++ b/pycoqc.xml Mon Sep 25 08:29:11 2023 +0000 @@ -1,6 +1,8 @@ <?xml version="1.0"?> <tool id="pycoqc" name="Pycoqc" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@"> - <description></description> + <description> + quality control for Nanopore sequencing data + </description> <macros> <import>macros.xml</import> </macros> @@ -20,15 +22,15 @@ #end if --min_barcode_percent '$min_barcode_percent' --report_title '$report_title' -## TODO in future - --template_file -## TODO in future - --config_file +## can be implemented in future - --template_file +## can be implemented in future - --config_file #if $skip_coverage_plot '$skip_coverage_plot' #end if --sample '$sample' -## TODO in future --default_config +## can be implemented in future --default_config --summary_file '$summary_file' -## TODO in future --barcode_file +## can be implemented in future --barcode_file #if $bam_file: --bam_file '$bam_file' #end if