Mercurial > repos > iuc > pygenometracks

annotate macros.xml @ 6:5cec5fb749f0 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit d5b42c5571c64be9fcfe515e79210cbf4c75beaf"
author iuc
date Tue, 11 Feb 2020 10:20:24 -0500
parents eca03db4f612
children 326a3db8d9d1
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2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
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1 <macros>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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2 <token name="@THREADS@">\${GALAXY_SLOTS:-4}</token>
5
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
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3 <token name="@WRAPPER_VERSION@">3.2.1</token>
0
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
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4 <xml name="requirements">
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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5 <requirements>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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6 <requirement type="package" version="@WRAPPER_VERSION@">pygenometracks</requirement>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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7 <yield />
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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8 </requirements>
2
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
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9 <version_command><![CDATA[@BINARY@ --version | tail -n 1 ]]></version_command>
0
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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10 </xml>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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11
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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12 <xml name="citations">
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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13 <citations>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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14 <citation type="doi">10.5281/zenodo.1133705</citation>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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15 <yield />
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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16 </citations>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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17 </xml>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
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18
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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19 <xml name="colormap">
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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20 <param argument="--colorMap" name="colormap" type="select" optional="True" label="Color map to use for the heatmap" help=" Available color map names can be found here: https://matplotlib.org/examples/color/colormaps_reference.html">
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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21 <option value="RdYlBu">RdYlBu</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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22 <option value="Accent">Accent</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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23 <option value="Spectral">Spectral</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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24 <option value="Set1">Set1</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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25 <option value="Set2">Set2</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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26 <option value="Set3">Set3</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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27 <option value="Dark2">Dark2</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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28 <option value="Reds">Reds</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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29 <option value="Oranges">Oranges</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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30 <option value="Greens">Greens</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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31 <option value="Blues">Blues</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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32 <option value="Greys">Greys</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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33 <option value="Purples">Purples</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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34 <option value="Paired">Paired</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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35 <option value="Pastel1">Pastel1</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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36 <option value="Pastel2">Pastel2</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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37 <option value="spring">spring</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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38 <option value="summer">summer</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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39 <option value="autumn">autumn</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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40 <option value="winter">winter</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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41 <option value="hot">hot</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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42 <option value="coolwarm">coolwarm</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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43 <option value="cool">cool</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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44 <option value="seismic">seismic</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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45 <option value="terrain">terrain</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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46 <option value="ocean">ocean</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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47 <option value="rainbow">rainbow</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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48 <option value="bone">bone</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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49 <option value="flag">flag</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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50 <option value="prism">prism</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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51 <option value="cubehelix">cubehelix</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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52 <option value="binary">binary</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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53 <option value="pink">pink</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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54 <option value="gray">gray</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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55 <option value="copper">copper</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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56 <option value="BrBG">BrBG</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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57 <option value="BuGn">BuGn</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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58 <option value="BuPu">BuPu</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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59 <option value="GnBu">GnBu</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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60 <option value="OrRd">OrRd</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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61 <option value="PiYG">PiYG</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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62 <option value="PRGn">PRGn</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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63 <option value="PuOr">PuOr</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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64 <option value="PuRd">PuRd</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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65 <option value="PuBu">PuBu</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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66 <option value="RdBu">RdBu</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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67 <option value="RdGy">RdGy</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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68 <option value="RdPu">RdPu</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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69 <option value="YlGn">YlGn</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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70 <option value="PuBuGn">PuBuGn</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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71 <option value="RdYlGn">RdYlGn</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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72 <option value="YlGnBu">YlGnBu</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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73 <option value="YlOrBr">YlOrBr</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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74 <option value="YlOrRd">YlOrRd</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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75 <option value="gist_gray">gist_gray</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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76 <option value="gist_stern">gist_stern</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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77 <option value="gist_earth">gist_earth</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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78 <option value="gist_yarg">gist_yarg</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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79 <option value="gist_ncar">gist_ncar</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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80 <option value="gist_rainbow">gist_rainbow</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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81 <option value="gist_heat">gist_heat</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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82 <option value="gnuplot">gnuplot</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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83 <option value="gnuplot2">gnuplot2</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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84 <option value="CMRmap">CMRmap</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
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85 <option value="bwr">bwr</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
86 <option value="hsv">hsv</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
87 <option value="brg">brg</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
88 <option value="jet">jet</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
89 <option value="afmhot">afmhot</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
90 <option value="Accent_r">Accent reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
91 <option value="Spectral_r">Spectral reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
92 <option value="Set1_r">Set1 reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
93 <option value="Set2_r">Set2 reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
94 <option value="Set3_r">Set3 reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
95 <option value="Dark2_r">Dark2 reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
96 <option value="Reds_r">Reds reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
97 <option value="Oranges_r">Oranges reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
98 <option value="Greens_r">Greens reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
99 <option value="Blues_r">Blues reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
100 <option value="Greys_r">Greys reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
101 <option value="Purples_r">Purples reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
102 <option value="Paired_r">Paired reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
103 <option value="Pastel1_r">Pastel1 reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
104 <option value="Pastel2_r">Pastel2 reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
105 <option value="spring_r">spring reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
106 <option value="summer_r">summer reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
107 <option value="autumn_r">autumn reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
108 <option value="winter_r">winter reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
109 <option value="hot_r">hot reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
110 <option value="coolwarm_r">coolwarm reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
111 <option value="cool_r">cool reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
112 <option value="seismic_r">seismic reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
113 <option value="terrain_r">terrain reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
114 <option value="ocean_r">ocean reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
115 <option value="rainbow_r">rainbow reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
116 <option value="bone_r">bone reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
117 <option value="flag_r">flag reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
118 <option value="prism_r">prism reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
119 <option value="cubehelix_r">cubehelix reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
120 <option value="binary_r">binary reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
121 <option value="pink_r">pink reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
122 <option value="gray_r">gray reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
123 <option value="copper_r">copper reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
124 <option value="BrBG_r">BrBG reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
125 <option value="BuGn_r">BuGn reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
126 <option value="BuPu_r">BuPu reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
127 <option value="GnBu_r">GnBu reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
128 <option value="OrRd_r">OrRd reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
129 <option value="PiYG_r">PiYG reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
130 <option value="PRGn_r">PRGn reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
131 <option value="PuOr_r">PuOr reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
132 <option value="PuRd_r">PuRd reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
133 <option value="PuBu_r">PuBu reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
134 <option value="RdBu_r">RdBu reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
135 <option value="RdGy_r">RdGy reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
136 <option value="RdPu_r">RdPu reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
137 <option value="YlGn_r">YlGn reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
138 <option value="PuBuGn_r">PuBuGn reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
139 <option value="RdYlBu_r" selected="True">RdYlBu reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
140 <option value="RdYlGn_r">RdYlGn reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
141 <option value="YlGnBu_r">YlGnBu reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
142 <option value="YlOrBr_r">YlOrBr reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
143 <option value="YlOrRd_r">YlOrRd reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
144 <option value="gist_gray_r">gist_gray reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
145 <option value="gist_stern_r">gist_stern reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
146 <option value="gist_earth_r">gist_earth reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
147 <option value="gist_yarg_r">gist_yarg reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
148 <option value="gist_ncar_r">gist_ncar reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
149 <option value="gist_rainbow_r">gist_rainbow reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
150 <option value="gist_heat_r">gist_heat reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
151 <option value="gnuplot_r">gnuplot reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
152 <option value="gnuplot2_r">gnuplot2 reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
153 <option value="CMRmap_r">CMRmap reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
154 <option value="bwr_r">bwr reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
155 <option value="hsv_r">hsv reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
156 <option value="brg_r">brg reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
157 <option value="jet_r">jet reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
158 <option value="afmhot_r">afmhot reversed</option>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
159 </param>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
160 </xml>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
161
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
162 <xml name="region">
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
163 <param argument="--region" type="text" label="Region of the genome to limit the operation"
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
164 help="The format is chr:start-end. Also valid is just to specify a chromosome, for example chr10:10-500" />
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
165 </xml>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
166
5
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
167 <xml name="matrix_h5_cooler_multiple_macro">
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
168 <param name="matrix_h5_cooler_multiple" type="data" format="h5,cool"
0
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
169 label="Matricies to compute on" multiple="true"/>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
170 </xml>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
171 <token name="@REFERENCES@">
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172
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173 .. class:: infomark
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174
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175 For more information on the tools, please visit our `help site`_.
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176
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177 If you would like to give us feedback or you run into any trouble, please send an email to deeptools@googlegroups.com
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
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178
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179 This tool is developed by the `Bioinformatics and Deep-Sequencing Unit`_ at the `Max Planck Institute for
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
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180 Immunobiology and Epigenetics`_.
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181
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182 .. _Bioinformatics and Deep-Sequencing Unit: http://www3.ie-freiburg.mpg.de/facilities/research-facilities/bioinformatics-and-deep-sequencing-unit/
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183 .. _Max Planck Institute for Immunobiology and Epigenetics: http://www3.ie-freiburg.mpg.de
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184 .. _help site: https://github.com/deeptools/pyGenomeTracks
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185
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186 </token>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
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187
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188 <xml name="track_input_bed_macro">
5
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
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189 <param name="track_input_bed" type="data" format="bed" label="Track file bed format" multiple="True"/>
0
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190 </xml>
2
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191 <xml name="track_input_bed_gtf_macro">
5
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192 <param name="track_input_bed" type="data" format="bed,gtf" label="Track file bed or gtf format" multiple="True"/>
2
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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193 </xml>
4
c237ba772225 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 13ae6af8549174610888bfd8062384898c629af3"
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194 <xml name="track_input_narrow_peak_macro">
5
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195 <param name="track_input_narrow_peak" type="data" format="encodepeak,bed" label="Track file encodepeak or format" multiple="True"/>
4
c237ba772225 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 13ae6af8549174610888bfd8062384898c629af3"
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196 </xml>
0
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197 <xml name="track_input_bed_single_macro">
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198 <param name="track_input_bed_single" type="data" format="bed" label="Track file bed format"/>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
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199 </xml>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
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200 <xml name="track_input_bedgraph_macro">
5
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
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201 <param name="track_input_bedgraph" type="data" format="bedgraph" label="Track file bedgraph format" multiple="True"/>
0
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
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202 </xml>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
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203 <xml name="track_input_bigwig_macro">
5
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
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204 <param name="track_input_bigwig" type="data" format="bigwig" label="Track file bigwig format" multiple="True"/>
0
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
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205 </xml>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
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206 <xml name="track_input_bedgraph_matrix_macro">
5
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
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207 <param name="track_input_bedgraph_matrix" type="data" format="bedgraph" label="Track file bigwig format" multiple="True"/>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
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208 </xml>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
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209 <xml name="track_input_link_macro">
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
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210 <param name="track_input_link" type="data" format="bed,interval" label="Track file for links" multiple="False"/>
0
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211 </xml>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
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212 <xml name="plot_title">
5
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213 <param name="title" type="text" optional="true" label="Plot title" multiple="True"/>
0
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214 </xml>
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
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215 <xml name="spacer_macro">
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
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216 <param name="spacer_height" type="float" value="" optional="True"
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217 label="Include spacer at the end of the track" help="Height of the spacer." />
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218 </xml>
2
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219 <xml name="inverted_macro">
5
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220 <param name="invert_orientation" type="boolean" truevalue="true" falsevalue="false" checked="false"
2
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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221 label="Invert the track" />
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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222 </xml>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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223 <xml name="color_bed_macro">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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224 <conditional name="color_bed">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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225 <param name="color_bed_select" type="select" label="Use color:">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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226 <option value="manually" selected="True">manually</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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227 <option value="bed_rgb">From the 9th field</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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228 <option value="colormap">From the 5th field (score)</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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229 </param>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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230 <when value="manually">
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231 <param name="color" type="color" value="#000000" label="Color of track" optional="True" />
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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232 </when>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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233 <when value="bed_rgb" />
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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234 <when value="colormap">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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235 <param name="color" type="select" label="Color map to use for the scores" help=" Available color map names can be found here: https://matplotlib.org/examples/color/colormaps_reference.html">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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236 <option value="RdYlBu">RdYlBu</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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237 <option value="Accent">Accent</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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238 <option value="Spectral">Spectral</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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239 <option value="Set1">Set1</option>
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240 <option value="Set2">Set2</option>
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241 <option value="Set3">Set3</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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242 <option value="Dark2">Dark2</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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243 <option value="Reds">Reds</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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244 <option value="Oranges">Oranges</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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245 <option value="Greens">Greens</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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246 <option value="Blues">Blues</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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247 <option value="Greys">Greys</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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248 <option value="Purples">Purples</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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249 <option value="Paired">Paired</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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250 <option value="Pastel1">Pastel1</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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251 <option value="Pastel2">Pastel2</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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252 <option value="spring">spring</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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253 <option value="summer">summer</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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254 <option value="autumn">autumn</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
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parents: 0
diff changeset
255 <option value="winter">winter</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
256 <option value="hot">hot</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
257 <option value="coolwarm">coolwarm</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
258 <option value="cool">cool</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
259 <option value="seismic">seismic</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
260 <option value="terrain">terrain</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
261 <option value="ocean">ocean</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
262 <option value="rainbow">rainbow</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
263 <option value="bone">bone</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
264 <option value="flag">flag</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
265 <option value="prism">prism</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
266 <option value="cubehelix">cubehelix</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
267 <option value="binary">binary</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
268 <option value="pink">pink</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
269 <option value="gray">gray</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
270 <option value="copper">copper</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
271 <option value="BrBG">BrBG</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
272 <option value="BuGn">BuGn</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
273 <option value="BuPu">BuPu</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
274 <option value="GnBu">GnBu</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
275 <option value="OrRd">OrRd</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
276 <option value="PiYG">PiYG</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
277 <option value="PRGn">PRGn</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
278 <option value="PuOr">PuOr</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
279 <option value="PuRd">PuRd</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
280 <option value="PuBu">PuBu</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
281 <option value="RdBu">RdBu</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
282 <option value="RdGy">RdGy</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
283 <option value="RdPu">RdPu</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
284 <option value="YlGn">YlGn</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
285 <option value="PuBuGn">PuBuGn</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
286 <option value="RdYlGn">RdYlGn</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
287 <option value="YlGnBu">YlGnBu</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
288 <option value="YlOrBr">YlOrBr</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
289 <option value="YlOrRd">YlOrRd</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
290 <option value="gist_gray">gist_gray</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
291 <option value="gist_stern">gist_stern</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
292 <option value="gist_earth">gist_earth</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
293 <option value="gist_yarg">gist_yarg</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
294 <option value="gist_ncar">gist_ncar</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
295 <option value="gist_rainbow">gist_rainbow</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
296 <option value="gist_heat">gist_heat</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
297 <option value="gnuplot">gnuplot</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
298 <option value="gnuplot2">gnuplot2</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
299 <option value="CMRmap">CMRmap</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
300 <option value="bwr">bwr</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
301 <option value="hsv">hsv</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
302 <option value="brg">brg</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
303 <option value="jet">jet</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
304 <option value="afmhot">afmhot</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
305 <option value="Accent_r">Accent reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
306 <option value="Spectral_r">Spectral reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
307 <option value="Set1_r">Set1 reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
308 <option value="Set2_r">Set2 reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
309 <option value="Set3_r">Set3 reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
310 <option value="Dark2_r">Dark2 reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
311 <option value="Reds_r">Reds reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
312 <option value="Oranges_r">Oranges reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
313 <option value="Greens_r">Greens reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
314 <option value="Blues_r">Blues reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
315 <option value="Greys_r">Greys reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
316 <option value="Purples_r">Purples reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
317 <option value="Paired_r">Paired reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
318 <option value="Pastel1_r">Pastel1 reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
319 <option value="Pastel2_r">Pastel2 reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
320 <option value="spring_r">spring reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
321 <option value="summer_r">summer reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
322 <option value="autumn_r">autumn reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
323 <option value="winter_r">winter reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
324 <option value="hot_r">hot reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
325 <option value="coolwarm_r">coolwarm reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
326 <option value="cool_r">cool reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
327 <option value="seismic_r">seismic reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
328 <option value="terrain_r">terrain reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
329 <option value="ocean_r">ocean reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
330 <option value="rainbow_r">rainbow reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
331 <option value="bone_r">bone reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
332 <option value="flag_r">flag reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
333 <option value="prism_r">prism reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
334 <option value="cubehelix_r">cubehelix reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
335 <option value="binary_r">binary reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
336 <option value="pink_r">pink reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
337 <option value="gray_r">gray reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
338 <option value="copper_r">copper reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
339 <option value="BrBG_r">BrBG reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
340 <option value="BuGn_r">BuGn reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
341 <option value="BuPu_r">BuPu reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
342 <option value="GnBu_r">GnBu reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
343 <option value="OrRd_r">OrRd reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
344 <option value="PiYG_r">PiYG reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
345 <option value="PRGn_r">PRGn reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
346 <option value="PuOr_r">PuOr reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
347 <option value="PuRd_r">PuRd reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
348 <option value="PuBu_r">PuBu reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
349 <option value="RdBu_r">RdBu reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
350 <option value="RdGy_r">RdGy reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
351 <option value="RdPu_r">RdPu reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
352 <option value="YlGn_r">YlGn reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
353 <option value="PuBuGn_r">PuBuGn reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
354 <option value="RdYlBu_r" selected="True">RdYlBu reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
355 <option value="RdYlGn_r">RdYlGn reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
356 <option value="YlGnBu_r">YlGnBu reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
357 <option value="YlOrBr_r">YlOrBr reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
358 <option value="YlOrRd_r">YlOrRd reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
359 <option value="gist_gray_r">gist_gray reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
360 <option value="gist_stern_r">gist_stern reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
361 <option value="gist_earth_r">gist_earth reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
362 <option value="gist_yarg_r">gist_yarg reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
363 <option value="gist_ncar_r">gist_ncar reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
364 <option value="gist_rainbow_r">gist_rainbow reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
365 <option value="gist_heat_r">gist_heat reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
366 <option value="gnuplot_r">gnuplot reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
367 <option value="gnuplot2_r">gnuplot2 reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
368 <option value="CMRmap_r">CMRmap reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
369 <option value="bwr_r">bwr reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
370 <option value="hsv_r">hsv reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
371 <option value="brg_r">brg reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
372 <option value="jet_r">jet reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
373 <option value="afmhot_r">afmhot reversed</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
374 </param>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
375 </when>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
376 </conditional>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
377 <param name="border_color" type="color" value="#000000" label="Border color" optional="True" />
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
378 </xml>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
379 <xml name="color_coverage_macro">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
380 <param name="color" type="color" value="#000000" label="Color of track" optional="True" />
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
381 <param name="alpha" type="float" value="1" min="0" max="1" label="level of transparency (alpha)" help="1 is opaque and 0 is totally transparent"/>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
382 <conditional name="color_negative">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
383 <param name="color_negative_select" type="select" label="Use a different color for negative values">
5
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
384 <option value="false" selected="True">No</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
385 <option value="true">Yes</option>
2
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
386 </param>
5
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
387 <when value="false" />
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
388 <when value="true">
2
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
389 <param name="color" type="color" value="#000000" label="Color of negative values" optional="True" />
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
390 </when>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
391 </conditional>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
392 </xml>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
393 <xml name="overlay_macro">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
394 <param name="overlay_select" type="select" label="Overlay this track with the previous one:">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
395 <option value="no" selected="True">No</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
396 <option value="yes">Yes</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
397 <option value="share-y">Yes and keep same y axis</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
398 </param>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
399 </xml>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
400 <xml name="type_coverage_macro">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
401 <conditional name="type_conditional">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
402 <param name="type_selector" type="select" label="Choose style of the plot.">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
403 <option value="fill_option">fill</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
404 <option value="line_option">line</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
405 <option value="point_option">point</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
406 </param>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
407 <when value="line_option">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
408 <param name="width_line" type="float" value="0.5" optional="True" label="Width"/>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
409 </when>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
410 <when value="point_option">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
411 <param name="width_point" type="float" value="0.5" optional="True" label="Width"/>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
412 </when>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
413 <when value="fill_option" />
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
414 </conditional>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
415 </xml>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
416 <xml name="minmax_macro">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
417 <param name="min_value" type="float" value="" optional="True" label="Minimum value"/>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
418 <param name="max_value" type="float" value="" optional="True" label="Maximum value"/>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
419 </xml>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
420 <xml name="reading_bw_macro">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
421 <section name="reading_bw_conditional" title="Configure bigwig parameters" expanded="False">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
422 <param name="summary" type="select" label="Summary method">
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
423 <option value="mean" selected="True">mean=mean value</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
424 <option value="min">min=minimum value</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
425 <option value="max">max=maximum value</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
426 <option value="coverage">coverage=number of covered bases</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
427 <option value="std">std=standard deviation</option>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
428 </param>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
429 <param name="number_of_bins" type="integer" value="" optional="True" label="Number of bins" />
5
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
430 <param name="nans_to_zeros" type="boolean" truevalue="true" falsevalue="false" checked="false"
2
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
431 label="NAN's to zeros" />
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
432 </section>
c171f2b7d76e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 11b5b3cc8b846cc75623a3ef265afe8c68747f2e"
iuc
parents: 0
diff changeset
433 </xml>
5
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
434 <xml name="bed_advanced_macro">
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
435 <section name="bed_advanced" title="Configure other bed parameters" expanded="False">
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
436 <param name="global_max_row" type="boolean" truevalue="true" falsevalue="false" checked="false"
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
437 label="Global max rows" />
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
438 <param name="gene_rows" type="integer" value="" optional="True" label="Maximum number of gene rows" />
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
439 <param name="max_labels" type="integer" value="60" label="Maximum number of gene labels to display" />
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
440 <param name="line_width" type="float" value="0.5" label="width of lines" />
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
441 <section name ="flybase" title="When using flybase style" expanded="False">
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
442 <param name="height_utr" type="float" value="1" min="0" max="1" label="relative height of UTR regions compared to coding regions in flybase style"/>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
443 <param name="color_utr" type="color" value="grey" label="Color of UTR regions"/>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
444 </section>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
445 <section name ="ucsc" title="When using UCSC style" expanded="False">
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
446 <param name="arrow_interval" type="integer" value="2" min="0" label="interval between 2 arrows on introns in UCSC style"/>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
447 </section>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
448 <section name ="gtf" title="When using gtf as input" expanded="False">
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
449 <param name="prefered_name" type="text" value="transcript_name" label="attribute to use as label"
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
450 help="Usually transcript_name or gene_name"/>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
451 <param name="merge_transcripts" type="boolean" truevalue="true" falsevalue="false" checked="false"
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
452 label="Merge all transcripts of each gene in a single entry" />
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
453 </section>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
454 </section>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
455 </xml>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
456 <xml name="lines_macro">
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
457 <param name="alpha" type="float" value="1" min="0" max="1" label="level of transparency (alpha)" help="1 is opaque and 0 is totally transparent"/>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
458 <param name="line_width" type="float" value="0.5" label="width of line(s)" optional="True"/>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
459 <param name="line_style" type="select" label="Style of the line(s)">
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
460 <option value="solid" selected="True">Solid</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
461 <option value="dashed">Dashed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
462 <option value="dotted">Dotted</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
463 <option value="dashdot">Dashdot</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
464 </param>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
465 </xml>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
466 <xml name="links_color_macro">
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
467 <conditional name="color_link">
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
468 <param name="color_link_select" type="select" label="Use color:">
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
469 <option value="manually" selected="True">manually</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
470 <option value="colormap">From the 7th field (score)</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
471 </param>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
472 <when value="manually">
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
473 <param name="color" type="color" value="#000000" label="Color of track" optional="True" />
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
474 </when>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
475 <when value="colormap">
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
476 <param name="color" type="select" label="Color map to use for the scores" help=" Available color map names can be found here: https://matplotlib.org/examples/color/colormaps_reference.html">
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
477 <option value="RdYlBu">RdYlBu</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
478 <option value="Accent">Accent</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
479 <option value="Spectral">Spectral</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
480 <option value="Set1">Set1</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
481 <option value="Set2">Set2</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
482 <option value="Set3">Set3</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
483 <option value="Dark2">Dark2</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
484 <option value="Reds">Reds</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
485 <option value="Oranges">Oranges</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
486 <option value="Greens">Greens</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
487 <option value="Blues">Blues</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
488 <option value="Greys">Greys</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
489 <option value="Purples">Purples</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
490 <option value="Paired">Paired</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
491 <option value="Pastel1">Pastel1</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
492 <option value="Pastel2">Pastel2</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
493 <option value="spring">spring</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
494 <option value="summer">summer</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
495 <option value="autumn">autumn</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
496 <option value="winter">winter</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
497 <option value="hot">hot</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
498 <option value="coolwarm">coolwarm</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
499 <option value="cool">cool</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
500 <option value="seismic">seismic</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
501 <option value="terrain">terrain</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
502 <option value="ocean">ocean</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
503 <option value="rainbow">rainbow</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
504 <option value="bone">bone</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
505 <option value="flag">flag</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
506 <option value="prism">prism</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
507 <option value="cubehelix">cubehelix</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
508 <option value="binary">binary</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
509 <option value="pink">pink</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
510 <option value="gray">gray</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
511 <option value="copper">copper</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
512 <option value="BrBG">BrBG</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
513 <option value="BuGn">BuGn</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
514 <option value="BuPu">BuPu</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
515 <option value="GnBu">GnBu</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
516 <option value="OrRd">OrRd</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
517 <option value="PiYG">PiYG</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
518 <option value="PRGn">PRGn</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
519 <option value="PuOr">PuOr</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
520 <option value="PuRd">PuRd</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
521 <option value="PuBu">PuBu</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
522 <option value="RdBu">RdBu</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
523 <option value="RdGy">RdGy</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
524 <option value="RdPu">RdPu</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
525 <option value="YlGn">YlGn</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
526 <option value="PuBuGn">PuBuGn</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
527 <option value="RdYlGn">RdYlGn</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
528 <option value="YlGnBu">YlGnBu</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
529 <option value="YlOrBr">YlOrBr</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
530 <option value="YlOrRd">YlOrRd</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
531 <option value="gist_gray">gist_gray</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
532 <option value="gist_stern">gist_stern</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
533 <option value="gist_earth">gist_earth</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
534 <option value="gist_yarg">gist_yarg</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
535 <option value="gist_ncar">gist_ncar</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
536 <option value="gist_rainbow">gist_rainbow</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
537 <option value="gist_heat">gist_heat</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
538 <option value="gnuplot">gnuplot</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
539 <option value="gnuplot2">gnuplot2</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
540 <option value="CMRmap">CMRmap</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
541 <option value="bwr">bwr</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
542 <option value="hsv">hsv</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
543 <option value="brg">brg</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
544 <option value="jet">jet</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
545 <option value="afmhot">afmhot</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
546 <option value="Accent_r">Accent reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
547 <option value="Spectral_r">Spectral reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
548 <option value="Set1_r">Set1 reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
549 <option value="Set2_r">Set2 reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
550 <option value="Set3_r">Set3 reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
551 <option value="Dark2_r">Dark2 reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
552 <option value="Reds_r">Reds reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
553 <option value="Oranges_r">Oranges reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
554 <option value="Greens_r">Greens reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
555 <option value="Blues_r">Blues reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
556 <option value="Greys_r">Greys reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
557 <option value="Purples_r">Purples reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
558 <option value="Paired_r">Paired reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
559 <option value="Pastel1_r">Pastel1 reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
560 <option value="Pastel2_r">Pastel2 reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
561 <option value="spring_r">spring reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
562 <option value="summer_r">summer reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
563 <option value="autumn_r">autumn reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
564 <option value="winter_r">winter reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
565 <option value="hot_r">hot reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
566 <option value="coolwarm_r">coolwarm reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
567 <option value="cool_r">cool reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
568 <option value="seismic_r">seismic reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
569 <option value="terrain_r">terrain reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
570 <option value="ocean_r">ocean reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
571 <option value="rainbow_r">rainbow reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
572 <option value="bone_r">bone reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
573 <option value="flag_r">flag reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
574 <option value="prism_r">prism reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
575 <option value="cubehelix_r">cubehelix reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
576 <option value="binary_r">binary reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
577 <option value="pink_r">pink reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
578 <option value="gray_r">gray reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
579 <option value="copper_r">copper reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
580 <option value="BrBG_r">BrBG reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
581 <option value="BuGn_r">BuGn reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
582 <option value="BuPu_r">BuPu reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
583 <option value="GnBu_r">GnBu reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
584 <option value="OrRd_r">OrRd reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
585 <option value="PiYG_r">PiYG reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
586 <option value="PRGn_r">PRGn reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
587 <option value="PuOr_r">PuOr reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
588 <option value="PuRd_r">PuRd reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
589 <option value="PuBu_r">PuBu reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
590 <option value="RdBu_r">RdBu reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
591 <option value="RdGy_r">RdGy reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
592 <option value="RdPu_r">RdPu reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
593 <option value="YlGn_r">YlGn reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
594 <option value="PuBuGn_r">PuBuGn reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
595 <option value="RdYlBu_r" selected="True">RdYlBu reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
596 <option value="RdYlGn_r">RdYlGn reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
597 <option value="YlGnBu_r">YlGnBu reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
598 <option value="YlOrBr_r">YlOrBr reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
599 <option value="YlOrRd_r">YlOrRd reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
600 <option value="gist_gray_r">gist_gray reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
601 <option value="gist_stern_r">gist_stern reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
602 <option value="gist_earth_r">gist_earth reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
603 <option value="gist_yarg_r">gist_yarg reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
604 <option value="gist_ncar_r">gist_ncar reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
605 <option value="gist_rainbow_r">gist_rainbow reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
606 <option value="gist_heat_r">gist_heat reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
607 <option value="gnuplot_r">gnuplot reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
608 <option value="gnuplot2_r">gnuplot2 reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
609 <option value="CMRmap_r">CMRmap reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
610 <option value="bwr_r">bwr reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
611 <option value="hsv_r">hsv reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
612 <option value="brg_r">brg reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
613 <option value="jet_r">jet reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
614 <option value="afmhot_r">afmhot reversed</option>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
615 </param>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
616 </when>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
617 </conditional>
eca03db4f612 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 9471ad965cd7c88c96a03c97fc1cdfe17f379c95"
iuc
parents: 4
diff changeset
618 </xml>
0
2074627b0f83 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit a68062b7e444233416bd30404be9bf92b6f1a363
iuc
parents:
diff changeset
619 </macros>