view test-data/test11.ini @ 15:36b848d5f3ec draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 7df009cda0bc57c6891fc5273b2440db6fcf5719

[x-axis]
where = top
[hic_section_1_0]
file = test-data/Li_et_al_2015.h5
file_type = hic_matrix
title = Kc DpnII (Li et al. 2015)
depth = 100000
colormap = RdYlBu_r
transform = log1p
show_masked_bins = true
scale_factor = 2.0
rasterize = true
[spacer]
height = 0.05
[bedgraph_matrix_3]
file = test-data/tad_score.gz
title = TAD separation score (Ramirez et al.) as block with horizontal lines and data range
height = 10.0
type = lines
file_type = bedgraph_matrix
show_data_range = true
plot_horizontal_lines = true
pos_score_in_bin = block
individual_color = grey
summary_color = #1f77b4
[bedgraph_matrix_4]
file = test-data/tad_score.gz
title = TAD separation score (Ramirez et al.) as center without horizontal lines, summary in red and individual in blue
height = 10.0
type = lines
file_type = bedgraph_matrix
show_data_range = false
plot_horizontal_lines = false
pos_score_in_bin = center
individual_color = blue
summary_color = red