Mercurial > repos > iuc > pysradb_search
diff test-data/test_04.tabular @ 0:1005ffbccd86 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
| author | iuc |
|---|---|
| date | Fri, 11 Nov 2022 07:35:39 +0000 |
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| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test_04.tabular Fri Nov 11 07:35:39 2022 +0000 @@ -0,0 +1,17 @@ +study_accession experiment_accession experiment_title sample_taxon_id sample_scientific_name experiment_library_strategy experiment_library_source experiment_library_selection sample_accession sample_alias experiment_instrument_model pool_member_spots run_1_size run_1_accession run_1_total_spots run_1_total_bases +ERP124756 ERX4648078 Illumina HiSeq 4000 paired end sequencing 749906 gut metagenome AMPLICON METAGENOMIC PCR ERS5259723 SAMEA7503087 Illumina HiSeq 4000 173663 56058305 ERR4778259 173663 99683370 +ERP124756 ERX4648028 Illumina HiSeq 4000 paired end sequencing 749906 gut metagenome AMPLICON METAGENOMIC PCR ERS5259673 SAMEA7503037 Illumina HiSeq 4000 173099 53076773 ERR4778209 173099 99532489 +ERP124756 ERX4648027 Illumina HiSeq 4000 paired end sequencing 749906 gut metagenome AMPLICON METAGENOMIC PCR ERS5259672 SAMEA7503036 Illumina HiSeq 4000 173338 52865525 ERR4778208 173338 99669968 +SRP341852 SRX12665402 16S sequencing of interdigital skin swab from sheep 1338477 skin metagenome AMPLICON METAGENOMIC PCR SRS10618044 Sheep skin microbiome Illumina MiSeq 166958 64367895 SRR16387857 166958 100324236 +SRP117119 SRX11222252 16s sequencing of stool 408170 human gut metagenome AMPLICON METAGENOMIC PCR SRS9254173 UMB23_10.1 HiSeq X Ten 286384 65801055 SRR14907840 286384 100234400 +DRP007056 DRX162766 Illumina MiSeq sequencing of SAMD00164285 527639 wastewater metagenome AMPLICON METAGENOMIC PCR DRS174917 SAMD00164285 Illumina MiSeq 336318 46757340 DRR172154 336318 100373320 +SRP276298 SRX8896576 16S_rRNA_metagenome_blood_chickens 256318 metagenome AMPLICON METAGENOMIC PCR SRS7155476 81_buffy coat_14dpi Illumina MiSeq 166389 55327914 SRR12398266 166389 99833400 +SRP276298 SRX8896560 16S_rRNA_metagenome_blood_chickens 256318 metagenome AMPLICON METAGENOMIC PCR SRS7155460 45_buffy coat_7dpi Illumina MiSeq 165929 57268691 SRR12398282 165929 99557400 +ERP112563 ERX2987278 Illumina MiSeq sequencing; qiita_ptid_5663:12056.4499LW0042 870726 food metagenome OTHER METAGENOMIC PCR ERS2958743 SAMEA5151002 Illumina MiSeq 339262 53039991 ERR2984706 339262 100082290 +ERP114115 ERX3224980 Illumina MiSeq paired end sequencing 1510822 pig gut metagenome AMPLICON METAGENOMIC PCR ERS3201120 SAMEA5394763 Illumina MiSeq 165654 68047601 ERR3197204 165654 99532834 +SRP192618 SRX5687626 Whole Population Sequencing of Escherchia Coli Cultures Evolved to Withstand Starvation 562 Escherichia coli WGA METAGENOMIC RANDOM SRS4627531 SampleM2_T700_P116 NextSeq 500 330161 41707500 SRR8901618 330161 99708622 +SRP184350 SRX5345728 16SrRNS gene amplicon by Illumina miseq: Humpback whale blow 1850221 respiratory tract metagenome AMPLICON METAGENOMIC PCR SRS4337512 37_S47_L001 Illumina MiSeq 182446 52474806 SRR8543521 182446 99871728 +SRP184350 SRX5345692 16SrRNS gene amplicon by Illumina miseq: Humpback whale blow 1850221 respiratory tract metagenome AMPLICON METAGENOMIC PCR SRS4337478 45_S31_L001 Illumina MiSeq 188922 51993718 SRR8543557 188922 100140147 +SRP184350 SRX5345678 16SrRNS gene amplicon by Illumina miseq: Humpback whale blow 1850221 respiratory tract metagenome AMPLICON METAGENOMIC PCR SRS4337464 23_S30_L001 Illumina MiSeq 185157 52670220 SRR8543571 185157 100079103 +SRP168493 SRX5027285 DNA-Seq of diel tents 561 Escherichia WGS METAGENOMIC unspecified SRS4058709 VostokTent3Time12S67 Illumina MiSeq 545114 69214545 SRR8208050 545114 99804019 +SRP117119 SRX3169990 408170 human gut metagenome AMPLICON METAGENOMIC PCR SRS2500000 UMB07_09 Illumina MiSeq 284791 64753277 SRR6018546 284791 99676850