Mercurial > repos > iuc > qiime_align_seqs

view test-data/summarize_taxa/1_L5.txt @ 7:e8bb88f051ec draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c845cb240f57663cf1e2240c5c506ea0b294872c"
author iuc
date Thu, 05 Dec 2019 07:44:03 -0500
parents 56adf8db7ce7
children
line wrap: on
line source

#SampleID	BarcodeSequence	LinkerPrimerSequence	SampleType	year	month	day	subject	days_since_epoch	Description	Unclassified;Other	k__Bacteria;Other	k__Bacteria;p__Proteobacteria	Unclassified;Other;Other	k__Bacteria;Other;Other	k__Bacteria;p__Proteobacteria;Other	Unclassified;Other;Other;Other	k__Bacteria;Other;Other;Other	k__Bacteria;p__Proteobacteria;Other;Other	Unclassified;Other;Other;Other;Other	k__Bacteria;Other;Other;Other;Other	k__Bacteria;p__Proteobacteria;Other;Other;Other
f1	ACACTGTTCATG	GTGCCAGCMGCCGCGGTAA	feces	2008	10	22	1	14174	fecal1	0.0	1.0	0.0	0.0	1.0	0.0	0.0	1.0	0.0	0.0	1.0	0.0
f2	ACCAGACGATGC	GTGCCAGCMGCCGCGGTAA	feces	2008	10	23	1	14175	fecal2	0.0454545454545	0.954545454545	0.0	0.0454545454545	0.954545454545	0.0	0.0454545454545	0.954545454545	0.0	0.0454545454545	0.954545454545	0.0
f3	ACCAGACGATGC	GTGCCAGCMGCCGCGGTAA	feces	2008	10	23	1	14175	identical sequences to fecal2	0.0	1.0	0.0	0.0	1.0	0.0	0.0	1.0	0.0	0.0	1.0	0.0
f4	ACCAGACGATGC	GTGCCAGCMGCCGCGGTAA	feces	2008	10	23	1	14175	all sequences identical, map to GG 295053 at 97 percent id	0.0	1.0	0.0	0.0	1.0	0.0	0.0	1.0	0.0	0.0	1.0	0.0
p1	AACGCACGCTAG	GTGCCAGCMGCCGCGGTAA	L_palm	2008	10	21	1	14173	palm1, contains one randomly generated sequence	0.130434782609	0.869565217391	0.0	0.130434782609	0.869565217391	0.0	0.130434782609	0.869565217391	0.0	0.130434782609	0.869565217391	0.0
p2	ACACTGTTCATG	GTGCCAGCMGCCGCGGTAA	L_palm	2008	10	22	1	14174	palm2	0.272727272727	0.681818181818	0.0454545454545	0.272727272727	0.681818181818	0.0454545454545	0.272727272727	0.681818181818	0.0454545454545	0.272727272727	0.681818181818	0.0454545454545
t1	AGTGAGAGAAGC	GTGCCAGCMGCCGCGGTAA	Tongue	2008	10	21	1	14173	tongue1, contains one randomly generated sequence	0.869565217391	0.130434782609	0.0	0.869565217391	0.130434782609	0.0	0.869565217391	0.130434782609	0.0	0.869565217391	0.130434782609	0.0
t2	ATACTATTGCGC	GTGCCAGCMGCCGCGGTAA	Tongue	2008	10	22	1	14174	tongue2	0.681818181818	0.318181818182	0.0	0.681818181818	0.318181818182	0.0	0.681818181818	0.318181818182	0.0	0.681818181818	0.318181818182	0.0
not16S.1	ATACTATTGCGC	GTGCCAGCMGCCGCGGTAA	Other	2008	10	22	1	14174	randomly generated sequence plus some variants, these should not map to 16S	0.909090909091	0.0909090909091	0.0	0.909090909091	0.0909090909091	0.0	0.909090909091	0.0909090909091	0.0	0.909090909091	0.0909090909091	0.0