# HG changeset patch # User iuc # Date 1575549963 18000 # Node ID 9023dcdccf72cbff5ab1abd17b972e87971748d0 # Parent 682c9e35ff19d90869f340955ef56f9a4bc84738 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c845cb240f57663cf1e2240c5c506ea0b294872c" diff -r 682c9e35ff19 -r 9023dcdccf72 alpha_rarefaction.xml --- a/alpha_rarefaction.xml Tue Oct 30 19:24:42 2018 -0400 +++ b/alpha_rarefaction.xml Thu Dec 05 07:46:03 2019 -0500 @@ -1,4 +1,4 @@ -<tool id="qiime_alpha_rarefaction" name="Perform alpha rarefaction" version="@WRAPPER_VERSION@.0"> +<tool id="qiime_alpha_rarefaction" name="Perform alpha rarefaction" version="@WRAPPER_VERSION@.0" profile="@PROFILE@"> <description>(alpha_rarefaction)</description> <macros> <import>macros.xml</import> @@ -6,9 +6,7 @@ <expand macro="requirements"/> <version_command>alpha_rarefaction.py --version</version_command> <command detect_errors="aggressive"><![CDATA[ -## set matplotlib backend -echo "backend:agg" > matplotlibrc && - +@MPLBACKEND@ alpha_rarefaction.py --otu_table_fp '$otu_table_fp' --mapping_fp '$mapping_fp' diff -r 682c9e35ff19 -r 9023dcdccf72 macros.xml --- a/macros.xml Tue Oct 30 19:24:42 2018 -0400 +++ b/macros.xml Thu Dec 05 07:46:03 2019 -0500 @@ -1,6 +1,8 @@ <?xml version="1.0" ?> <macros> + <token name="@PROFILE@">18.01</token> <token name="@WRAPPER_VERSION@">1.9.1</token> + <token name="@MPLBACKEND@"><![CDATA[export MPLBACKEND=Agg && echo "backend:agg" > matplotlibrc &&]]></token> <xml name="requirements"> <requirements> <requirement type="package" version="@WRAPPER_VERSION@">qiime</requirement>