Mercurial > repos > iuc > qiime_assign_taxonomy
annotate test-data/summarize_taxa_through_plots/mapping_sort/otu_table_sorted_L5_json.biom @ 7:7cebb6ea8c23 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c845cb240f57663cf1e2240c5c506ea0b294872c"
author | iuc |
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date | Thu, 05 Dec 2019 07:44:57 -0500 |
parents | fa330c61c0a5 |
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rev | line source |
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fa330c61c0a5
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
iuc
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1 {"id": "No Table ID","format": "Biological Observation Matrix 1.0.0","format_url": "http://biom-format.org","matrix_type": "sparse","generated_by": "BIOM-Format 2.1.5","date": "2017-05-01T13:44:25.645338","type": "OTU table","matrix_element_type": "float","shape": [14, 9],"data": [[0,0,0.013422818791946308],[0,1,0.013605442176870748],[0,2,0.026666666666666668],[0,3,0.027397260273972601],[0,4,0.013422818791946308],[0,5,0.046979865771812075],[0,6,0.02],[0,7,0.046979865771812075],[0,8,0.020270270270270271],[1,3,0.0068493150684931503],[1,5,0.020134228187919462],[1,6,0.02],[1,7,0.0067114093959731542],[1,8,0.0067567567567567571],[2,0,0.073825503355704689],[2,1,0.28571428571428575],[2,2,0.1933333333333333],[2,3,0.14383561643835616],[2,4,0.389261744966443],[2,5,0.27516778523489926],[2,6,0.65333333333333321],[2,7,0.52348993288590584],[2,8,0.69594594594594639],[3,5,0.020134228187919462],[3,6,0.033333333333333333],[3,7,0.013422818791946308],[3,8,0.0472972972972973],[4,0,0.0067114093959731542],[4,5,0.026845637583892617],[5,8,0.020270270270270271],[6,0,0.10738255033557048],[6,1,0.013605442176870748],[6,2,0.093333333333333338],[6,3,0.027397260273972601],[6,4,0.033557046979865772],[6,5,0.0067114093959731542],[7,3,0.061643835616438353],[7,6,0.02],[8,0,0.7852348993288587],[8,1,0.68707482993197289],[8,2,0.68000000000000027],[8,3,0.69863013698630183],[8,4,0.38255033557046958],[8,5,0.42281879194630856],[8,6,0.1999999999999999],[8,7,0.39597315436241587],[8,8,0.18918918918918914],[9,5,0.0067114093959731542],[9,6,0.013333333333333334],[9,7,0.0067114093959731542],[9,8,0.0067567567567567571],[10,4,0.033557046979865772],[10,5,0.013422818791946308],[11,6,0.013333333333333334],[12,0,0.013422818791946308],[12,3,0.034246575342465752],[12,4,0.1476510067114094],[12,5,0.15436241610738255],[12,6,0.026666666666666668],[12,7,0.0067114093959731542],[12,8,0.013513513513513514],[13,2,0.0066666666666666671],[13,5,0.0067114093959731542]],"rows": [{"id": "Root;k__Bacteria;Other;Other;Other", "metadata": null},{"id": "Root;k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Coriobacteriales", "metadata": null},{"id": "Root;k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales", "metadata": null},{"id": "Root;k__Bacteria;p__Deferribacteres;c__Deferribacteres;o__Deferribacterales", "metadata": null},{"id": "Root;k__Bacteria;p__Firmicutes;Other;Other", "metadata": null},{"id": "Root;k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales", "metadata": null},{"id": "Root;k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales", "metadata": null},{"id": "Root;k__Bacteria;p__Firmicutes;c__Bacilli;o__Turicibacterales", "metadata": null},{"id": "Root;k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales", "metadata": null},{"id": "Root;k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales", "metadata": null},{"id": "Root;k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales", "metadata": null},{"id": "Root;k__Bacteria;p__TM7;c__TM7-3;o__CW040", "metadata": null},{"id": "Root;k__Bacteria;p__Tenericutes;c__Erysipelotrichi;o__Erysipelotrichales", "metadata": null},{"id": "Root;k__Bacteria;p__Tenericutes;c__Mollicutes;o__RF39", "metadata": null}],"columns": [{"id": "PC.354", "metadata": null},{"id": "PC.355", "metadata": null},{"id": "PC.356", "metadata": null},{"id": "PC.481", "metadata": null},{"id": "PC.593", "metadata": null},{"id": "PC.607", "metadata": null},{"id": "PC.634", "metadata": null},{"id": "PC.635", "metadata": null},{"id": "PC.636", "metadata": null}]} |