# HG changeset patch # User iuc # Date 1540942231 14400 # Node ID 5fc2acd6de43cdceb95d8aba06c7ad7044f089b4 # Parent 486570c88d1b55f007f6c158fae88d8b60c3325d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit a4b0969b33a68a0ea9ba12291f6694aec24f13ed diff -r 486570c88d1b -r 5fc2acd6de43 beta_diversity_through_plots_html_generation.py --- a/beta_diversity_through_plots_html_generation.py Sat Aug 05 07:14:36 2017 -0400 +++ b/beta_diversity_through_plots_html_generation.py Tue Oct 30 19:30:31 2018 -0400 @@ -21,7 +21,7 @@ for directory in dir_list: regexp_result = re.search( - '([a-zA-Z\_]*)_emperor_pcoa_plot', + r'([a-zA-Z\_]*)_emperor_pcoa_plot', directory) metric = regexp_result.group(1) s += '\t\t\t\t

' + metric + ': ' diff -r 486570c88d1b -r 5fc2acd6de43 test-data/make_otu_heatmap/basic_heatmap.svg --- a/test-data/make_otu_heatmap/basic_heatmap.svg Sat Aug 05 07:14:36 2017 -0400 +++ b/test-data/make_otu_heatmap/basic_heatmap.svg Tue Oct 30 19:30:31 2018 -0400 @@ -5,183 +5,175 @@ diff -r 486570c88d1b -r 5fc2acd6de43 test-data/multiple_join_paired_ends/output_with_barcode/forward_1/fastqjoin.un1.fastq --- a/test-data/multiple_join_paired_ends/output_with_barcode/forward_1/fastqjoin.un1.fastq Sat Aug 05 07:14:36 2017 -0400 +++ b/test-data/multiple_join_paired_ends/output_with_barcode/forward_1/fastqjoin.un1.fastq Tue Oct 30 19:30:31 2018 -0400 @@ -5,4 +5,4 @@ @HWI-ST753:99:C038WACXX:4:1101:1357:1989 1:N:0: NACGGGGGGGGCAAGCGTTGTTCGGAATTACTGGGCGTAAAGGGTTCGTAGGTGGCCTACTAAGTCAGACGAGAGCTCACTCAGCATATCTGGCGCACTG + -#1=DDFFFDDD@6@BBB8?B?BCBDBBDDCDCDD?BB79?ACC?+8?:8??B@@B############################################# \ No newline at end of file +#1=DDFFFDDD@6@BBB8?B?BCBDBBDDCDCDD?BB79?ACC?+8?:8??B@@B############################################# diff -r 486570c88d1b -r 5fc2acd6de43 test-data/multiple_join_paired_ends/output_with_barcode/forward_1/fastqjoin.un2.fastq --- a/test-data/multiple_join_paired_ends/output_with_barcode/forward_1/fastqjoin.un2.fastq Sat Aug 05 07:14:36 2017 -0400 +++ b/test-data/multiple_join_paired_ends/output_with_barcode/forward_1/fastqjoin.un2.fastq Tue Oct 30 19:30:31 2018 -0400 @@ -5,4 +5,4 @@ @HWI-ST753:99:C038WACXX:4:1101:1357:1989 2:N:0: ACGTGTACCCAAA + -@CCFFFDEHHHGF \ No newline at end of file +@CCFFFDEHHHGF diff -r 486570c88d1b -r 5fc2acd6de43 test-data/multiple_join_paired_ends/output_with_barcode/forward_2/fastqjoin.un1.fastq --- a/test-data/multiple_join_paired_ends/output_with_barcode/forward_2/fastqjoin.un1.fastq Sat Aug 05 07:14:36 2017 -0400 +++ b/test-data/multiple_join_paired_ends/output_with_barcode/forward_2/fastqjoin.un1.fastq Tue Oct 30 19:30:31 2018 -0400 @@ -1,4 +1,4 @@ @HWI-ST753:99:C038WACXX:4:1101:1357:1989 1:N:0: NACGGGGGGGGCAAGCGTTGTTCGGAATTACTGGGCGTAAAGGGTTCGTAGGTGGCCTACTAAGTCAGACGAGAGCTCACTCAGCATATCTGGCGCACTG + -#1=DDFFFDDD@6@BBB8?B?BCBDBBDDCDCDD?BB79?ACC?+8?:8??B@@B############################################# \ No newline at end of file +#1=DDFFFDDD@6@BBB8?B?BCBDBBDDCDCDD?BB79?ACC?+8?:8??B@@B############################################# diff -r 486570c88d1b -r 5fc2acd6de43 test-data/multiple_join_paired_ends/output_with_barcode/forward_2/fastqjoin.un2.fastq --- a/test-data/multiple_join_paired_ends/output_with_barcode/forward_2/fastqjoin.un2.fastq Sat Aug 05 07:14:36 2017 -0400 +++ b/test-data/multiple_join_paired_ends/output_with_barcode/forward_2/fastqjoin.un2.fastq Tue Oct 30 19:30:31 2018 -0400 @@ -1,4 +1,4 @@ @HWI-ST753:99:C038WACXX:4:1101:1357:1989 2:N:0: NACGGGGGGGGCAAGCGTTGTTCGGAATTACTGGGCGTAAAGGGTTCGTAGGTGGCCTACTAAGTCAGACGAGAGCTCACTCAGCATATCTGGCGCACTG + -#1=DDFFFDDD@6@BBB8?B?BCBDBBDDCDCDD?BB79?ACC?+8?:8??B@@B############################################# \ No newline at end of file +#1=DDFFFDDD@6@BBB8?B?BCBDBBDDCDCDD?BB79?ACC?+8?:8??B@@B############################################# diff -r 486570c88d1b -r 5fc2acd6de43 test-data/multiple_join_paired_ends/output_without_barcode/forward_1/fastqjoin.un1.fastq --- a/test-data/multiple_join_paired_ends/output_without_barcode/forward_1/fastqjoin.un1.fastq Sat Aug 05 07:14:36 2017 -0400 +++ b/test-data/multiple_join_paired_ends/output_without_barcode/forward_1/fastqjoin.un1.fastq Tue Oct 30 19:30:31 2018 -0400 @@ -5,4 +5,4 @@ @HWI-ST753:99:C038WACXX:4:1101:1357:1989 1:N:0: NACGGGGGGGGCAAGCGTTGTTCGGAATTACTGGGCGTAAAGGGTTCGTAGGTGGCCTACTAAGTCAGACGAGAGCTCACTCAGCATATCTGGCGCACTG + -#1=DDFFFDDD@6@BBB8?B?BCBDBBDDCDCDD?BB79?ACC?+8?:8??B@@B############################################# \ No newline at end of file +#1=DDFFFDDD@6@BBB8?B?BCBDBBDDCDCDD?BB79?ACC?+8?:8??B@@B############################################# diff -r 486570c88d1b -r 5fc2acd6de43 test-data/multiple_join_paired_ends/output_without_barcode/forward_1/fastqjoin.un2.fastq --- a/test-data/multiple_join_paired_ends/output_without_barcode/forward_1/fastqjoin.un2.fastq Sat Aug 05 07:14:36 2017 -0400 +++ b/test-data/multiple_join_paired_ends/output_without_barcode/forward_1/fastqjoin.un2.fastq Tue Oct 30 19:30:31 2018 -0400 @@ -5,4 +5,4 @@ @HWI-ST753:99:C038WACXX:4:1101:1357:1989 2:N:0: ACGTGTACCCAAA + -@CCFFFDEHHHGF \ No newline at end of file +@CCFFFDEHHHGF diff -r 486570c88d1b -r 5fc2acd6de43 test-data/multiple_join_paired_ends/output_without_barcode/forward_2/fastqjoin.un1.fastq --- a/test-data/multiple_join_paired_ends/output_without_barcode/forward_2/fastqjoin.un1.fastq Sat Aug 05 07:14:36 2017 -0400 +++ b/test-data/multiple_join_paired_ends/output_without_barcode/forward_2/fastqjoin.un1.fastq Tue Oct 30 19:30:31 2018 -0400 @@ -5,4 +5,4 @@ @HWI-ST753:99:C038WACXX:4:1101:1357:1989 1:N:0: NACGGGGGGGGCAAGCGTTGTTCGGAATTACTGGGCGTAAAGGGTTCGTAGGTGGCCTACTAAGTCAGACGAGAGCTCACTCAGCATATCTGGCGCACTG + -#1=DDFFFDDD@6@BBB8?B?BCBDBBDDCDCDD?BB79?ACC?+8?:8??B@@B############################################# \ No newline at end of file +#1=DDFFFDDD@6@BBB8?B?BCBDBBDDCDCDD?BB79?ACC?+8?:8??B@@B############################################# diff -r 486570c88d1b -r 5fc2acd6de43 test-data/multiple_join_paired_ends/output_without_barcode/forward_2/fastqjoin.un2.fastq --- a/test-data/multiple_join_paired_ends/output_without_barcode/forward_2/fastqjoin.un2.fastq Sat Aug 05 07:14:36 2017 -0400 +++ b/test-data/multiple_join_paired_ends/output_without_barcode/forward_2/fastqjoin.un2.fastq Tue Oct 30 19:30:31 2018 -0400 @@ -5,4 +5,4 @@ @HWI-ST753:99:C038WACXX:4:1101:1357:1989 2:N:0: ACGTGTACCCAAA + -@CCFFFDEHHHGF \ No newline at end of file +@CCFFFDEHHHGF