Mercurial > repos > iuc > qiime_filter_otus_from_otu_table
view test-data/split_libraries/split_library_log @ 6:8b42de6ad28a draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit a4b0969b33a68a0ea9ba12291f6694aec24f13ed
author | iuc |
---|---|
date | Tue, 30 Oct 2018 19:57:18 -0400 |
parents | 8824c27efae2 |
children |
line wrap: on
line source
Number raw input seqs 8 Length outside bounds of 200 and 1000 0 Num ambiguous bases exceeds limit of 6 0 Missing Qual Score 0 Mean qual score below minimum of 25 0 Max homopolymer run exceeds limit of 6 0 Num mismatches in primer exceeds limit of 0: 0 Sequence length details for all sequences passing quality filters: Raw len min/max/avg 244.0/276.0/255.5 Wrote len min/max/avg 211.0/243.0/222.5 Barcodes corrected/not 0/0 Uncorrected barcodes will not be written to the output fasta file. Corrected barcodes will be written with the appropriate barcode category. Corrected but unassigned sequences will not be written unless --retain_unassigned_reads is enabled. Total valid barcodes that are not in mapping file 0 Sequences associated with valid barcodes that are not in the mapping file will not be written. Barcodes in mapping file Num Samples 3 Sample ct min/max/mean: 2 / 4 / 2.67 Sample Sequence Count Barcode PC.634 4 ACAGAGTCGGCT PC.354 2 AGCACGAGCCTA PC.481 2 ACCAGCGACTAG PC.593 0 AGCAGCACTTGT PC.636 0 ACGGTGAGTGTC PC.635 0 ACCGCAGAGTCA PC.356 0 ACAGACCACTCA PC.607 0 AACTGTGCGTAC PC.355 0 AACTCGTCGATG Total number seqs written 8