Some general rules about formatting mapping files (see here for additional details):
SampleID | BarcodeSequence | LinkerPrimerSequence | SampleType | Year | Month | Day | Subject | ReportedAntibioticUsage | DaysSinceExperimentStart | Description |
---|---|---|---|---|---|---|---|---|---|---|
L1S8 | AGCTGACTAGTC | GTGCCAGCMGCCGCGGTAA | gut | 2008 | 10 | 28 | 1 | Yes | 0 | 1_Fece_10_28_2008 |
L1S140 | ATGGCAGCTCTA | GTGCCAGCMGCCGCGGTAA | gut | 2008 | 10 | 28 | 2 | Yes | 0 | 2_Fece_10_28_2008 |
L1S57 | ACACACTATGGC | GTGCCAGCMGCCGCGGTAA | gut | 2009 | 1 | 20 | 1 | No | 84 | 1_Fece_1_20_2009 |
L1S208 | CTGAGATACGCG | GTGCCAGCMGCCGCGGTAA | gut | 2009 | 1 | 20 | 2 | No | 84 | 2_Fece_1_20_2009 |
L1S76 | ACTACGTGTGGT | GTGCCAGCMGCCGCGGTAA | gut | 2009 | 2 | 17 | 1 | No | 112 | 1_Fece_2_17_2009 |
L1S105 | AGTGCGATGCGT | GTGCCAGCMGCCGCGGTAA | gut | 2009 | 3 | 17 | 1 | No | 140 | 1_Fece_3_17_2009 |
L1S257 | CCGACTGAGATG | GTGCCAGCMGCCGCGGTAA | gut | 2009 | 3 | 17 | 2 | No | 140 | 2_Fece_3_17_2009 |
L1S281 | CCTCTCGTGATC | GTGCCAGCMGCCGCGGTAA | gut | 2009 | 4 | 14 | 2 | No | 168 | 2_Fece_4_14_2009 |
L2S240 | CATATCGCAGTT | GTGCCAGCMGCCGCGGTAA | left palm | 2008 | 10 | 28 | 2 | Yes | 0 | 2_L_Palm_10_28_2008 |
L2S155 | ACGATGCGACCA | GTGCCAGCMGCCGCGGTAA | left palm | 2009 | 1 | 20 | 1 | No | 84 | 1_L_Palm_1_20_2009 |
L2S309 | CGTGCATTATCA | GTGCCAGCMGCCGCGGTAA | left palm | 2009 | 1 | 20 | 2 | No | 84 | 2_L_Palm_1_20_2009 |
L2S175 | AGCTATCCACGA | GTGCCAGCMGCCGCGGTAA | left palm | 2009 | 2 | 17 | 1 | No | 112 | 1_L_Palm_2_17_2009 |
L2S204 | ATGCAGCTCAGT | GTGCCAGCMGCCGCGGTAA | left palm | 2009 | 3 | 17 | 1 | No | 140 | 1_L_Palm_3_17_2009 |
L2S357 | CTAACGCAGTCA | GTGCCAGCMGCCGCGGTAA | left palm | 2009 | 3 | 17 | 2 | No | 140 | 2_L_Palm_3_17_2009 |
L2S222 | CACGTGACATGT | GTGCCAGCMGCCGCGGTAA | left palm | 2009 | 4 | 14 | 1 | No | 168 | 1_L_Palm_4_14_2009 |
L2S382 | CTCAATGACTCA | GTGCCAGCMGCCGCGGTAA | left palm | 2009 | 4 | 14 | 2 | No | 168 | 2_L_Palm_4_14_2009 |
L3S242 | ACAGTTGCGCGA | GTGCCAGCMGCCGCGGTAA | right palm | 2008 | 10 | 28 | 1 | Yes | 0 | 1_R_Palm_10_28_2008 |
L3S378 | ATCGATCTGTGG | GTGCCAGCMGCCGCGGTAA | right palm | 2008 | 10 | 28 | 2 | Yes | 0 | 2_R_Palm_10_28_2008 |
L3S294 | CACGACAGGCTA | GTGCCAGCMGCCGCGGTAA | right palm | 2009 | 1 | 20 | 1 | No | 84 | 1_R_Palm_1_20_2009 |
L4S63 | CTCGTGGAGTAG | GTGCCAGCMGCCGCGGTAA | right palm | 2009 | 1 | 20 | 2 | No | 84 | 2_R_Palm_1_20_2009 |
L3S313 | AGTGTCACGGTG | GTGCCAGCMGCCGCGGTAA | right palm | 2009 | 2 | 17 | 1 | No | 112 | 1_R_Palm_2_17_2009 |
L3S341 | CAAGTGAGAGAG | GTGCCAGCMGCCGCGGTAA | right palm | 2009 | 3 | 17 | 1 | No | 140 | 1_R_Palm_3_17_2009 |
L4S112 | GCGTTACACACA | GTGCCAGCMGCCGCGGTAA | right palm | 2009 | 3 | 17 | 2 | No | 140 | 2_R_Palm_3_17_2009 |
L3S360 | CATCGTATCAAC | GTGCCAGCMGCCGCGGTAA | right palm | 2009 | 4 | 14 | 1 | No | 168 | 1_R_Palm_4_14_2009 |
L4S137 | GAACTGTATCTC | GTGCCAGCMGCCGCGGTAA | right palm | 2009 | 4 | 14 | 2 | No | 168 | 2_R_Palm_4_14_2009 |
L5S104 | CAGTGTCAGGAC | GTGCCAGCMGCCGCGGTAA | tongue | 2008 | 10 | 28 | 1 | Yes | 0 | 1_Tong_10_28_2008 |
L5S240 | CTGGACTCATAG | GTGCCAGCMGCCGCGGTAA | tongue | 2008 | 10 | 28 | 2 | Yes | 0 | 2_Tong_10_28_2008 |
L5S155 | ATCTTAGACTGC | GTGCCAGCMGCCGCGGTAA | tongue | 2009 | 1 | 20 | 1 | No | 84 | 1_Tong_1_20_2009 |
L6S20 | GAGGCTCATCAT | GTGCCAGCMGCCGCGGTAA | tongue | 2009 | 1 | 20 | 2 | No | 84 | 2_Tong_1_20_2009 |
L5S174 | CAGACATTGCGT | GTGCCAGCMGCCGCGGTAA | tongue | 2009 | 2 | 17 | 1 | No | 112 | 1_Tong_2_17_2009 |
L5S203 | CGATGCACCAGA | GTGCCAGCMGCCGCGGTAA | tongue | 2009 | 3 | 17 | 1 | No | 140 | 1_Tong_3_17_2009 |
L6S68 | GATACGTCCTGA | GTGCCAGCMGCCGCGGTAA | tongue | 2009 | 3 | 17 | 2 | No | 140 | 2_Tong_3_17_2009 |
L5S222 | CTAGAGACTCTT | GTGCCAGCMGCCGCGGTAA | tongue | 2009 | 4 | 14 | 1 | No | 168 | 1_Tong_4_14_2009 |
L6S93 | GATTAGCACTCT | GTGCCAGCMGCCGCGGTAA | tongue | 2009 | 4 | 14 | 2 | No | 168 | 2_Tong_4_14_2009 |