Mercurial > repos > iuc > qiime_filter_taxa_from_otu_table
diff filter_taxa_from_otu_table.xml @ 5:95a39cd8a53a draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit 3b54163c4f7daff76fcc589c4a9057bb03904380
author | iuc |
---|---|
date | Sat, 05 Aug 2017 07:32:36 -0400 |
parents | 9209e7b16b05 |
children | 13ad599d3fe3 |
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--- a/filter_taxa_from_otu_table.xml Mon Jul 10 16:45:08 2017 -0400 +++ b/filter_taxa_from_otu_table.xml Sat Aug 05 07:32:36 2017 -0400 @@ -1,21 +1,21 @@ -<tool id="qiime_filter_taxa_from_otu_table" name="Filter taxa from otu table" version="@WRAPPER_VERSION@.0"> - <description>Filter taxa from an OTU table</description> +<tool id="qiime_filter_taxa_from_otu_table" name="Filter taxa from an OTU table" version="@WRAPPER_VERSION@.0"> + <description>(filter_taxa_from_otu_table)</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements"/> <version_command>filter_taxa_from_otu_table.py --version</version_command> <command detect_errors="aggressive"><![CDATA[ - filter_taxa_from_otu_table.py - --input_otu_table_fp '$input_otu_table_fp' - --output_otu_table_fp '$output_otu_table_fp' - #if str($positive_taxa) != '' - --positive_taxa '$positive_taxa' - #end if - #if str($negative_taxa) != '' - --negative_taxa '$negative_taxa' - #end if - --metadata_field '$metadata_field' +filter_taxa_from_otu_table.py + --input_otu_table_fp '$input_otu_table_fp' + --output_otu_table_fp '$output_otu_table_fp' + #if str($positive_taxa) != '' + --positive_taxa '$positive_taxa' + #end if + #if str($negative_taxa) != '' + --negative_taxa '$negative_taxa' + #end if + --metadata_field '$metadata_field' ]]></command> <inputs> <param argument="--input_otu_table_fp" type="data" format="biom1" label="Input OTU table to filter"/>