diff filter_taxa_from_otu_table.xml @ 5:95a39cd8a53a draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit 3b54163c4f7daff76fcc589c4a9057bb03904380

--- a/filter_taxa_from_otu_table.xml	Mon Jul 10 16:45:08 2017 -0400
+++ b/filter_taxa_from_otu_table.xml	Sat Aug 05 07:32:36 2017 -0400
@@ -1,21 +1,21 @@
-<tool id="qiime_filter_taxa_from_otu_table" name="Filter taxa from otu table" version="@WRAPPER_VERSION@.0">
-    <description>Filter taxa from an OTU table</description>
+<tool id="qiime_filter_taxa_from_otu_table" name="Filter taxa from an OTU table" version="@WRAPPER_VERSION@.0">
+    <description>(filter_taxa_from_otu_table)</description>
     <macros>
         <import>macros.xml</import>
     </macros>
     <expand macro="requirements"/>
     <version_command>filter_taxa_from_otu_table.py --version</version_command>
     <command detect_errors="aggressive"><![CDATA[
-        filter_taxa_from_otu_table.py
-            --input_otu_table_fp '$input_otu_table_fp'
-            --output_otu_table_fp '$output_otu_table_fp'
-            #if str($positive_taxa) != ''
-                --positive_taxa '$positive_taxa'
-            #end if
-            #if str($negative_taxa) != ''
-                --negative_taxa '$negative_taxa'
-            #end if
-            --metadata_field '$metadata_field'
+filter_taxa_from_otu_table.py
+    --input_otu_table_fp '$input_otu_table_fp'
+    --output_otu_table_fp '$output_otu_table_fp'
+    #if str($positive_taxa) != ''
+        --positive_taxa '$positive_taxa'
+    #end if
+    #if str($negative_taxa) != ''
+        --negative_taxa '$negative_taxa'
+    #end if
+    --metadata_field '$metadata_field'
     ]]></command>
     <inputs>
         <param argument="--input_otu_table_fp" type="data" format="biom1" label="Input OTU table to filter"/>