Mercurial > repos > iuc > qiime_multiple_join_paired_ends
comparison multiple_join_paired_ends.xml @ 7:57a2424d0893 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c845cb240f57663cf1e2240c5c506ea0b294872c"
| author | iuc |
|---|---|
| date | Thu, 05 Dec 2019 07:37:12 -0500 |
| parents | e13fb0cbfd8c |
| children |
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| 6:5f447ef58396 | 7:57a2424d0893 |
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| 1 <tool id="qiime_multiple_join_paired_ends" name="Run join_paired_ends on multiple files" version="@WRAPPER_VERSION@.0"> | 1 <tool id="qiime_multiple_join_paired_ends" name="Run join_paired_ends on multiple files" version="@WRAPPER_VERSION@.0" profile="@PROFILE@"> |
| 2 <description>(multiple_join_paired_ends)</description> | 2 <description>(multiple_join_paired_ends)</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <expand macro="requirements"> | 6 <expand macro="requirements"> |
| 7 <requirement type="package" version="1.3.1">fastq-join</requirement> | 7 <requirement type="package" version="1.3.1">fastq-join</requirement> |
| 8 </expand> | 8 </expand> |
| 9 <version_command>multiple_join_paired_ends.py -v</version_command> | 9 <version_command>multiple_join_paired_ends.py -v</version_command> |
| 10 <command detect_errors="aggressive"><![CDATA[ | 10 <command detect_errors="aggressive"><![CDATA[ |
| 11 @MPLBACKEND@ | |
| 11 mkdir input | 12 mkdir input |
| 12 && | 13 && |
| 13 #set $match_barcodes = "no" | 14 #set $match_barcodes = "no" |
| 14 #for $i, $s in enumerate( $input_files ) | 15 #for $i, $s in enumerate( $input_files ) |
| 15 cp '$s.r1_file' input/forward_${i}.fastq | 16 cp '$s.r1_file' input/forward_${i}.fastq |