Mercurial > repos > iuc > qiime_validate_mapping_file
changeset 7:d1701fcfd7e5 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c845cb240f57663cf1e2240c5c506ea0b294872c"
| author | iuc |
|---|---|
| date | Thu, 05 Dec 2019 08:03:16 -0500 |
| parents | 1fe225d38243 |
| children | |
| files | macros.xml validate_mapping_file.xml |
| diffstat | 2 files changed, 4 insertions(+), 1 deletions(-) [+] |
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--- a/macros.xml Tue Oct 30 19:47:53 2018 -0400 +++ b/macros.xml Thu Dec 05 08:03:16 2019 -0500 @@ -1,6 +1,8 @@ <?xml version="1.0" ?> <macros> + <token name="@PROFILE@">18.01</token> <token name="@WRAPPER_VERSION@">1.9.1</token> + <token name="@MPLBACKEND@"><![CDATA[export MPLBACKEND=Agg && echo "backend:agg" > matplotlibrc &&]]></token> <xml name="requirements"> <requirements> <requirement type="package" version="@WRAPPER_VERSION@">qiime</requirement>
--- a/validate_mapping_file.xml Tue Oct 30 19:47:53 2018 -0400 +++ b/validate_mapping_file.xml Thu Dec 05 08:03:16 2019 -0500 @@ -1,4 +1,4 @@ -<tool id="qiime_validate_mapping_file" name="Check user's metadata mapping file" version="@WRAPPER_VERSION@.0"> +<tool id="qiime_validate_mapping_file" name="Check user's metadata mapping file" version="@WRAPPER_VERSION@.0" profile="@PROFILE@"> <description> for required data, valid format (validate_mapping_file)</description> <macros> <import>macros.xml</import> @@ -6,6 +6,7 @@ <expand macro="requirements"/> <version_command>validate_mapping_file.py --version</version_command> <command detect_errors="aggressive"><![CDATA[ +@MPLBACKEND@ validate_mapping_file.py --mapping_fp '$mapping_fp' -o validate_mapping_file_output