Mercurial > repos > iuc > quast
annotate test-data/test2_missasemblies.tab @ 9:45924fa8d8c5 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
author | iuc |
---|---|
date | Mon, 08 Nov 2021 09:03:00 +0000 |
parents | |
children |
rev | line source |
---|---|
9
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
1 All statistics are based on contigs of size >= 500 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs). |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
2 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
3 Assembly contig1 contig2 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
4 # misassemblies 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
5 # contig misassemblies 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
6 # c. relocations 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
7 # c. translocations 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
8 # c. inversions 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
9 # scaffold misassemblies 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
10 # s. relocations 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
11 # s. translocations 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
12 # s. inversions 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
13 # misassembled contigs 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
14 Misassembled contigs length 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
15 # local misassemblies 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
16 # scaffold gap ext. mis. 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
17 # scaffold gap loc. mis. 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
18 # unaligned mis. contigs 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
19 # mismatches 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
20 # indels 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
21 # indels (<= 5 bp) 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
22 # indels (> 5 bp) 0 0 |
45924fa8d8c5
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
iuc
parents:
diff
changeset
|
23 Indels length 0 0 |