# HG changeset patch
# User iuc
# Date 1638006320 0
# Node ID 7594365c546ba25ad49ef3bb53308ee0bb35cb66
# Parent  342a1d1fed7bb478bd8a7c20f13dd21a6587c9bb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 0e504686e4ed0ff13e84e4c6b3631a1d1f0bd36f"

diff -r 342a1d1fed7b -r 7594365c546b macros.xml
--- a/macros.xml	Mon Nov 08 11:26:22 2021 +0000
+++ b/macros.xml	Sat Nov 27 09:45:20 2021 +0000
@@ -11,7 +11,7 @@
         </xrefs>
     </xml>
     <token name="@TOOL_VERSION@">5.0.2</token>
-    <token name="@VERSION_SUFFIX@">2</token>
+    <token name="@VERSION_SUFFIX@">3</token>
     <xml name="gene_thresholds">
         <param name="gene_thresholds" argument="--gene-thresholds" type="text" value="0,300,1500,3000" label="Comma-separated list of thresholds (in bp) for gene lengths to find with a finding tool"/>
     </xml>
diff -r 342a1d1fed7b -r 7594365c546b quast.xml
--- a/quast.xml	Mon Nov 08 11:26:22 2021 +0000
+++ b/quast.xml	Sat Nov 27 09:45:20 2021 +0000
@@ -119,6 +119,7 @@
 --min-alignment $alignments.min_alignment
 --min-identity $alignments.min_identity
 --ambiguity-usage '$alignments.ambiguity_usage'
+--ambiguity-score '$alignments.ambiguity_score'
 $alignments.fragmented
 $alignments.upper_bound_assembly
 #if $alignments.upper_bound_min_con