diff macros.xml @ 0:e01c989c7543 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/raceid commit 39918bfdb08f06862ca395ce58a6f5e4f6dd1a5e
author iuc
date Sat, 03 Mar 2018 17:34:16 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/macros.xml	Sat Mar 03 17:34:16 2018 -0500
@@ -0,0 +1,37 @@
+<?xml version="1.0"?>
+<macros>
+    <xml name="citations">
+        <citations>
+            <citation type="doi">10.1038/nature14966</citation>
+        </citations>
+    </xml>
+    <xml name="requirements">
+        <requirements>
+            <requirement type="package" >r</requirement>
+            <requirement type="package" >r-tsne</requirement>
+            <requirement type="package" >r-pheatmap</requirement>
+            <requirement type="package" >r-mass</requirement>
+            <requirement type="package" >r-mclust</requirement>
+            <requirement type="package" >r-flexmix</requirement>
+            <requirement type="package" >r-lattice</requirement>
+            <requirement type="package" >r-fpc</requirement>
+            <requirement type="package" >r-rcolorbrewer</requirement>
+            <requirement type="package" >r-permute</requirement>
+            <requirement type="package" >r-amap</requirement>
+            <requirement type="package" >r-locfit</requirement>
+        </requirements>
+    </xml>
+    <token name="@VERSION@">1.0</token>
+    <token name="@SCRIPT_DIR@">$__tool_directory__/scripts</token>
+    
+    <!-- Set hidden/retired outputs -->
+    <token name="@out_rdat_filter@">out_rdat_filter.rds</token>
+    <token name="@out_rdat_kmeans@">out_rdat_kmeans.rds</token>
+    <token name="@out_rdat_outlier@">out_rdat_outlier.rds</token>
+
+    <!-- Set hidden/retired inputs -->
+    <!-- tsne -> outlier -> kmeans -> filter -->
+    <token name="@inp_rdat_kmeans@">out_rdat_filter.rds</token>
+    <token name="@inp_rdat_outlier@">out_rdat_kmeans.rds</token>
+    <token name="@inp_rdat_tsne@">out_rdat_outlier.rds</token>   
+</macros>