recentrifuge: test-data/centrifuge_test/test4

annotate test-data/centrifuge_test/test4_tsv.html @ 2:824497684a1f draft

planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit e2468398e4a098eb781cc3e3935bb2c8e74c270a

author	iuc
date	Mon, 31 Oct 2022 18:18:11 +0000
parents	fe733f05c2f8
children	12f0968f171c

rev	line source
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fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2 <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"><head><meta charset="utf-8"><link rel="shortcut icon" 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fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4 // PURPOSE
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6 // Krona is a flexible tool for exploring the relative proportions of
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	7 // hierarchical data, such as metagenomic classifications, using a
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	8 // radial, space-filling display. It is implemented using HTML5 and
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	9 // JavaScript, allowing charts to be explored locally or served over the
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	10 // Internet, requiring only a current version of any major web
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	11 // browser. Krona charts can be created using an Excel template or from
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	12 // common bioinformatic formats using the provided conversion scripts.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	13 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	14 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	15 // COPYRIGHT LICENSE
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	16 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	17 // Copyright (c) 2011, Battelle National Biodefense Institute (BNBI);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	18 // all rights reserved. Authored by: Brian Ondov, Nicholas Bergman, and
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	19 // Adam Phillippy
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	20 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	21 // This Software was prepared for the Department of Homeland Security
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	22 // (DHS) by the Battelle National Biodefense Institute, LLC (BNBI) as
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	23 // part of contract HSHQDC-07-C-00020 to manage and operate the National
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	24 // Biodefense Analysis and Countermeasures Center (NBACC), a Federally
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	25 // Funded Research and Development Center.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	26 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	27 // Redistribution and use in source and binary forms, with or without
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	28 // modification, are permitted provided that the following conditions are
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	29 // met:
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	30 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	31 // * Redistributions of source code must retain the above copyright
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	32 // notice, this list of conditions and the following disclaimer.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	33 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	34 // * Redistributions in binary form must reproduce the above copyright
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	35 // notice, this list of conditions and the following disclaimer in the
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	36 // documentation and/or other materials provided with the distribution.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	37 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	38 // * Neither the name of the Battelle National Biodefense Institute nor
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	39 // the names of its contributors may be used to endorse or promote
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	40 // products derived from this software without specific prior written
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	41 // permission.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	42 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	43 // THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	44 // "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	45 // LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	46 // A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	47 // HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	48 // SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	49 // LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	50 // DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	51 // THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	52 // (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	53 // OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	54 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	55 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	56 // TRADEMARK LICENSE
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	57 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	58 // KRONA(TM) is a trademark of the Department of Homeland Security, and use
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	59 // of the trademark is subject to the following conditions:
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	60 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	61 // * Distribution of the unchanged, official code/software using the
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	62 // KRONA(TM) mark is hereby permitted by the Department of Homeland
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	63 // Security, provided that the software is distributed without charge
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	64 // and modification.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	65 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	66 // * Distribution of altered source code/software using the KRONA(TM) mark
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	67 // is not permitted unless written permission has been granted by the
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	68 // Department of Homeland Security.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	69 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	70 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	71 // FOR MORE INFORMATION VISIT
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	72 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	73 // https://github.com/marbl/Krona/wiki/
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	74 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	75 //----------------------------------------------------------------------------
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	76 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	77 // Copyright (C) 2017-2022 Jose Manuel Martí Martínez, for the changes in
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	78 // this file from the Krona Javascript 2.0 release.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	79 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	80 // Redistribution and use in source and binary forms, with or without
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	81 // modification, are permitted provided that the above copyright notice is
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	82 // reproduced and all the above conditions are met.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	83 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	84 // The KRONA(TM) mark has been substituted in the generated charts by
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	85 // another logo in compliance with the above-stated conditions.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	86 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	87 // FOR MORE INFORMATION VISIT
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	88 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	89 // https://github.com/khyox/recentrifuge/wiki/
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	90 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	91 //----------------------------------------------------------------------------
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	92 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	93
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	94 ///////////////
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	95 // Variables //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	96 ///////////////
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	97
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	98 var canvas;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	99 var canvasButtons = []; // Keep trace of CanvasButton objects
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	100 var ChartEnum = Object.freeze({
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	101 TAXOMIC: 'taxonomic',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	102 GENOMIC: 'genomic'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	103 })
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	104 var chart = ChartEnum.TAXOMIC
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	105 var context;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	106 var svg; // for snapshot mode
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	107 var collapse = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	108 var collapseCheckBox;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	109 var collapseLast;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	110 var compress;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	111 var compressCheckBox;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	112 var maxAbsoluteDepthText;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	113 var maxAbsoluteDepthButtonDecrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	114 var maxAbsoluteDepthButtonIncrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	115 var fontSize = 12;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	116 var fontSizeText;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	117 var fontSizeButtonDecrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	118 var fontSizeButtonIncrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	119 var fontSizeLast;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	120 var bkgBright = "eeeeee";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	121 var bkgBrightButtonDecrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	122 var bkgBrightButtonIncrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	123 var radiusButtonDecrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	124 var radiusButtonIncrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	125 var shorten;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	126 var shortenCheckBox;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	127 var maxAbsoluteDepth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	128 var backButton;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	129 var upButton;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	130 var forwardButton;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	131 var snapshotButton;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	132 var snapshotMode = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	133 var details;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	134 var detailsName;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	135 var search;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	136 var searchResults;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	137 var nSearchResults;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	138 var useHueCheckBox;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	139 var useHueDiv;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	140 var sortByScoreCheckBox;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	141 var datasetDropDown;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	142 var datasetButtonLast;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	143 var datasetButtonPrev;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	144 var datasetButtonNext;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	145 var rankDropDown;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	146 var keyControl;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	147 var showKeys = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	148 var linkButton;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	149 var linkText;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	150 var frame;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	151
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	152 // Node references. Note that the meanings of 'selected' and 'focused' are
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	153 // swapped in the docs.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	154 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	155 var head; // the root of the entire tree
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	156 var selectedNode = 0; // the root of the current view
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	157 var focusNode = 0; // a node chosen for more info (single-click)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	158 var highlightedNode = 0; // mouse hover node
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	159 var highlightingHidden = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	160 var nodes = new Array(); // Array with all the nodes
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	161 var nodesIndex; // Index of nodes, points last using hue(score) buttons
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	162 var currentNodeID = 0; // to iterate while loading
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	163
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	164 var nodeHistory = new Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	165 var nodeHistoryPosition = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	166
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	167 var dataEnabled = false; // true when supplemental files are present
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	168
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	169 // store non-Krona GET variables so they can be passed on to links
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	170 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	171 var getVariables = new Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	172
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	173 // selectedNodeLast is separate from the history, since we need to check
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	174 // properties of the last node viewed when browsing through the history
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	175 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	176 var selectedNodeLast = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	177 var zoomOut = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	178
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	179 // temporary zoom-in while holding the mouse button on a wedge
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	180 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	181 var quickLook = false; // true when in quick look state
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	182 var mouseDown = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	183 var mouseDownTime; // to detect mouse button hold
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	184 var quickLookHoldLength = 200;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	185
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	186 var imageWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	187 var imageHeight;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	188 var centerX;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	189 var centerY;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	190 var gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	191 var updateViewNeeded = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	192
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	193 // Determines the angle that the pie chart starts at. 90 degrees makes the
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	194 // center label consistent with the children.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	195 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	196 var rotationOffset = Math.PI / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	197
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	198 var buffer;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	199 var bufferFactor = .1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	200
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	201 // The maps are the small pie charts showing the current slice being viewed.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	202 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	203 var mapBuffer = 10;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	204 var mapRadius = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	205 var maxMapRadius = 25;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	206 var mapWidth = 150;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	207 var maxLabelOverhang = Math.PI * 4.18;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	208
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	209 // Keys are the labeled boxes for slices in the highest level that are too thin
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	210 // to label.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	211 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	212 var maxKeySizeFactor = 2; // will be multiplied by font size
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	213 var keySize;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	214 var keys;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	215 var keyBuffer = 10;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	216 var currentKey;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	217 var keyMinTextLeft;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	218 var keyMinAngle;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	219
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	220 var minRingWidthFactor = 5; // will be multiplied by font size
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	221 var maxPossibleDepth; // the theoretical max that can be displayed
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	222 var maxDisplayDepth; // the actual depth that will be displayed
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	223 var headerHeight = 0;//document.getElementById('options').clientHeight;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	224 var historySpacingFactor = 1.6; // will be multiplied by font size
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	225 var historyAlphaDelta = .25;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	226
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	227 // appearance
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	228 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	229 var lineOpacity = 0.3;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	230 var saturation = 0.5;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	231 var lightnessBase = 0.6;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	232 var lightnessMax = .8;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	233 var thinLineWidth = .3;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	234 var highlightLineWidth = 1.5;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	235 var labelBoxBuffer = 6;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	236 var labelBoxRounding = 15;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	237 var labelWidthFudge = 1.05; // The width of unshortened labels are set slightly
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	238 // longer than the name width so the animation
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	239 // finishes faster.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	240 var fontNormal;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	241 var fontBold;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	242 var fontFamily = 'sans-serif';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	243 //var fontFaceBold = 'bold Arial';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	244 var nodeRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	245 var angleFactor;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	246 var tickLength;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	247 var compressedRadii;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	248
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	249 // colors
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	250 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	251 var highlightFill = 'rgba(255, 255, 255, .3)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	252 var colorUnclassified = 'rgb(220,220,220)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	253
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	254 // label staggering
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	255 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	256 var labelOffsets; // will store the current offset at each depth
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	257 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	258 // This will store pointers to the last node that had a label in each offset
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	259 // (or "track") of each depth. These will be used to shorten neighboring
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	260 // labels that would overlap. The [nLabelNodes] index will store the last node
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	261 // with a radial label. labelFirstNodes is the same, but to check for going all
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	262 // the way around and overlapping the first labels.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	263 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	264 var labelLastNodes;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	265 var labelFirstNodes;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	266 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	267 var nLabelOffsets = 3; // the number of offsets to use
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	268
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	269 var mouseX = -1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	270 var mouseY = -1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	271 var mouseXRel = -1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	272 var mouseYRel = -1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	273
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	274 // tweening
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	275 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	276 var progress = 0; // for tweening; goes from 0 to 1.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	277 var progressLast = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	278 var tweenFactor = 0; // progress converted by a curve for a smoother effect.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	279 var tweenLength = 850; // in ms
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	280 var tweenCurvature = 13;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	281 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	282 // tweenMax is used to scale the sigmoid function so its range is [0,1] for the
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	283 // domain [0,1]
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	284 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	285 var tweenMax = 1 / (1 + Math.exp(-tweenCurvature / 2));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	286 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	287 var tweenStartTime;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	288
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	289 // for framerate debug
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	290 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	291 var tweenFrames = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	292 var fpsDisplay = document.getElementById('frameRate');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	293
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	294 // Arrays to translate xml attribute names into displayable attribute names
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	295 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	296 var attributes = [];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	297 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	298 var magnitudeIndex; // the index of attribute arrays used for magnitude
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	299 var membersAssignedIndex;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	300 var membersSummaryIndex;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	301
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	302 // For defining gradients
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	303 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	304 var hueDisplayName;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	305 var hueStopPositions;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	306 var hueStopHues;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	307 var hueStopText;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	308
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	309 // multiple datasets
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	310 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	311 const DEFAULT_RANK = 'SUMMARY';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	312 const NO_RANK = 'NONE';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	313 var currentRank = DEFAULT_RANK;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	314 var currentDataset = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	315 var lastDataset = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	316 var datasets = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	317 var datasetNames;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	318 const DATASET_MAX_SIZE = 20; // Max size in rows of the dataset selection list
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	319 var datasetsVisible = 1; // Number of datasets not hidden
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	320 var datasetAlpha = new Tween(0, 0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	321 var datasetWidths = [];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	322 var datasetChanged;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	323 var datasetSelectWidth = 50;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	324 var numRawSamples;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	325 var stats;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	326
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	327 window.onload = load;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	328
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	329 var image;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	330 var hiddenPattern;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	331 var loadingImage;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	332 var logoImage;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	333
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	334 // Setup CSS-like style of tooltips for attributes
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	335 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	336 var csstring = '.CellWithTooltip{ position:relative; }\n' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	337 '.Tooltip{ display:none;position:absolute;z-index:100;border:2px;' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	338 'background-color:white;border-style:solid;border-width:2px;' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	339 'border-color:red;padding:3px;color:red;top:20px;left:0px; }' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	340 '.CellWithTooltip:hover span.Tooltip{ display:block; }';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	341 var style = document.createElement('style');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	342 if (style.styleSheet) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	343 style.styleSheet.cssText = csstring;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	344 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	345 style.appendChild(document.createTextNode(csstring));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	346 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	347 document.getElementsByTagName('head')[0].appendChild(style);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	348
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	349 ///////////////
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	350 // Functions //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	351 ///////////////
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	352
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	353 function backingScale() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	354 if ('devicePixelRatio' in window) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	355 if (window.devicePixelRatio > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	356 return window.devicePixelRatio;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	357 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	358 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	359
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	360 return 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	361 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	362
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	363 function resize() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	364 imageWidth = window.innerWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	365 imageHeight = window.innerHeight;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	366
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	367 if (!snapshotMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	368 context.canvas.width = imageWidth * backingScale();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	369 context.canvas.height = imageHeight * backingScale();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	370 context.canvas.style.width = imageWidth + "px"
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	371 context.canvas.style.height = imageHeight + "px"
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	372 context.scale(backingScale(), backingScale());
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	373 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	374
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	375 if (datasetDropDown) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	376 var ratio =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	377 (datasetDropDown.offsetTop + datasetDropDown.clientHeight) * 2 /
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	378 imageHeight;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	379
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	380 if (ratio > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	381 ratio = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	382 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	383
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	384 ratio = Math.sqrt(ratio);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	385
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	386 datasetSelectWidth =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	387 (datasetDropDown.offsetLeft + datasetDropDown.clientWidth) * ratio;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	388 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	389 var leftMargin = datasets > 1 ? datasetSelectWidth + 30 : 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	390 var minDimension = imageWidth - mapWidth - leftMargin > imageHeight ?
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	391 imageHeight :
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	392 imageWidth - mapWidth - leftMargin;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	393
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	394 maxMapRadius = minDimension * .03;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	395 buffer = minDimension * bufferFactor;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	396 margin = minDimension * .015;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	397 centerX = (imageWidth - mapWidth - leftMargin) / 2 + leftMargin;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	398 centerY = imageHeight / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	399 gRadius = minDimension / 2 - buffer;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	400 //context.font = '11px sans-serif';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	401 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	402
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	403 function handleResize() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	404 updateViewNeeded = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	405 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	406
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	407 function Attribute() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	408 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	409
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	410 function SampleStats(sample, ictrl, sread, sclas, sfilt, scmin, scavg, scmax,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	411 lnmin, lnavg, lnmax, tclas, tfilt, tfold) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	412 // Class to store the statistics of a sample
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	413 this.sample = sample;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	414 this.is_ctrl = (ictrl === 'True');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	415 this.sread = sread;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	416 this.sclas = sclas;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	417 this.sfilt = sfilt;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	418 this.scmin = scmin;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	419 this.scavg = scavg;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	420 this.scmax = scmax;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	421 this.lnmin = lnmin;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	422 this.lnavg = lnavg;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	423 this.lnmax = lnmax;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	424 this.tclas = tclas;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	425 this.tfilt = tfilt;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	426 this.tfold = tfold;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	427 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	428
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	429 function CanvasButton(name, x, y, w, h, fill) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	430 // Constructor for a button in the canvas
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	431 this.name = name;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	432 this.x = x \|\| 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	433 this.y = y \|\| 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	434 this.w = w \|\| 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	435 this.h = h \|\| 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	436 this.fill = fill \|\| '#000000';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	437
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	438 // Draws the button to a given context
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	439 this.draw = function (ctx) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	440 var oldAlpha = ctx.globalAlpha
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	441 ctx.globalAlpha = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	442 ctx.strokeStyle = '#' + bkgBright;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	443 ctx.lineWidth = 3;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	444 ctx.strokeRect(this.x, this.y, this.w, this.h);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	445 ctx.fillStyle = this.fill;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	446 ctx.fillRect(this.x, this.y, this.w, this.h);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	447 ctx.strokeStyle = '#000000';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	448 ctx.lineWidth = 0.5;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	449 ctx.strokeRect(this.x, this.y, this.w, this.h);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	450 // Draws symbols in buttons
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	451 ctx.fillStyle = '#000000';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	452 ctx.globalAlpha = 0.7;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	453 switch (this.name) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	454 case 'mostScore':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	455 ctx.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	456 ctx.moveTo(this.x + 1 * this.w / 2, this.y + this.h / 8);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	457 ctx.lineTo(this.x + 1 * this.w / 6, this.y + this.h / 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	458 ctx.lineTo(this.x + 5 * this.w / 6, this.y + this.h / 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	459 ctx.fill();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	460 case 'moreScore':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	461 ctx.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	462 ctx.moveTo(this.x + 1 * this.w / 2, this.y + 1 * this.h / 4);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	463 ctx.lineTo(this.x + 1 * this.w / 6, this.y + 3 * this.h / 4);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	464 ctx.lineTo(this.x + 5 * this.w / 6, this.y + 3 * this.h / 4);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	465 ctx.fill();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	466 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	467 case 'lestScore':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	468 ctx.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	469 ctx.moveTo(this.x + 1 * this.w / 2, this.y + 7 * this.h / 8);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	470 ctx.lineTo(this.x + 1 * this.w / 6, this.y + 1 * this.h / 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	471 ctx.lineTo(this.x + 5 * this.w / 6, this.y + 1 * this.h / 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	472 ctx.fill();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	473 case 'lessScore':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	474 ctx.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	475 ctx.moveTo(this.x + 1 * this.w / 2, this.y + 3 * this.h / 4);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	476 ctx.lineTo(this.x + 1 * this.w / 6, this.y + 1 * this.h / 4);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	477 ctx.lineTo(this.x + 5 * this.w / 6, this.y + 1 * this.h / 4);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	478 ctx.fill();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	479 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	480 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	481 ctx.globalAlpha = oldAlpha
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	482 };
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	483
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	484 // Determine if a point is inside the button's bounds
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	485 this.is_inside = function (mx, my) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	486 // Check the Mouse X,Y fall in the button's area
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	487 return (this.x <= mx) && (this.x + this.w >= mx) &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	488 (this.y <= my) && (this.y + this.h >= my);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	489 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	490 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	491
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	492 function Tween(start, end) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	493 this.start = start;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	494 this.end = end;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	495 this.current = this.start;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	496
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	497 this.current = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	498 if (progress == 1 \|\| this.start == this.end) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	499 return this.end;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	500 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	501 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	502 return this.start + tweenFactor * (this.end - this.start);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	503 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	504 };
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	505
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	506 this.setTarget = function (target) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	507 this.start = this.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	508 this.end = target;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	509 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	510 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	511
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	512 function Node() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	513 this.id = currentNodeID;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	514 currentNodeID++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	515 nodes[this.id] = this;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	516
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	517 this.angleStart = new Tween(Math.PI, 0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	518 this.angleEnd = new Tween(Math.PI, 0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	519 this.radiusInner = new Tween(1, 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	520 this.labelRadius = new Tween(1, 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	521 this.labelWidth = new Tween(0, 0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	522 this.scale = new Tween(1, 1); // TEMP
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	523 this.radiusOuter = new Tween(1, 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	524
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	525 this.r = new Tween(255, 255);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	526 this.g = new Tween(255, 255);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	527 this.b = new Tween(255, 255);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	528
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	529 this.alphaLabel = new Tween(0, 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	530 this.alphaLine = new Tween(0, 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	531 this.alphaArc = new Tween(0, 0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	532 this.alphaWedge = new Tween(0, 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	533 this.alphaOther = new Tween(0, 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	534 this.alphaPattern = new Tween(0, 0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	535 this.children = Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	536 this.parent = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	537
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	538 this.attributes = new Array(attributes.length);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	539
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	540 this.addChild = function (child) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	541 this.children.push(child);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	542 };
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	543
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	544 this.addLabelNode = function (depth, labelOffset) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	545 if (labelHeadNodes[depth][labelOffset] == 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	546 // this will become the head node for this list
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	547
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	548 labelHeadNodes[depth][labelOffset] = this;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	549 this.labelPrev = this;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	550 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	551
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	552 var head = labelHeadNodes[depth][labelOffset];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	553
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	554 this.labelNext = head;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	555 this.labelPrev = head.labelPrev;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	556 head.labelPrev.labelNext = this;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	557 head.labelPrev = this;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	558 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	559
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	560 this.canDisplayDepth = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	561 // whether this node is at a depth that can be displayed, according
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	562 // to the max absolute depth
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	563
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	564 return this.depth <= maxAbsoluteDepth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	565 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	566
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	567 this.canDisplayHistory = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	568 var radiusInner;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	569
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	570 if (compress) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	571 radiusInner = compressedRadii[0];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	572 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	573 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	574 radiusInner = nodeRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	575 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	576
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	577 return (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	578 -this.labelRadius.end * gRadius +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	579 historySpacingFactor * fontSize / 2 <
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	580 radiusInner * gRadius
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	581 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	582 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	583
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	584 this.canDisplayLabelCurrent = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	585 return (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	586 (this.angleEnd.current() - this.angleStart.current()) *
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	587 (this.radiusInner.current() * gRadius + gRadius) >=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	588 minWidth());
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	589 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	590
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	591 this.checkHighlight = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	592 if (this.children.length == 0 && this == focusNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	593 //return false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	594 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	595
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	596 if (this.hide) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	597 return false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	598 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	599
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	600 if (this.radiusInner.end == 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	601 // compressed to the outside; don't check
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	602
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	603 return false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	604 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	605
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	606 var highlighted = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	607
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	608 var angleStartCurrent = this.angleStart.current() + rotationOffset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	609 var angleEndCurrent = this.angleEnd.current() + rotationOffset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	610 var radiusInner = this.radiusInner.current() * gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	611
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	612 for (var i = 0; i < this.children.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	613 highlighted = this.children[i].checkHighlight();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	614
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	615 if (highlighted) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	616 return true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	617 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	618 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	619
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	620 if (this.radial) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	621 var angleText = (angleStartCurrent + angleEndCurrent) / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	622 var radiusText = (gRadius + radiusInner) / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	623
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	624 context.rotate(angleText);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	625 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	626 context.moveTo(radiusText, -fontSize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	627 context.lineTo(radiusText, fontSize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	628 context.lineTo(radiusText + centerX, fontSize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	629 context.lineTo(radiusText + centerX, -fontSize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	630 context.closePath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	631 context.rotate(-angleText);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	632
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	633 if (context.isPointInPath(mouseXRel, mouseYRel)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	634 var label = String(this.getPercentage()) + '%' + ' '
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	635 + this.name;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	636
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	637 if (this.searchResultChildren()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	638 label += searchResultString(this.searchResultChildren());
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	639 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	640
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	641 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	642 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	643 Math.sqrt((mouseXRel) * (mouseXRel)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	644 + (mouseYRel) * (mouseYRel)) / backingScale() <
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	645 radiusText + measureText(label)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	646 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	647 highlighted = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	648 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	649 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	650 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	651 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	652 for (var i = 0; i < this.hiddenLabels.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	653 var hiddenLabel = this.hiddenLabels[i];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	654
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	655 context.rotate(hiddenLabel.angle);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	656 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	657 context.moveTo(gRadius, -fontSize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	658 context.lineTo(gRadius, fontSize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	659 context.lineTo(gRadius + centerX, fontSize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	660 context.lineTo(gRadius + centerX, -fontSize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	661 context.closePath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	662 context.rotate(-hiddenLabel.angle);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	663
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	664 if (context.isPointInPath(mouseXRel, mouseYRel)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	665 var label = String(hiddenLabel.value) + ' more';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	666
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	667 if (hiddenLabel.search) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	668 label += searchResultString(hiddenLabel.search);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	669 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	670
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	671 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	672 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	673 Math.sqrt((mouseXRel) * (mouseXRel)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	674 + (mouseYRel) * (mouseYRel)) / backingScale() <
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	675 gRadius + fontSize + measureText(label)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	676 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	677 highlighted = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	678 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	679 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	680 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	681 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	682 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	683
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	684 if (!highlighted && this != selectedNode && !this.getCollapse()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	685 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	686 context.arc(0, 0, radiusInner, angleStartCurrent, angleEndCurrent,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	687 false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	688 context.arc(0, 0, gRadius, angleEndCurrent, angleStartCurrent,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	689 true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	690 context.closePath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	691
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	692 if (context.isPointInPath(mouseXRel, mouseYRel)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	693 highlighted = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	694 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	695
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	696 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	697 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	698 !highlighted &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	699 (angleEndCurrent - angleStartCurrent) *
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	700 (radiusInner + gRadius) <
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	701 minWidth() &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	702 this.getDepth() == selectedNode.getDepth() + 1
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	703 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	704 if (showKeys && this.checkHighlightKey()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	705 highlighted = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	706 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	707 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	708 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	709
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	710 if (highlighted) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	711 if (this != highlightedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	712 // document.body.style.cursor='pointer';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	713 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	714
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	715 highlightedNode = this;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	716 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	717
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	718 return highlighted;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	719 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	720
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	721 this.checkHighlightCenter = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	722 if (!this.canDisplayHistory()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	723 return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	724 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	725
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	726 var cx = centerX;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	727 var cy = centerY - this.labelRadius.end * gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	728 //var dim = context.measureText(this.name);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	729
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	730 var width = this.nameWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	731
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	732 if (this.searchResultChildren()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	733 var results = searchResultString(this.searchResultChildren());
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	734 var dim = context.measureText(results);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	735 width += dim.width;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	736 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	737
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	738 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	739 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	740 mouseX > cx - width / 2 &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	741 mouseX < cx + width / 2 &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	742 mouseY > cy - historySpacingFactor * fontSize / 2 &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	743 mouseY < cy + historySpacingFactor * fontSize / 2
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	744 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	745 highlightedNode = this;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	746 return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	747 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	748
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	749 if (this.getParent()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	750 this.getParent().checkHighlightCenter();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	751 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	752 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	753
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	754 this.checkHighlightKey = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	755 var offset = keyOffset();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	756
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	757 var xMin = imageWidth - keySize - margin - this.keyNameWidth
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	758 - keyBuffer;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	759 var xMax = imageWidth - margin;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	760 var yMin = offset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	761 var yMax = offset + keySize;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	762
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	763 currentKey++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	764
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	765 return (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	766 mouseX > xMin &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	767 mouseX < xMax &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	768 mouseY > yMin &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	769 mouseY < yMax);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	770 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	771
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	772 this.checkHighlightMap = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	773 if (this.parent) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	774 this.parent.checkHighlightMap();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	775 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	776
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	777 if (this.getCollapse() \|\| this == focusNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	778 return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	779 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	780
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	781 var box = this.getMapPosition();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	782
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	783 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	784 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	785 mouseX > box.x - mapRadius &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	786 mouseX < box.x + mapRadius &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	787 mouseY > box.y - mapRadius &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	788 mouseY < box.y + mapRadius
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	789 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	790 highlightedNode = this;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	791 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	792 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	793
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	794 /* this.collapse = function()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	795 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	796 for (var i = 0; i < this.children.length; i++ )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	797 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	798 this.children[i] = this.children[i].collapse();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	799 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	800
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	801 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	802 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	803 this.children.length == 1 &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	804 this.children[0].magnitude == this.magnitude
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	805 )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	806 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	807 this.children[0].parent = this.parent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	808 this.children[0].getDepth() = this.parent.getDepth() + 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	809 return this.children[0];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	810 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	811 else
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	812 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	813 return this;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	814 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	815 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	816 */
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	817 this.draw = function (labelMode, selected, searchHighlighted) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	818 var depth = this.getDepth() - selectedNode.getDepth() + 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	819 // var hidden = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	820
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	821 if (selectedNode == this) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	822 selected = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	823 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	824
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	825 var angleStartCurrent = this.angleStart.current() + rotationOffset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	826 var angleEndCurrent = this.angleEnd.current() + rotationOffset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	827 var radiusInner = this.radiusInner.current() * gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	828 var canDisplayLabelCurrent = this.canDisplayLabelCurrent();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	829 var hiddenSearchResults = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	830
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	831 /* if ( ! this.hide )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	832 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	833 for ( var i = 0; i < this.children.length; i++ )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	834 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	835 if ( this.children[i].hide && this.children[i].searchResults )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	836 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	837 hiddenSearchResults = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	838 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	839 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	840 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	841 */
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	842 var drawChildren =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	843 (!this.hide \|\| !this.hidePrev && progress < 1) &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	844 (!this.hideAlone \|\| !this.hideAlonePrev && progress < 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	845
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	846 // if ( this.alphaWedge.current() > 0 \|\| this.alphaLabel.current() > 0 )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	847 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	848 var lastChildAngleEnd = angleStartCurrent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	849
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	850 if (this.hasChildren())//canDisplayChildren )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	851 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	852 lastChildAngleEnd =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	853 this.children[this.children.length - 1].angleEnd.current()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	854 + rotationOffset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	855 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	856
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	857 if (labelMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	858 var drawRadial =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	859 !(
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	860 this.parent &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	861 this.parent != selectedNode &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	862 angleEndCurrent == this.parent.angleEnd.current()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	863 + rotationOffset
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	864 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	865
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	866 //if ( angleStartCurrent != angleEndCurrent )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	867 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	868 this.drawLines(angleStartCurrent, angleEndCurrent,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	869 radiusInner, drawRadial, selected);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	870 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	871
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	872 var alphaOtherCurrent = this.alphaOther.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	873 var childRadiusInner;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	874
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	875 if (this == selectedNode \|\| alphaOtherCurrent) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	876 childRadiusInner =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	877 this.children.length ?
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	878 this.children[this.children.length
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	879 - 1].radiusInner.current() * gRadius
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	880 : radiusInner
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	881 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	882
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	883 if (this == selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	884 this.drawReferenceRings(childRadiusInner);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	885 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	886
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	887 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	888 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	889 selected &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	890 !searchHighlighted &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	891 this != selectedNode &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	892 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	893 this.isSearchResult \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	894 this.hideAlone && this.searchResultChildren() \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	895 false
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	896 // this.hide &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	897 // this.containsSearchResult
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	898 )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	899 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	900 context.globalAlpha = this.alphaWedge.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	901
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	902 drawWedge
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	903 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	904 angleStartCurrent,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	905 angleEndCurrent,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	906 radiusInner,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	907 gRadius,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	908 highlightFill,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	909 0,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	910 true
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	911 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	912
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	913 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	914 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	915 this.keyed &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	916 !showKeys &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	917 this.searchResults &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	918 !searchHighlighted &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	919 this != highlightedNode &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	920 this != focusNode
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	921 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	922 var angle = (angleEndCurrent + angleStartCurrent) / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	923 this.drawLabel(angle, true, false, true, true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	924 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	925
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	926 //this.drawHighlight(false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	927 searchHighlighted = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	928 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	929
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	930 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	931 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	932 this == selectedNode \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	933 // true
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	934 //(canDisplayLabelCurrent) &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	935 this != highlightedNode &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	936 this != focusNode
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	937 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	938 if (this.radial != this.radialPrev
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	939 && this.alphaLabel.end == 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	940 context.globalAlpha = tweenFactor;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	941 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	942 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	943 context.globalAlpha = this.alphaLabel.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	944 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	945
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	946 this.drawLabel
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	947 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	948 (angleStartCurrent + angleEndCurrent) / 2,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	949 this.hideAlone && this.searchResultChildren() \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	950 (this.isSearchResult \|\| hiddenSearchResults) && selected,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	951 this == selectedNode && !this.radial,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	952 selected,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	953 this.radial
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	954 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	955
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	956 if (this.radial != this.radialPrev
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	957 && this.alphaLabel.start == 1 && progress < 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	958 context.globalAlpha = 1 - tweenFactor;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	959
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	960 this.drawLabel
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	961 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	962 (angleStartCurrent + angleEndCurrent) / 2,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	963 (this.isSearchResult \|\| hiddenSearchResults)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	964 && selected,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	965 this == selectedNodeLast && !this.radialPrev,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	966 selected,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	967 this.radialPrev
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	968 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	969 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	970 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	971
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	972 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	973 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	974 alphaOtherCurrent &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	975 lastChildAngleEnd != null
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	976 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	977 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	978 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	979 (angleEndCurrent - lastChildAngleEnd) *
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	980 (childRadiusInner + gRadius) >=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	981 minWidth()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	982 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	983 //context.font = fontNormal;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	984 context.globalAlpha = this.alphaOther.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	985
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	986 drawTextPolar
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	987 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	988 this.getUnclassifiedText(),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	989 this.getUnclassifiedPercentage(),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	990 (lastChildAngleEnd + angleEndCurrent) / 2,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	991 (childRadiusInner + gRadius) / 2,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	992 true,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	993 false,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	994 false,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	995 0,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	996 0
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	997 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	998 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	999 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1000
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1001 if (this == selectedNode && this.keyUnclassified && showKeys) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1002 this.drawKey
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1003 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1004 (lastChildAngleEnd + angleEndCurrent) / 2,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1005 false,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1006 false
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1007 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1008 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1009 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1010 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1011 var alphaWedgeCurrent = this.alphaWedge.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1012
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1013 if (alphaWedgeCurrent \|\| this.alphaOther.current()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1014 var currentR = this.r.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1015 var currentG = this.g.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1016 var currentB = this.b.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1017
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1018 var fill = rgbText(currentR, currentG, currentB);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1019
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1020 var radiusOuter;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1021 var lastChildAngle;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1022 var truncateWedge =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1023 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1024 (this.hasChildren() \|\| this == selectedNode) &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1025 !this.keyed &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1026 (compress \|\| depth < maxDisplayDepth) &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1027 drawChildren
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1028 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1029
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1030 if (truncateWedge) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1031 radiusOuter = this.children.length
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1032 ? this.children[0].radiusInner.current()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1033 * gRadius : radiusInner;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1034 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1035 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1036 radiusOuter = gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1037 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1038 /*
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1039 if ( this.hasChildren() )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1040 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1041 radiusOuter = this.children[0].getUncollapsed().radiusInner.current() * gRadius + 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1042 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1043 else
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1044 { // TEMP
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1045 radiusOuter = radiusInner + nodeRadius * gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1046
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1047 if ( radiusOuter > gRadius )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1048 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1049 radiusOuter = gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1050 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1051 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1052 */
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1053 context.globalAlpha = alphaWedgeCurrent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1054
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1055 if (radiusInner != radiusOuter \|\| truncateWedge) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1056 drawWedge
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1057 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1058 angleStartCurrent,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1059 angleEndCurrent,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1060 radiusInner,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1061 radiusOuter,//this.radiusOuter.current() * gRadius,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1062 //'rgba(0, 200, 0, .1)',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1063 fill,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1064 this.alphaPattern.current()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1065 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1066
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1067 if (truncateWedge) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1068 // fill in the extra space if the sum of our
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1069 // childrens' magnitudes is less than ours
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1070
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1071 if (lastChildAngleEnd < angleEndCurrent)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1072 //&& false) // TEMP
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1073 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1074 if (radiusOuter > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1075 // overlap slightly to hide the seam
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1076
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1077 // radiusOuter -= 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1078 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1079
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1080 if (alphaWedgeCurrent < 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1081 context.globalAlpha
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1082 = this.alphaOther.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1083 drawWedge
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1084 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1085 lastChildAngleEnd,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1086 angleEndCurrent,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1087 radiusOuter,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1088 gRadius,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1089 colorUnclassified,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1090 0
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1091 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1092 context.globalAlpha = alphaWedgeCurrent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1093 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1094
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1095 drawWedge
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1096 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1097 lastChildAngleEnd,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1098 angleEndCurrent,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1099 radiusOuter,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1100 gRadius,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1101 //this.radiusOuter.current() * gRadius,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1102 //'rgba(200, 0, 0, .1)',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1103 fill,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1104 this.alphaPattern.current()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1105 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1106 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1107 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1108
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1109 if (radiusOuter < gRadius) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1110 // patch up the seam
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1111 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1112 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1113 context.arc(0, 0, radiusOuter,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1114 angleStartCurrent/lastChildAngleEnd/,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1115 angleEndCurrent, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1116 context.strokeStyle = fill;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1117 context.lineWidth = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1118 context.stroke();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1119 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1120 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1121
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1122 if (this.keyed && selected && showKeys)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1123 //&& progress == 1 )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1124 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1125 this.drawKey
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1126 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1127 (angleStartCurrent + angleEndCurrent) / 2,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1128 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1129 this == highlightedNode \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1130 this == focusNode \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1131 this.searchResults
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1132 ),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1133 this == highlightedNode \|\| this == focusNode
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1134 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1135 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1136 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1137 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1138 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1139
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1140 this.hiddenLabels = Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1141
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1142 if (drawChildren) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1143 // draw children
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1144 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1145 for (var i = 0; i < this.children.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1146 if (this.drawHiddenChildren(i, selected, labelMode,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1147 searchHighlighted)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1148 var childHiddenEnd = this.children[i].hiddenEnd;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1149 if (childHiddenEnd > i) { // Avoid infinite loop
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1150 i = childHiddenEnd;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1151 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1152 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1153 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1154 this.children[i].draw(labelMode, selected,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1155 searchHighlighted);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1156 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1157 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1158 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1159 };
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1160
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1161 this.drawHiddenChildren = function
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1162 (firstHiddenChild,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1163 selected,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1164 labelMode,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1165 searchHighlighted) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1166 var firstChild = this.children[firstHiddenChild];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1167
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1168 if (firstChild.hiddenEnd == null
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1169 \|\| firstChild.radiusInner.current() == 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1170 return false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1171 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1172
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1173 for (var i = firstHiddenChild; i < firstChild.hiddenEnd; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1174 if (!this.children[i].hide
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1175 \|\| !this.children[i].hidePrev && progress < 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1176 return false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1177 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1178 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1179
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1180 var angleStart = firstChild.angleStart.current() + rotationOffset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1181 var lastChild = this.children[firstChild.hiddenEnd];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1182 var angleEnd = lastChild.angleEnd.current() + rotationOffset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1183 var radiusInner = gRadius * firstChild.radiusInner.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1184 var hiddenChildren = firstChild.hiddenEnd - firstHiddenChild + 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1185
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1186 if (labelMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1187 var hiddenSearchResults = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1188
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1189 for (var i = firstHiddenChild; i <= firstChild.hiddenEnd; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1190 hiddenSearchResults += this.children[i].searchResults;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1191
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1192 if (this.children[i].magnitude == 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1193 hiddenChildren--;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1194 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1195 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1196
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1197 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1198 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1199 selected &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1200 (angleEnd - angleStart) *
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1201 (gRadius + gRadius) >=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1202 minWidth() \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1203 this == highlightedNode &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1204 hiddenChildren \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1205 hiddenSearchResults
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1206 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1207 context.globalAlpha = this.alphaWedge.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1208
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1209 this.drawHiddenLabel
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1210 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1211 angleStart,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1212 angleEnd,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1213 hiddenChildren,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1214 hiddenSearchResults
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1215 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1216 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1217 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1218
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1219 var drawWedges = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1220
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1221 for (var i = firstHiddenChild; i <= firstChild.hiddenEnd; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1222 // all hidden children must be completely hidden to draw together
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1223
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1224 if (this.children[i].alphaPattern.current()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1225 != this.children[i].alphaWedge.current()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1226 drawWedges = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1227 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1228 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1229 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1230
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1231 if (labelMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1232 if (drawWedges) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1233 var drawRadial = (angleEnd
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1234 < this.angleEnd.current() + rotationOffset);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1235 this.drawLines(angleStart, angleEnd, radiusInner, drawRadial);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1236 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1237
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1238 if (hiddenSearchResults && !searchHighlighted) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1239 drawWedge
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1240 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1241 angleStart,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1242 angleEnd,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1243 radiusInner,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1244 gRadius,//this.radiusOuter.current() * gRadius,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1245 highlightFill,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1246 0,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1247 true
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1248 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1249 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1250 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1251 else if (drawWedges) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1252 context.globalAlpha = this.alphaWedge.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1253
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1254 var fill = rgbText
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1255 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1256 firstChild.r.current(),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1257 firstChild.g.current(),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1258 firstChild.b.current()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1259 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1260
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1261 drawWedge
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1262 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1263 angleStart,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1264 angleEnd,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1265 radiusInner,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1266 gRadius,//this.radiusOuter.current() * gRadius,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1267 fill,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1268 context.globalAlpha,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1269 false
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1270 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1271 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1272
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1273 return drawWedges;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1274 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1275
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1276 this.drawHiddenLabel = function (angleStart, angleEnd, value,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1277 hiddenSearchResults) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1278 var textAngle = (angleStart + angleEnd) / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1279 var labelRadius = gRadius + fontSize;//(radiusInner + radius) / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1280
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1281 var hiddenLabel = Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1282
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1283 hiddenLabel.value = value;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1284 hiddenLabel.angle = textAngle;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1285 hiddenLabel.search = hiddenSearchResults;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1286
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1287 this.hiddenLabels.push(hiddenLabel);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1288
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1289 drawTick(gRadius - fontSize * .75, fontSize * 1.5, textAngle);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1290 drawTextPolar
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1291 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1292 value.toString() + ' more',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1293 0, // inner text
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1294 textAngle,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1295 labelRadius,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1296 true, // radial
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1297 hiddenSearchResults, // bubble
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1298 this == highlightedNode \|\| this == focusNode, // bold
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1299 false,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1300 hiddenSearchResults
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1301 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1302 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1303
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1304 this.drawHighlight = function (bold) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1305 var angleStartCurrent = this.angleStart.current() + rotationOffset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1306 var angleEndCurrent = this.angleEnd.current() + rotationOffset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1307 var radiusInner = this.radiusInner.current() * gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1308
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1309 //this.setHighlightStyle();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1310
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1311 if (this == focusNode && this
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1312 == highlightedNode && this.hasChildren()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1313 // context.fillStyle = "rgba(255, 255, 255, .3)";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1314 arrow
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1315 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1316 angleStartCurrent,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1317 angleEndCurrent,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1318 radiusInner
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1319 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1320 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1321 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1322 drawWedge
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1323 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1324 angleStartCurrent,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1325 angleEndCurrent,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1326 radiusInner,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1327 gRadius,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1328 highlightFill,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1329 0,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1330 true
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1331 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1332 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1333
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1334 // check if hidden children should be highlighted
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1335 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1336 for (var i = 0; i < this.children.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1337 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1338 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1339 this.children[i].getDepth() - selectedNode.getDepth() + 1 <=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1340 maxDisplayDepth &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1341 this.children[i].hiddenEnd != null
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1342 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1343 var firstChild = this.children[i];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1344 var lastChild = this.children[firstChild.hiddenEnd];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1345 var hiddenAngleStart = firstChild.angleStart.current()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1346 + rotationOffset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1347 var hiddenAngleEnd = lastChild.angleEnd.current()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1348 + rotationOffset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1349 var hiddenRadiusInner = gRadius
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1350 * firstChild.radiusInner.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1351
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1352 drawWedge
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1353 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1354 hiddenAngleStart,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1355 hiddenAngleEnd,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1356 hiddenRadiusInner,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1357 gRadius,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1358 'rgba(255, 255, 255, .3)',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1359 0,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1360 true
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1361 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1362
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1363 if (false && !this.searchResults) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1364 this.drawHiddenLabel
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1365 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1366 hiddenAngleStart,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1367 hiddenAngleEnd,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1368 firstChild.hiddenEnd - i + 1
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1369 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1370 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1371
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1372 i = firstChild.hiddenEnd;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1373 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1374 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1375
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1376 // context.strokeStyle = 'black';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1377 context.fillStyle = 'black';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1378
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1379 var highlight = !(progress < 1 && zoomOut
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1380 && this == selectedNodeLast);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1381
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1382 var angle = (angleEndCurrent + angleStartCurrent) / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1383
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1384 if (!(this.keyed && showKeys)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1385 this.drawLabel(angle, true, bold, true, this.radial);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1386 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1387 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1388
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1389 this.drawHighlightCenter = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1390 if (!this.canDisplayHistory()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1391 return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1392 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1393
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1394 context.lineWidth = highlightLineWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1395 context.strokeStyle = 'black';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1396 context.fillStyle = "rgba(255, 255, 255, .6)";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1397
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1398 context.fillStyle = 'black';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1399 this.drawLabel(3 * Math.PI / 2, true, true, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1400 context.font = fontNormal;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1401 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1402
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1403 this.drawKey = function (angle, highlight, bold) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1404 var offset = keyOffset();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1405 var color;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1406 var colorText = this.magnitude == 0 ? 'gray' : 'black';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1407 var patternAlpha = this.alphaPattern.end;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1408 var boxLeft = imageWidth - keySize - margin;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1409 var textY = offset + keySize / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1410
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1411 var label;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1412 var keyNameWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1413
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1414 if (this == selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1415 color = colorUnclassified;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1416 label =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1417 this.getUnclassifiedText() +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1418 ' ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1419 this.getUnclassifiedPercentage();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1420 keyNameWidth = measureText(label, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1421 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1422 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1423 label = this.keyLabel;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1424 color = rgbText(this.r.end, this.g.end, this.b.end);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1425
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1426 if (highlight) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1427 if (this.searchResultChildren()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1428 label = label
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1429 + searchResultString(this.searchResultChildren());
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1430 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1431
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1432 keyNameWidth = measureText(label, bold);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1433 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1434 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1435 keyNameWidth = this.keyNameWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1436 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1437 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1438
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1439 var textLeft = boxLeft - keyBuffer - keyNameWidth - fontSize / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1440 var labelLeft = textLeft;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1441
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1442 if (labelLeft > keyMinTextLeft - fontSize / 2) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1443 keyMinTextLeft -= fontSize / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1444
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1445 if (keyMinTextLeft < centerX - gRadius + fontSize / 2) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1446 keyMinTextLeft = centerX - gRadius + fontSize / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1447 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1448
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1449 labelLeft = keyMinTextLeft;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1450 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1451
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1452 var lineX = new Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1453 var lineY = new Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1454
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1455 var bendRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1456 var keyAngle = Math.atan((textY - centerY) / (labelLeft - centerX));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1457 var arcAngle;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1458
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1459 if (keyAngle < 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1460 keyAngle += Math.PI;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1461 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1462
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1463 if (keyMinAngle == 0 \|\| angle < keyMinAngle) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1464 keyMinAngle = angle;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1465 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1466
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1467 if (angle > Math.PI && keyMinAngle > Math.PI) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1468 // allow lines to come underneath the chart
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1469
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1470 angle -= Math.PI * 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1471 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1472
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1473 lineX.push(Math.cos(angle) * gRadius);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1474 lineY.push(Math.sin(angle) * gRadius);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1475
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1476 if (angle < keyAngle
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1477 && textY > centerY
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1478 + Math.sin(angle) * (gRadius + buffer * (currentKey - 1)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1479 / (keys + 1) / 2 + buffer / 2)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1480 bendRadius = gRadius + buffer - buffer * currentKey
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1481 / (keys + 1) / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1482 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1483 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1484 bendRadius = gRadius + buffer * currentKey
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1485 / (keys + 1) / 2 + buffer / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1486 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1487
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1488 var outside =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1489 Math.sqrt
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1490 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1491 Math.pow(labelLeft - centerX, 2) +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1492 Math.pow(textY - centerY, 2)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1493 ) > bendRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1494
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1495 if (!outside) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1496 arcAngle = Math.asin((textY - centerY) / bendRadius);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1497
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1498 keyMinTextLeft = min(keyMinTextLeft, centerX
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1499 + bendRadius * Math.cos(arcAngle) - fontSize / 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1500
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1501 if (labelLeft < textLeft && textLeft > centerX
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1502 + bendRadius * Math.cos(arcAngle)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1503 lineX.push(textLeft - centerX);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1504 lineY.push(textY - centerY);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1505 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1506 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1507 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1508 keyMinTextLeft = min(keyMinTextLeft, labelLeft - fontSize / 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1509
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1510 if (angle < keyAngle) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1511 // flip everything over y = x
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1512 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1513 arcAngle = Math.PI / 2 - keyLineAngle
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1514 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1515 Math.PI / 2 - angle,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1516 Math.PI / 2 - keyAngle,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1517 bendRadius,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1518 textY - centerY,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1519 labelLeft - centerX,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1520 lineY,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1521 lineX
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1522 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1523
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1524 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1525 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1526 arcAngle = keyLineAngle
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1527 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1528 angle,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1529 keyAngle,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1530 bendRadius,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1531 labelLeft - centerX,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1532 textY - centerY,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1533 lineX,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1534 lineY
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1535 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1536 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1537 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1538
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1539 if (labelLeft > centerX + bendRadius * Math.cos(arcAngle) \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1540 textY > centerY + bendRadius * Math.sin(arcAngle) + .01)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1541 // if ( outside \|\| )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1542 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1543 lineX.push(labelLeft - centerX);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1544 lineY.push(textY - centerY);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1545
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1546 if (textLeft != labelLeft) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1547 lineX.push(textLeft - centerX);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1548 lineY.push(textY - centerY);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1549 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1550 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1551
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1552 context.globalAlpha = this.alphaWedge.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1553
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1554 if (snapshotMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1555 var labelSVG;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1556
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1557 if (this == selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1558 labelSVG =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1559 this.getUnclassifiedText() +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1560 spacer() +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1561 this.getUnclassifiedPercentage();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1562 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1563 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1564 labelSVG = this.name + spacer() + this.getPercentage() + '%';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1565 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1566
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1567 svg +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1568 '<rect fill="' + color + '" ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1569 'x="' + boxLeft + '" y="' + offset +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1570 '" width="' + keySize + '" height="' + keySize + '"/>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1571
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1572 if (patternAlpha) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1573 svg +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1574 '<rect fill="url(#hiddenPattern)" style="stroke:none" ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1575 'x="' + boxLeft + '" y="' + offset +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1576 '" width="' + keySize + '" height="' + keySize + '"/>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1577 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1578
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1579 svg +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1580 '<path class="line' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1581 (highlight ? ' highlight' : '') +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1582 '" d="M ' + (lineX[0] + centerX) + ',' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1583 (lineY[0] + centerY);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1584
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1585 if (angle != arcAngle) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1586 svg +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1587 ' L ' + (centerX + bendRadius * Math.cos(angle)) + ',' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1588 (centerY + bendRadius * Math.sin(angle)) +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1589 ' A ' + bendRadius + ',' + bendRadius + ' 0 ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1590 '0,' + (angle > arcAngle ? '0' : '1') + ' ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1591 (centerX + bendRadius * Math.cos(arcAngle)) + ',' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1592 (centerY + bendRadius * Math.sin(arcAngle));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1593 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1594
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1595 for (var i = 1; i < lineX.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1596 svg +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1597 ' L ' + (centerX + lineX[i]) + ',' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1598 (centerY + lineY[i]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1599 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1600
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1601 svg += '"/>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1602
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1603 if (highlight) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1604 if (this.searchResultChildren()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1605 labelSVG = labelSVG
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1606 + searchResultString(this.searchResultChildren());
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1607 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1608
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1609 drawBubbleSVG
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1610 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1611 boxLeft - keyBuffer - keyNameWidth - fontSize / 2,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1612 textY - fontSize,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1613 keyNameWidth + fontSize,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1614 fontSize * 2,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1615 fontSize,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1616 0
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1617 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1618
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1619 if (this.isSearchResult) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1620 drawSearchHighlights
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1621 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1622 label,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1623 boxLeft - keyBuffer - keyNameWidth,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1624 textY,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1625 0
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1626 )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1627 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1628 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1629
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1630 svg += svgText(labelSVG, boxLeft - keyBuffer, textY, 'end', bold,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1631 colorText);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1632 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1633 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1634 context.fillStyle = color;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1635 context.translate(-centerX, -centerY);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1636 context.strokeStyle = 'black';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1637 context.globalAlpha = 1;//this.alphaWedge.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1638
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1639 context.fillRect(boxLeft, offset, keySize, keySize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1640
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1641 if (patternAlpha) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1642 context.globalAlpha = patternAlpha;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1643 context.fillStyle = hiddenPattern;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1644
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1645 // make clipping box for Firefox performance
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1646 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1647 context.moveTo(boxLeft, offset);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1648 context.lineTo(boxLeft + keySize, offset);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1649 context.lineTo(boxLeft + keySize, offset + keySize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1650 context.lineTo(boxLeft, offset + keySize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1651 context.closePath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1652 context.save();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1653 context.clip();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1654
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1655 context.fillRect(boxLeft, offset, keySize, keySize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1656 context.fillRect(boxLeft, offset, keySize, keySize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1657
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1658 context.restore(); // remove clipping region
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1659 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1660
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1661 if (highlight) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1662 this.setHighlightStyle();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1663 context.fillRect(boxLeft, offset, keySize, keySize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1664 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1665 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1666 context.lineWidth = thinLineWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1667 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1668
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1669 context.strokeRect(boxLeft, offset, keySize, keySize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1670
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1671 if (lineX.length) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1672 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1673 context.moveTo(lineX[0] + centerX, lineY[0] + centerY);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1674
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1675 context.arc(centerX, centerY, bendRadius, angle, arcAngle,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1676 angle > arcAngle);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1677
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1678 for (var i = 1; i < lineX.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1679 context.lineTo(lineX[i] + centerX, lineY[i] + centerY);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1680 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1681
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1682 context.globalAlpha = this == selectedNode ?
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1683 this.children[0].alphaWedge.current() :
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1684 this.alphaWedge.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1685 context.lineWidth = highlight
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1686 ? highlightLineWidth : thinLineWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1687 context.stroke();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1688 context.globalAlpha = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1689 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1690
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1691 if (highlight) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1692 drawBubbleCanvas
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1693 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1694 boxLeft - keyBuffer - keyNameWidth - fontSize / 2,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1695 textY - fontSize,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1696 keyNameWidth + fontSize,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1697 fontSize * 2,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1698 fontSize,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1699 0
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1700 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1701
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1702 if (this.isSearchResult) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1703 drawSearchHighlights
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1704 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1705 label,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1706 boxLeft - keyBuffer - keyNameWidth,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1707 textY,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1708 0
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1709 )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1710 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1711 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1712
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1713 drawText(label, boxLeft - keyBuffer, offset + keySize / 2, 0,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1714 'end', bold, colorText);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1715
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1716 context.translate(centerX, centerY);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1717 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1718
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1719 currentKey++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1720 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1721
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1722 this.drawLabel = function (angle, bubble, bold, selected, radial) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1723 if (context.globalAlpha == 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1724 return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1725 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1726
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1727 var innerText;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1728 var label;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1729 var radius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1730
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1731 if (radial) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1732 radius = (this.radiusInner.current() + 1) * gRadius / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1733 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1734 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1735 radius = this.labelRadius.current() * gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1736 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1737
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1738 if (radial && (selected \|\| bubble)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1739 var percentage = this.getPercentage();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1740 innerText = percentage + '%';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1741 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1742
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1743 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1744 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1745 !radial &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1746 this != selectedNode &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1747 !bubble &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1748 (!zoomOut \|\| this != selectedNodeLast)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1749 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1750 label = this.shortenLabel();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1751 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1752 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1753 label = this.name;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1754 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1755
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1756 var flipped = drawTextPolar
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1757 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1758 label,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1759 innerText,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1760 angle,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1761 radius,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1762 radial,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1763 bubble,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1764 bold,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1765 // this.isSearchResult && this.shouldAddSearchResultsString() && (!selected \|\| this == selectedNode \|\| highlight),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1766 this.isSearchResult
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1767 && (!selected \|\| this == selectedNode \|\| bubble),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1768 (this.hideAlone \|\| !selected \|\| this == selectedNode)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1769 ? this.searchResultChildren() : 0
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1770 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1771
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1772 var depth = this.getDepth() - selectedNode.getDepth() + 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1773
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1774 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1775 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1776 !radial &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1777 !bubble &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1778 this != selectedNode &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1779 this.angleEnd.end != this.angleStart.end &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1780 nLabelOffsets[depth - 2] > 2 &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1781 this.labelWidth.current()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1782 > (this.angleEnd.end - this.angleStart.end) * Math.abs(radius) &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1783 !(zoomOut && this == selectedNodeLast) &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1784 this.labelRadius.end > 0
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1785 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1786 // name extends beyond wedge; draw tick mark towards the central
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1787 // radius for easier identification
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1788
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1789 var radiusCenter = compress ?
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1790 (compressedRadii[depth - 1] + compressedRadii[depth - 2]) / 2 :
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1791 (depth - .5) * nodeRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1792
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1793 if (this.labelRadius.end > radiusCenter) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1794 if (flipped) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1795 drawTick(radius - tickLength * 1.4, tickLength, angle);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1796 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1797 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1798 drawTick(radius - tickLength * 1.7, tickLength, angle);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1799 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1800 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1801 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1802 if (flipped) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1803 drawTick(radius + tickLength * .7, tickLength, angle);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1804 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1805 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1806 drawTick(radius + tickLength * .4, tickLength, angle);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1807 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1808 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1809 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1810 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1811
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1812 this.drawLines = function (angleStart, angleEnd, radiusInner, drawRadial,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1813 selected) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1814 if (snapshotMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1815 if (this != selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1816 if (angleEnd == angleStart + Math.PI * 2) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1817 // fudge to prevent overlap, which causes arc ambiguity
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1818 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1819 angleEnd -= .1 / gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1820 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1821
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1822 var longArc = angleEnd - angleStart > Math.PI ? 1 : 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1823
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1824 var x1 = centerX + radiusInner * Math.cos(angleStart);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1825 var y1 = centerY + radiusInner * Math.sin(angleStart);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1826
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1827 var x2 = centerX + gRadius * Math.cos(angleStart);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1828 var y2 = centerY + gRadius * Math.sin(angleStart);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1829
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1830 var x3 = centerX + gRadius * Math.cos(angleEnd);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1831 var y3 = centerY + gRadius * Math.sin(angleEnd);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1832
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1833 var x4 = centerX + radiusInner * Math.cos(angleEnd);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1834 var y4 = centerY + radiusInner * Math.sin(angleEnd);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1835
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1836 if (this.alphaArc.end) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1837 var dArray =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1838 [
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1839 " M ", x4, ",", y4,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1840 " A ", radiusInner, ",", radiusInner, " 0 ",
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1841 longArc,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1842 " 0 ", x1, ",", y1
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1843 ];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1844
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1845 svg += '<path class="line" d="' + dArray.join('') + '"/>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1846 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1847
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1848 if (drawRadial && this.alphaLine.end) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1849 svg += '<line x1="' + x3 + '" y1="' + y3 + '" x2="' + x4
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1850 + '" y2="' + y4 + '"/>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1851 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1852 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1853 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1854 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1855 context.lineWidth = thinLineWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1856 context.strokeStyle = 'black';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1857 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1858 context.arc(0, 0, radiusInner, angleStart, angleEnd, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1859 context.globalAlpha = this.alphaArc.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1860 context.stroke();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1861
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1862 if (drawRadial) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1863 var x1 = radiusInner * Math.cos(angleEnd);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1864 var y1 = radiusInner * Math.sin(angleEnd);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1865 var x2 = gRadius * Math.cos(angleEnd);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1866 var y2 = gRadius * Math.sin(angleEnd);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1867
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1868 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1869 context.moveTo(x1, y1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1870 context.lineTo(x2, y2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1871
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1872 // if ( this.getCollapse() )//( selected && this != selectedNode )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1873 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1874 context.globalAlpha = this.alphaLine.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1875 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1876
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1877 context.stroke();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1878 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1879 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1880 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1881
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1882 this.drawMap = function (child) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1883 if (this.parent) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1884 this.parent.drawMap(child);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1885 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1886
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1887 if (this.getCollapse() && this != child \|\| this == focusNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1888 return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1889 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1890
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1891 var angleStart =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1892 (child.baseMagnitude - this.baseMagnitude) / this.magnitude
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1893 * Math.PI * 2 + rotationOffset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1894 var angleEnd =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1895 (child.baseMagnitude - this.baseMagnitude + child.magnitude) /
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1896 this.magnitude * Math.PI * 2 +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1897 rotationOffset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1898
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1899 var box = this.getMapPosition();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1900
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1901 context.save();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1902 context.fillStyle = 'black';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1903 context.textAlign = 'end';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1904 context.textBaseline = 'middle';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1905
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1906 var textX = box.x - mapRadius - mapBuffer;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1907 var percentage = getPercentage(child.magnitude / this.magnitude);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1908
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1909 var highlight = this == selectedNode \|\| this == highlightedNode;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1910
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1911 if (highlight) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1912 context.font = fontBold;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1913 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1914 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1915 context.font = fontNormal;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1916 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1917
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1918 context.fillText(percentage + '% of', textX, box.y - mapRadius / 3);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1919 context.fillText(this.name, textX, box.y + mapRadius / 3);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1920
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1921 if (highlight) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1922 context.font = fontNormal;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1923 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1924
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1925 if (this == highlightedNode && this != selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1926 context.fillStyle = 'rgb(245, 245, 245)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1927 // context.fillStyle = 'rgb(200, 200, 200)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1928 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1929 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1930 context.fillStyle = 'rgb(255, 255, 255)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1931 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1932
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1933 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1934 context.arc(box.x, box.y, mapRadius, 0, Math.PI * 2, true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1935 context.closePath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1936 context.fill();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1937
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1938 if (this == selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1939 context.lineWidth = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1940 context.fillStyle = 'rgb(100, 100, 100)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1941 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1942 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1943 if (this == highlightedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1944 context.lineWidth = .2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1945 context.fillStyle = 'rgb(190, 190, 190)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1946 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1947 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1948 context.lineWidth = .2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1949 context.fillStyle = 'rgb(200, 200, 200)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1950 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1951 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1952
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1953 var maxDepth = this.getMaxDepth();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1954
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1955 if (!compress && maxDepth > maxPossibleDepth + this.getDepth() - 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1956 maxDepth = maxPossibleDepth + this.getDepth() - 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1957 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1958
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1959 if (this.getDepth() < selectedNode.getDepth()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1960 if (child.getDepth() - 1 >= maxDepth) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1961 maxDepth = child.getDepth();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1962 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1963 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1964
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1965 var radiusInner;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1966
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1967 if (compress) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1968 radiusInner = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1969 // Math.atan(child.getDepth() - this.getDepth()) /
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1970 // Math.PI * 2 * .9;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1971 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1972 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1973 radiusInner =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1974 (child.getDepth() - this.getDepth()) /
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1975 (maxDepth - this.getDepth() + 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1976 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1977
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1978 context.stroke();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1979 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1980
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1981 if (radiusInner == 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1982 context.moveTo(box.x, box.y);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1983 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1984 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1985 context.arc(box.x, box.y, mapRadius * radiusInner, angleEnd,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1986 angleStart, true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1987 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1988
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1989 context.arc(box.x, box.y, mapRadius, angleStart, angleEnd, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1990 context.closePath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1991 context.fill();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1992
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1993 if (this == highlightedNode && this != selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1994 context.lineWidth = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1995 context.stroke();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1996 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1997
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1998 context.restore();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	1999 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2000
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2001 this.drawReferenceRings = function (childRadiusInner) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2002 if (snapshotMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2003 svg +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2004 '<circle cx="' + centerX + '" cy="' + centerY +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2005 '" r="' + childRadiusInner + '"/>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2006 svg +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2007 '<circle cx="' + centerX + '" cy="' + centerY +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2008 '" r="' + gRadius + '"/>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2009 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2010 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2011 context.globalAlpha = 1 - this.alphaLine.current();//this.getUncollapsed().alphaLine.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2012 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2013 context.arc(0, 0, childRadiusInner, 0, Math.PI * 2, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2014 context.stroke();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2015 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2016 context.arc(0, 0, gRadius, 0, Math.PI * 2, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2017 context.stroke();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2018 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2019 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2020
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2021 this.getCollapse = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2022 return (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2023 collapse &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2024 this.collapse &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2025 this.depth != maxAbsoluteDepth
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2026 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2027 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2028
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2029 this.getDepth = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2030 if (collapse) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2031 return this.depthCollapsed;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2032 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2033 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2034 return this.depth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2035 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2036 };
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2037
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2038 this.getHue = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2039 return this.hues[currentDataset];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2040 };
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2041
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2042 this.getMagnitude = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2043 return this.attributes[magnitudeIndex][currentDataset];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2044 };
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2045
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2046 this.getMapPosition = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2047 return {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2048 x: (details.offsetLeft + details.clientWidth - mapRadius),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2049 y: ((focusNode.getDepth() - this.getDepth()) *
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2050 (mapBuffer + mapRadius * 2) - mapRadius) +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2051 details.clientHeight + details.offsetTop
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2052 };
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2053 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2054
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2055 this.getMaxDepth = function (limit) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2056 var max;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2057
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2058 if (collapse) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2059 return this.maxDepthCollapsed;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2060 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2061 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2062 if (this.maxDepth > maxAbsoluteDepth) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2063 return maxAbsoluteDepth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2064 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2065 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2066 return this.maxDepth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2067 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2068 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2069 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2070
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2071 this.getData = function (index, summary) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2072 var files = new Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2073
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2074 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2075 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2076 this.attributes[index] != null &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2077 this.attributes[index][currentDataset] != null &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2078 this.attributes[index][currentDataset] != ''
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2079 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2080 files.push
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2081 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2082 document.location +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2083 '.files/' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2084 this.attributes[index][currentDataset]
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2085 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2086 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2087
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2088 if (summary) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2089 for (var i = 0; i < this.children.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2090 files = files.concat(this.children[i].getData(index, true));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2091 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2092 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2093
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2094 return files;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2095 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2096
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2097 this.getList = function (index, summary) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2098 var list;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2099
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2100 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2101 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2102 this.attributes[index] != null &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2103 this.attributes[index][currentDataset] != null
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2104 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2105 list = this.attributes[index][currentDataset];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2106 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2107 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2108 list = new Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2109 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2110
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2111 if (summary) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2112 for (var i = 0; i < this.children.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2113 list = list.concat(this.children[i].getList(index, true));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2114 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2115 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2116
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2117 return list;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2118 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2119
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2120 this.getParent = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2121 // returns parent, accounting for collapsing or 0 if doesn't exist
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2122
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2123 var parent = this.parent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2124
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2125 while (parent != 0 && parent.getCollapse()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2126 parent = parent.parent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2127 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2128
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2129 return parent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2130 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2131
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2132 this.getPercentage = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2133 return getPercentage(this.magnitude / selectedNode.magnitude);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2134 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2135
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2136 this.getUnclassifiedPercentage = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2137 if (this.children.length) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2138 var lastChild = this.children[this.children.length - 1];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2139
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2140 return getPercentage
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2141 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2142 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2143 this.baseMagnitude +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2144 this.magnitude -
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2145 lastChild.magnitude -
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2146 lastChild.baseMagnitude
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2147 ) / this.magnitude
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2148 ) + '%';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2149 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2150 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2151 return '100%';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2152 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2153 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2154
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2155 this.getUnclassifiedText = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2156 return '[other ' + this.name + ']';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2157 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2158
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2159 this.getUncollapsed = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2160 // recurse through collapsed children until uncollapsed node is found
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2161
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2162 if (this.getCollapse()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2163 return this.children[0].getUncollapsed();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2164 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2165 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2166 return this;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2167 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2168 };
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2169
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2170 this.hasChildren = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2171 return this.depth < maxAbsoluteDepth && this.magnitude
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2172 && this.children.length;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2173 };
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2174
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2175 this.hasParent = function (parent) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2176 if (this.parent) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2177 if (this.parent === parent) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2178 return true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2179 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2180 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2181 return this.parent.hasParent(parent);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2182 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2183 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2184 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2185 return false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2186 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2187 };
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2188
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2189 this.isLeaf = function (_recursing) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2190 // Returns true/1 for a real leave, false/0 otherwise, counting the
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2191 // non-empty leaves downstream and checking for positive counts.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2192 // Param _recursing is an internal auxiliar variable not to be used
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2193 var leaves = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2194 if (this.children.length) { // Node has children -> recurse
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2195 for (var i = 0; i < this.children.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2196 leaves += this.children[i].isLeaf(true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2197 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2198 if (_recursing) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2199 return leaves ? leaves : +!!this.magnitude;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2200 // If this has no leaves but has magnitude, this is a leaf.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2201 // NOTE: +!!num is 0 for num=0 and is 1 otherwise
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2202 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2203 return !!this.magnitude && !leaves;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2204 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2205 } else { // Node has not children
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2206 if (!this.magnitude) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2207 return 0; // Fake leaf (empty)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2208 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2209 return 1; // This is true leaf
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2210 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2211 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2212 };
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2213
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2214 this.maxVisibleDepth = function (maxDepth) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2215 var childInnerRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2216 var depth = this.getDepth() - selectedNode.getDepth() + 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2217 var currentMaxDepth = depth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2218
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2219 if (this.hasChildren() && depth < maxDepth) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2220 var lastChild = this.children[this.children.length - 1];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2221
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2222 if (lastChild.baseMagnitude + lastChild.magnitude <
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2223 this.baseMagnitude + this.magnitude) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2224 currentMaxDepth++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2225 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2226
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2227 if (compress) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2228 childInnerRadius = compressedRadii[depth - 1];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2229 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2230 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2231 childInnerRadius = (depth) / maxDepth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2232 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2233
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2234 for (var i = 0; i < this.children.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2235 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2236 (//true \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2237 this.children[i].magnitude *
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2238 angleFactor *
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2239 (childInnerRadius + 1) *
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2240 gRadius >=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2241 minWidth()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2242 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2243 var childMaxDepth
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2244 = this.children[i].maxVisibleDepth(maxDepth);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2245
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2246 if (childMaxDepth > currentMaxDepth) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2247 currentMaxDepth = childMaxDepth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2248 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2249 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2250 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2251 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2252
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2253 return currentMaxDepth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2254 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2255
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2256 this.resetLabelWidth = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2257 var nameWidthOld = this.nameWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2258
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2259 if (true \|\| !this.radial)//&& fontSize != fontSizeLast )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2260 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2261 var dim = context.measureText(this.name);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2262 this.nameWidth = dim.width;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2263 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2264
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2265 if (fontSize != fontSizeLast
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2266 && this.labelWidth.end == nameWidthOld * labelWidthFudge) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2267 // font size changed; adjust start of tween to match
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2268
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2269 this.labelWidth.start = this.nameWidth * labelWidthFudge;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2270 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2271 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2272 this.labelWidth.start = this.labelWidth.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2273 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2274
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2275 this.labelWidth.end = this.nameWidth * labelWidthFudge;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2276 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2277
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2278 this.restrictLabelWidth = function (width) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2279 if (width < this.labelWidth.end) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2280 this.labelWidth.end = width;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2281 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2282 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2283
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2284 this.search = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2285 this.isSearchResult = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2286 this.searchResults = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2287
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2288 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2289 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2290 !this.getCollapse() &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2291 search.value !== '' &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2292 this.name.toLowerCase().indexOf(search.value.toLowerCase()) !== -1
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2293 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2294 this.isSearchResult = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2295 this.searchResults = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2296 nSearchResults++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2297 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2298
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2299 for (var i = 0; i < this.children.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2300 this.searchResults += this.children[i].search();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2301 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2302
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2303 return this.searchResults;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2304 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2305
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2306 this.searchResultChildren = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2307 if (this.isSearchResult) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2308 return this.searchResults - 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2309 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2310 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2311 return this.searchResults;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2312 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2313 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2314
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2315 this.setDepth = function (depth, depthCollapsed) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2316 this.depth = depth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2317 this.depthCollapsed = depthCollapsed;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2318
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2319 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2320 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2321 this.children.length === 1 &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2322 // this.magnitude > 0 &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2323 this.children[0].magnitude === this.magnitude &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2324 (head.children.length > 1 \|\| this.children[0].children.length)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2325 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2326 this.collapse = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2327 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2328 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2329 this.collapse = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2330 depthCollapsed++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2331 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2332
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2333 for (var i = 0; i < this.children.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2334 this.children[i].setDepth(depth + 1, depthCollapsed);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2335 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2336 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2337
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2338 this.setHighlightStyle = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2339 context.lineWidth = highlightLineWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2340
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2341 if (this.hasChildren() \|\| this !== focusNode
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2342 \|\| this !== highlightedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2343 context.strokeStyle = 'black';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2344 context.fillStyle = "rgba(255, 255, 255, .3)";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2345 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2346 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2347 context.strokeStyle = 'rgb(90,90,90)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2348 context.fillStyle = "rgba(155, 155, 155, .3)";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2349 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2350 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2351
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2352 this.setLabelWidth = function (node) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2353 if (!shorten \|\| this.radial) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2354 return; // don't need to set width
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2355 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2356
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2357 if (node.hide) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2358 alert('wtf');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2359 return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2360 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2361
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2362 var angle = (this.angleStart.end + this.angleEnd.end) / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2363 var a; // angle difference
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2364
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2365 if (node == selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2366 a = Math.abs(angle - node.angleOther);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2367 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2368 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2369 a = Math.abs(angle
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2370 - (node.angleStart.end + node.angleEnd.end) / 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2371 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2372
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2373 if (a == 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2374 return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2375 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2376
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2377 if (a > Math.PI) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2378 a = 2 * Math.PI - a;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2379 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2380
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2381 if (node.radial \|\| node == selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2382 var nodeLabelRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2383
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2384 if (node == selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2385 // radial 'other' label
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2386
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2387 nodeLabelRadius = (node.children[0].radiusInner.end + 1) / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2388 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2389 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2390 nodeLabelRadius = (node.radiusInner.end + 1) / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2391 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2392
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2393 if (a < Math.PI / 2) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2394 var r = this.labelRadius.end * gRadius + .5 * fontSize
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2395 var hypotenuse = r / Math.cos(a);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2396 var opposite = r * Math.tan(a);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2397 var fontRadius = .8 * fontSize;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2398
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2399 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2400 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2401 nodeLabelRadius * gRadius < hypotenuse &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2402 this.labelWidth.end / 2 + fontRadius > opposite
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2403 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2404 this.labelWidth.end = 2 * (opposite - fontRadius);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2405 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2406 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2407 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2408 else if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2409 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2410 this.labelRadius.end == node.labelRadius.end &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2411 a < Math.PI / 4
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2412 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2413 // same radius with small angle; use circumferential approximation
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2414
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2415 var dist = a * this.labelRadius.end * gRadius - fontSize
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2416 * (1 - a * 4 / Math.PI) * 1.3;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2417
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2418 if (this.labelWidth.end < dist) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2419 node.restrictLabelWidth((dist - this.labelWidth.end / 2) * 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2420 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2421 else if (node.labelWidth.end < dist) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2422 this.restrictLabelWidth((dist - node.labelWidth.end / 2) * 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2423 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2424 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2425 // both labels reach halfway point; restrict both
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2426
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2427 this.labelWidth.end = dist;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2428 node.labelWidth.end = dist
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2429 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2430 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2431 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2432 var r1 = this.labelRadius.end * gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2433 var r2 = node.labelRadius.end * gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2434
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2435 // first adjust the radii to account for the height of the font
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2436 // by shifting them toward each other
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2437 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2438 var fontFudge = .35 * fontSize;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2439 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2440 if (this.labelRadius.end < node.labelRadius.end) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2441 r1 += fontFudge;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2442 r2 -= fontFudge;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2443 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2444 else if (this.labelRadius.end > node.labelRadius.end) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2445 r1 -= fontFudge;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2446 r2 += fontFudge;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2447 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2448 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2449 r1 -= fontFudge;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2450 r2 -= fontFudge;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2451 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2452
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2453 var r1s = r1 * r1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2454 var r2s = r2 * r2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2455
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2456 // distance between the centers of the two labels
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2457 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2458 var dist = Math.sqrt(r1s + r2s - 2 * r1 * r2 * Math.cos(a));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2459
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2460 // angle at our label center between our radius and the line to the
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2461 // other label center
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2462 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2463 var b = Math.acos((r1s + dist * dist - r2s) / (2 * r1 * dist));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2464
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2465 // distance from our label center to the intersection of the
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2466 // two tangents
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2467 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2468 var l1 = Math.sin(a + b - Math.PI / 2) * dist / Math.sin(Math.PI - a);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2469
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2470 // distance from other label center the the intersection of the
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2471 // two tangents
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2472 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2473 var l2 = Math.sin(Math.PI / 2 - b) * dist / Math.sin(Math.PI - a);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2474
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2475 l1 = Math.abs(l1) - .4 * fontSize;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2476 l2 = Math.abs(l2) - .4 * fontSize;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2477 /*
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2478 // amount to shorten the distances because of height of the font
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2479 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2480 var l3 = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2481 var fontRadius = fontSize * .55;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2482 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2483 if ( l1 < 0 \|\| l2 < 0 )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2484 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2485 var l4 = fontRadius / Math.tan(a);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2486 l1 = Math.abs(l1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2487 l2 = Math.abs(l2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2488
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2489 l1 -= l4;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2490 l2 -= l4;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2491 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2492 else
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2493 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2494 var c = Math.PI - a;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2495
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2496 l3 = fontRadius * Math.tan(c / 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2497 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2498 */
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2499 if (this.labelWidth.end / 2 > l1 && node.labelWidth.end / 2 > l2) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2500 // shorten the farthest one from the intersection
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2501
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2502 if (l1 > l2) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2503 this.restrictLabelWidth(2 * (l1));// - l3 - fontRadius));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2504 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2505 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2506 node.restrictLabelWidth(2 * (l2));// - l3 - fontRadius));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2507 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2508 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2509 /*
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2510 else if ( this.labelWidth.end / 2 > l1 + l3 && node.labelWidth.end
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2511 / 2 > l2 - l3 )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2512 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2513 node.restrictLabelWidth(2 * (l2 - l3));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2514 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2515 else if ( this.labelWidth.end / 2 > l1 - l3 && node.labelWidth.end
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2516 / 2 > l2 + l3 )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2517 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2518 this.restrictLabelWidth(2 * (l1 - l3));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2519 }*/
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2520 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2521 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2522
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2523 this.setMagnitudes = function (baseMagnitude) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2524 this.magnitude = this.getMagnitude();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2525 this.baseMagnitude = baseMagnitude;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2526
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2527 for (var i = 0; i < this.children.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2528 this.children[i].setMagnitudes(baseMagnitude);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2529 baseMagnitude += this.children[i].magnitude;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2530 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2531
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2532 this.maxChildMagnitude = baseMagnitude;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2533 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2534
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2535 this.setMaxDepths = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2536 this.maxDepth = this.depth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2537 this.maxDepthCollapsed = this.depthCollapsed;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2538
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2539 for (i in this.children) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2540 var child = this.children[i];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2541
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2542 child.setMaxDepths();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2543
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2544 if (child.maxDepth > this.maxDepth) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2545 this.maxDepth = child.maxDepth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2546 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2547
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2548 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2549 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2550 child.maxDepthCollapsed > this.maxDepthCollapsed &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2551 (child.depth <= maxAbsoluteDepth \|\| maxAbsoluteDepth == 0)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2552 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2553 this.maxDepthCollapsed = child.maxDepthCollapsed;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2554 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2555 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2556 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2557
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2558 this.setTargetLabelRadius = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2559 var depth = this.getDepth() - selectedNode.getDepth() + 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2560 var index = depth - 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2561 var labelOffset = labelOffsets[index];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2562
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2563 if (this.radial) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2564 //this.labelRadius.setTarget((this.radiusInner.end + 1) / 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2565 var max =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2566 depth == maxDisplayDepth ?
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2567 1 :
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2568 compressedRadii[index + 1];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2569
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2570 this.labelRadius.setTarget((compressedRadii[index] + max) / 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2571 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2572 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2573 var radiusCenter;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2574 var width;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2575
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2576 if (compress) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2577 if (nLabelOffsets[index] > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2578 this.labelRadius.setTarget
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2579 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2580 lerp
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2581 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2582 labelOffset + .75,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2583 0,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2584 nLabelOffsets[index] + .5,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2585 compressedRadii[index],
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2586 compressedRadii[index + 1]
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2587 )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2588 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2589 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2590 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2591 this.labelRadius.setTarget((compressedRadii[index]
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2592 + compressedRadii[index + 1]) / 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2593 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2594 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2595 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2596 radiusCenter =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2597 nodeRadius * (depth - 1) +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2598 nodeRadius / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2599 width = nodeRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2600
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2601 this.labelRadius.setTarget
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2602 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2603 radiusCenter + width
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2604 * ((labelOffset + 1) / (nLabelOffsets[index] + 1) - .5)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2605 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2606 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2607 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2608
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2609 if (!this.hide && !this.keyed && nLabelOffsets[index]) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2610 // check last and first labels in each track for overlap
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2611
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2612 for (var i = 0; i < maxDisplayDepth - 1; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2613 for (var j = 0; j <= nLabelOffsets[i]; j++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2614 var last = labelLastNodes[i][j];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2615 var first = labelFirstNodes[i][j];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2616
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2617 if (last) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2618 if (j == nLabelOffsets[i]) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2619 // last is radial
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2620 this.setLabelWidth(last);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2621 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2622 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2623 last.setLabelWidth(this);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2624 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2625 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2626
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2627 if (first) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2628 if (j == nLabelOffsets[i]) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2629 this.setLabelWidth(first);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2630 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2631 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2632 first.setLabelWidth(this);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2633 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2634 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2635 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2636 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2637
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2638 if (selectedNode.canDisplayLabelOther) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2639 // in case there is an 'other' label
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2640 this.setLabelWidth(selectedNode);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2641 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2642
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2643 if (this.radial) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2644 // use the last 'track' of this depth for radial
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2645
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2646 labelLastNodes[index][nLabelOffsets[index]] = this;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2647
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2648 if (labelFirstNodes[index][nLabelOffsets[index]] == 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2649 labelFirstNodes[index][nLabelOffsets[index]] = this;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2650 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2651 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2652 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2653 labelLastNodes[index][labelOffset] = this;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2654
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2655 // update offset
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2656
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2657 labelOffsets[index] += 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2658
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2659 if (labelOffsets[index] > nLabelOffsets[index]) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2660 labelOffsets[index] -= nLabelOffsets[index];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2661
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2662 if (!(nLabelOffsets[index] & 1)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2663 labelOffsets[index]--;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2664 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2665 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2666 else if (labelOffsets[index] == nLabelOffsets[index]) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2667 labelOffsets[index] -= nLabelOffsets[index];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2668
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2669 if (false && !(nLabelOffsets[index] & 1)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2670 labelOffsets[index]++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2671 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2672 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2673
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2674 if (labelFirstNodes[index][labelOffset] == 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2675 labelFirstNodes[index][labelOffset] = this;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2676 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2677 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2678 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2679 else if (this.hide) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2680 this.labelWidth.end = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2681 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2682 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2683
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2684 this.setTargets = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2685 if (this == selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2686 this.setTargetsSelected
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2687 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2688 0,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2689 1,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2690 lightnessBase,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2691 false,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2692 false
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2693 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2694 return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2695 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2696
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2697 var depthRelative = this.getDepth() - selectedNode.getDepth();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2698
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2699 var parentOfSelected = selectedNode.hasParent(this);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2700 /* (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2701 // ! this.getCollapse() &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2702 this.baseMagnitude <= selectedNode.baseMagnitude &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2703 this.baseMagnitude + this.magnitude >=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2704 selectedNode.baseMagnitude + selectedNode.magnitude
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2705 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2706 */
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2707 if (parentOfSelected) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2708 this.resetLabelWidth();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2709 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2710 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2711 //context.font = fontNormal;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2712 var dim = context.measureText(this.name);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2713 this.nameWidth = dim.width;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2714 //this.labelWidth.setTarget(this.labelWidth.end);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2715 this.labelWidth.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2716 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2717
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2718 // set angles
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2719 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2720 if (this.baseMagnitude <= selectedNode.baseMagnitude) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2721 this.angleStart.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2722 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2723 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2724 this.angleStart.setTarget(Math.PI * 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2725 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2726 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2727 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2728 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2729 parentOfSelected \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2730 this.baseMagnitude + this.magnitude >=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2731 selectedNode.baseMagnitude + selectedNode.magnitude
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2732 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2733 this.angleEnd.setTarget(Math.PI * 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2734 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2735 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2736 this.angleEnd.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2737 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2738
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2739 // children
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2740 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2741 for (var i = 0; i < this.children.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2742 this.children[i].setTargets();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2743 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2744
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2745 if (this.getDepth() <= selectedNode.getDepth()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2746 // collapse in
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2747
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2748 this.radiusInner.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2749
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2750 if (parentOfSelected) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2751 this.labelRadius.setTarget
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2752 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2753 (depthRelative) *
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2754 historySpacingFactor * fontSize / gRadius
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2755 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2756 //this.scale.setTarget(1 - (selectedNode.getDepth()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2757 // - this.getDepth()) / 18); // TEMP
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2758 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2759 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2760 this.labelRadius.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2761 //this.scale.setTarget(1); // TEMP
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2762 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2763 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2764 else if (depthRelative + 1 > maxDisplayDepth) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2765 // collapse out
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2766
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2767 this.radiusInner.setTarget(1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2768 this.labelRadius.setTarget(1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2769 //this.scale.setTarget(1); // TEMP
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2770 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2771 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2772 // don't collapse
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2773
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2774 if (compress) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2775 this.radiusInner.setTarget(compressedRadii[depthRelative - 1]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2776 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2777 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2778 this.radiusInner.setTarget(nodeRadius * (depthRelative));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2779 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2780
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2781 //this.scale.setTarget(1); // TEMP
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2782
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2783 if (this == selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2784 this.labelRadius.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2785 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2786 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2787 if (compress) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2788 this.labelRadius.setTarget
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2789 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2790 (compressedRadii[depthRelative - 1]
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2791 + compressedRadii[depthRelative]) / 2
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2792 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2793 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2794 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2795 this.labelRadius.setTarget(nodeRadius * (depthRelative)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2796 + nodeRadius / 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2797 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2798 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2799 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2800
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2801 // this.r.start = this.r.end;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2802 // this.g.start = this.g.end;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2803 // this.b.start = this.b.end;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2804
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2805 this.r.setTarget(255);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2806 this.g.setTarget(255);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2807 this.b.setTarget(255);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2808
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2809 this.alphaLine.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2810 this.alphaArc.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2811 this.alphaWedge.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2812 this.alphaPattern.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2813 this.alphaOther.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2814
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2815 if (parentOfSelected && !this.getCollapse()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2816 var alpha =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2817 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2818 1 -
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2819 (selectedNode.getDepth() - this.getDepth()) /
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2820 (Math.floor((compress ? compressedRadii[0] : nodeRadius)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2821 * gRadius / (historySpacingFactor * fontSize) - .5) + 1)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2822 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2823
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2824 if (alpha < 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2825 alpha = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2826 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2827
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2828 this.alphaLabel.setTarget(alpha);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2829 this.radial = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2830 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2831 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2832 this.alphaLabel.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2833 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2834
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2835 this.hideAlonePrev = this.hideAlone;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2836 this.hidePrev = this.hide;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2837
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2838 if (parentOfSelected) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2839 this.hideAlone = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2840 this.hide = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2841 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2842
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2843 if (this.getParent() == selectedNode.getParent()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2844 this.hiddenEnd = null;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2845 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2846
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2847 this.radialPrev = this.radial;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2848 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2849
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2850 this.setTargetsSelected = function (hueMin, hueMax, lightness, hide,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2851 nextSiblingHidden) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2852 var collapse = this.getCollapse();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2853 var depth = this.getDepth() - selectedNode.getDepth() + 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2854 var canDisplayChildLabels = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2855 var lastChild;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2856
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2857 if (this.hasChildren())//&& ! hide )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2858 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2859 lastChild = this.children[this.children.length - 1];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2860 this.hideAlone = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2861 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2862 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2863 this.hideAlone = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2864 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2865
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2866 // set child wedges
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2867 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2868 for (var i = 0; i < this.children.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2869 this.children[i].setTargetWedge();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2870
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2871 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2872 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2873 !this.children[i].hide &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2874 (collapse \|\| depth < maxDisplayDepth) &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2875 this.depth < maxAbsoluteDepth
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2876 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2877 canDisplayChildLabels = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2878 this.hideAlone = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2879 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2880 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2881
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2882 if (this == selectedNode \|\| lastChild && lastChild.angleEnd.end
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2883 < this.angleEnd.end - .01) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2884 this.hideAlone = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2885 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2886
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2887 if (this.hideAlonePrev == undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2888 this.hideAlonePrev = this.hideAlone;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2889 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2890
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2891 if (this == selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2892 var otherArc =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2893 this.children.length ?
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2894 angleFactor *
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2895 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2896 this.baseMagnitude + this.magnitude -
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2897 lastChild.baseMagnitude - lastChild.magnitude
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2898 )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2899 : this.baseMagnitude + this.magnitude;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2900 this.canDisplayLabelOther =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2901 this.children.length ?
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2902 otherArc *
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2903 (this.children[0].radiusInner.end + 1) * gRadius >=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2904 minWidth()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2905 : true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2906
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2907 this.keyUnclassified = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2908
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2909 if (this.canDisplayLabelOther) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2910 this.angleOther = Math.PI * 2 - otherArc / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2911 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2912 else if (otherArc > 0.0000000001) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2913 this.keyUnclassified = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2914 keys++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2915 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2916
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2917 this.angleStart.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2918 this.angleEnd.setTarget(Math.PI * 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2919
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2920 if (this.children.length) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2921 this.radiusInner.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2922 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2923 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2924 this.radiusInner.setTarget(compressedRadii[0]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2925 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2926
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2927 this.hidePrev = this.hide;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2928 this.hide = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2929 this.hideAlonePrev = this.hideAlone;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2930 this.hideAlone = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2931 this.keyed = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2932 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2933
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2934 if (hueMax - hueMin > 1 / 12) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2935 hueMax = hueMin + 1 / 12;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2936 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2937
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2938 // set lightness
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2939 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2940 if (!(hide \|\| this.hideAlone)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2941 if (useHue()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2942 lightness = (lightnessBase + lightnessMax) / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2943 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2944 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2945 lightness = lightnessBase + (depth - 1) * lightnessFactor;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2946
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2947 if (lightness > lightnessMax) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2948 lightness = lightnessMax;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2949 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2950 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2951 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2952
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2953 if (hide) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2954 this.hide = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2955 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2956
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2957 if (this.hidePrev == undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2958 this.hidePrev = this.hide;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2959 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2960
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2961 var hiddenStart = -1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2962 var hiddenHueNumer = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2963 var hiddenHueDenom = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2964
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2965
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2966 if (!this.hide) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2967 this.hiddenEnd = null;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2968 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2969
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2970 for (var i = 0; true; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2971 if (!this.hideAlone && !hide && (i == this.children.length
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2972 \|\| !this.children[i].hide)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2973 // reached a non-hidden child or the end; set targets for
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2974 // previous group of hidden children (if any) using their
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2975 // average hue
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2976
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2977 if (hiddenStart != -1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2978 var hiddenHue = hiddenHueDenom ? hiddenHueNumer
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2979 / hiddenHueDenom : hueMin;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2980
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2981 for (var j = hiddenStart; j < i; j++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2982 this.children[j].setTargetsSelected
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2983 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2984 hiddenHue,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2985 null,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2986 lightness,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2987 false,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2988 j < i - 1
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2989 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2990
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2991 this.children[j].hiddenEnd = null;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2992 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2993
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2994 this.children[hiddenStart].hiddenEnd = i - 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2995 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2996 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2997
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2998 if (i == this.children.length) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	2999 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3000 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3001
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3002 var child = this.children[i];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3003 var childHueMin;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3004 var childHueMax;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3005
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3006 if (this.magnitude > 0 && !this.hide && !this.hideAlone) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3007 if (useHue()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3008 childHueMin = child.hues[currentDataset];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3009 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3010 else if (this == selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3011 var min = 0.0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3012 var max = 1.0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3013
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3014 if (this.children.length > 6) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3015 childHueMin = lerp((1 - Math.pow(
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3016 1 - i / this.children.length, 1.4)) * .95,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3017 0, 1, min, max);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3018 childHueMax = lerp((1 - Math.pow(
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3019 1 - (i + .55) / this.children.length, 1.4)) * .95,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3020 0, 1, min, max);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3021 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3022 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3023 childHueMin = lerp(i / this.children.length, 0, 1,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3024 min, max);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3025 childHueMax = lerp((i + .55) / this.children.length,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3026 0, 1, min, max);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3027 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3028 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3029 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3030 childHueMin = lerp
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3031 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3032 child.baseMagnitude,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3033 this.baseMagnitude,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3034 this.baseMagnitude + this.magnitude,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3035 hueMin,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3036 hueMax
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3037 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3038 childHueMax = lerp
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3039 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3040 child.baseMagnitude + child.magnitude * .99,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3041 this.baseMagnitude,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3042 this.baseMagnitude + this.magnitude,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3043 hueMin,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3044 hueMax
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3045 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3046 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3047 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3048 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3049 childHueMin = hueMin;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3050 childHueMax = hueMax;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3051 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3052
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3053 if (!this.hideAlone && !hide && !this.hide && child.hide) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3054 if (hiddenStart == -1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3055 hiddenStart = i;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3056 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3057
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3058 if (useHue()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3059 hiddenHueNumer += childHueMin * child.magnitude;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3060 hiddenHueDenom += child.magnitude;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3061 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3062 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3063 hiddenHueNumer += childHueMin;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3064 hiddenHueDenom++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3065 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3066 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3067 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3068 hiddenStart = -1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3069
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3070 this.children[i].setTargetsSelected
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3071 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3072 childHueMin,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3073 childHueMax,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3074 lightness,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3075 hide \|\| this.keyed \|\| this.hideAlone
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3076 \|\| this.hide && !collapse,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3077 false
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3078 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3079 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3080 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3081
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3082 if (this.hue && this.magnitude) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3083 this.hue.setTarget(this.hues[currentDataset]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3084
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3085 if (this.attributes[magnitudeIndex][lastDataset] == 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3086 this.hue.start = this.hue.end;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3087 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3088 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3089
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3090 this.radialPrev = this.radial;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3091
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3092 if (this == selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3093 this.resetLabelWidth();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3094 this.labelWidth.setTarget(this.nameWidth * labelWidthFudge);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3095 this.alphaWedge.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3096 this.alphaLabel.setTarget(1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3097 this.alphaOther.setTarget(1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3098 this.alphaArc.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3099 this.alphaLine.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3100 this.alphaPattern.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3101 this.r.setTarget(255);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3102 this.g.setTarget(255);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3103 this.b.setTarget(255);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3104 this.radial = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3105 this.labelRadius.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3106 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3107 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3108 var rgb = hslToRgb
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3109 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3110 hueMin,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3111 saturation,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3112 lightness
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3113 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3114
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3115 this.r.setTarget(rgb.r);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3116 this.g.setTarget(rgb.g);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3117 this.b.setTarget(rgb.b);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3118 this.alphaOther.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3119
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3120 this.alphaWedge.setTarget(1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3121
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3122 if (this.hide \|\| this.hideAlone) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3123 this.alphaPattern.setTarget(1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3124 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3125 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3126 this.alphaPattern.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3127 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3128
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3129 // set radial
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3130 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3131 if (!(hide \|\| this.hide))//&& ! this.keyed )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3132 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3133 if (this.hideAlone) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3134 this.radial = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3135 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3136 else if (false && canDisplayChildLabels) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3137 this.radial = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3138 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3139 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3140 this.radial = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3141
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3142 if (this.hasChildren() && depth < maxDisplayDepth) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3143 var lastChild = this.children[this.children.length - 1];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3144
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3145 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3146 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3147 lastChild.angleEnd.end == this.angleEnd.end \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3148 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3149 (this.angleStart.end + this.angleEnd.end) / 2 -
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3150 lastChild.angleEnd.end
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3151 ) * (this.radiusInner.end + 1) * gRadius * 2 <
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3152 minWidth()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3153 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3154 this.radial = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3155 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3156 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3157 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3158 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3159
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3160 // set alphaLabel
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3161 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3162 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3163 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3164 collapse \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3165 hide \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3166 this.hide \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3167 this.keyed \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3168 depth > maxDisplayDepth \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3169 !this.canDisplayDepth()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3170 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3171 this.alphaLabel.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3172 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3173 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3174 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3175 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3176 (this.radial \|\| nLabelOffsets[depth - 2])
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3177 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3178 this.alphaLabel.setTarget(1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3179 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3180 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3181 this.alphaLabel.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3182
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3183 if (this.radialPrev) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3184 this.alphaLabel.start = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3185 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3186 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3187 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3188
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3189 // set alphaArc
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3190 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3191 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3192 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3193 collapse \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3194 hide \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3195 depth > maxDisplayDepth \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3196 !this.canDisplayDepth()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3197 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3198 this.alphaArc.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3199 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3200 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3201 this.alphaArc.setTarget(1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3202 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3203
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3204 // set alphaLine
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3205 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3206 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3207 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3208 hide \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3209 this.hide && nextSiblingHidden \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3210 depth > maxDisplayDepth \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3211 !this.canDisplayDepth()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3212 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3213 this.alphaLine.setTarget(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3214 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3215 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3216 this.alphaLine.setTarget(1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3217 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3218
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3219 //if ( ! this.radial )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3220 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3221 this.resetLabelWidth();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3222 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3223
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3224 // set labelRadius target
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3225 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3226 if (collapse) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3227 this.labelRadius.setTarget(this.radiusInner.end);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3228 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3229 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3230 if (depth > maxDisplayDepth \|\| !this.canDisplayDepth()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3231 this.labelRadius.setTarget(1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3232 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3233 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3234 this.setTargetLabelRadius();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3235 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3236 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3237 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3238 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3239
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3240 this.setTargetWedge = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3241 var depth = this.getDepth() - selectedNode.getDepth() + 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3242
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3243 // set angles
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3244 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3245 var baseMagnitudeRelative = this.baseMagnitude
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3246 - selectedNode.baseMagnitude;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3247 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3248 this.angleStart.setTarget(baseMagnitudeRelative * angleFactor);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3249 this.angleEnd.setTarget((baseMagnitudeRelative + this.magnitude)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3250 * angleFactor);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3251
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3252 // set radiusInner
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3253 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3254 if (depth > maxDisplayDepth \|\| !this.canDisplayDepth()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3255 this.radiusInner.setTarget(1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3256 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3257 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3258 if (compress) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3259 this.radiusInner.setTarget(compressedRadii[depth - 2]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3260 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3261 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3262 this.radiusInner.setTarget(nodeRadius * (depth - 1));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3263 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3264 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3265
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3266 if (this.hide != undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3267 this.hidePrev = this.hide;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3268 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3269
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3270 if (this.hideAlone != undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3271 this.hideAlonePrev = this.hideAlone;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3272 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3273
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3274 // set hide
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3275 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3276 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3277 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3278 (this.angleEnd.end - this.angleStart.end) *
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3279 (this.radiusInner.end * gRadius + gRadius) <
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3280 minWidth()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3281 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3282 if (depth == 2 && !this.getCollapse() && this.depth
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3283 <= maxAbsoluteDepth) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3284 this.keyed = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3285 keys++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3286 this.hide = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3287
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3288 var percentage = this.getPercentage();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3289 this.keyLabel = this.name + ' ' + percentage + '%';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3290 var dim = context.measureText(this.keyLabel);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3291 this.keyNameWidth = dim.width;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3292 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3293 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3294 this.keyed = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3295 this.hide = depth > 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3296 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3297 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3298 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3299 this.keyed = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3300 this.hide = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3301 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3302 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3303
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3304 this.shortenLabel = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3305 var label = this.name;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3306
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3307 var labelWidth = this.nameWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3308 var maxWidth = this.labelWidth.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3309 var minEndLength = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3310
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3311 if (labelWidth > maxWidth && label.length > minEndLength * 2) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3312 var endLength =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3313 Math.floor((label.length - 1) * maxWidth / labelWidth / 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3314
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3315 if (endLength < minEndLength) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3316 endLength = minEndLength;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3317 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3318
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3319 return (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3320 label.substring(0, endLength) +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3321 '...' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3322 label.substring(label.length - endLength));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3323 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3324 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3325 return label;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3326 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3327 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3328
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3329 /* this.shouldAddSearchResultsString = function()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3330 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3331 if ( this.isSearchResult )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3332 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3333 return this.searchResults > 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3334 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3335 else
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3336 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3337 return this.searchResults > 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3338 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3339 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3340 */
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3341 this.sort = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3342 this.children.sort(function (a, b) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3343 if (sortByScoreCheckBox.checked) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3344 return b.getHue() - a.getHue()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3345 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3346 return b.getMagnitude() - a.getMagnitude()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3347 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3348 });
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3349
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3350 for (var i = 0; i < this.children.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3351 this.children[i].sort();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3352 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3353 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3354 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3355
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3356 var options;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3357
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3358 function addOptionElement(position, innerHTML, title, padding) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3359 var div = document.createElement("div");
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3360 // div.style.position = 'absolute';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3361 // div.style.top = position + 'px';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3362 div.innerHTML = innerHTML;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3363 // div.style.display = 'block';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3364 div.style.padding = padding \|\| '2px';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3365
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3366 if (title) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3367 div.title = title;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3368 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3369
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3370 options.appendChild(div);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3371 var height = 0;//div.clientHeight;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3372 return position + height;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3373 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3374
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3375 function addOptionElements(hueName, hueDefault) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3376 options = document.createElement('div');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3377 options.style.position = 'absolute';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3378 options.style.top = '0px';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3379 options.addEventListener('mousedown', function (e) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3380 mouseClick(e)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3381 }, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3382 // options.onmouseup = function(e) {mouseUp(e)}
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3383 document.body.appendChild(options);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3384
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3385 if (chart === ChartEnum.TAXOMIC) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3386 document.body.style.font = '11px Ubuntu';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3387 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3388 document.body.style.font = '12px Saira Semi Condensed';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3389 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3390 var position = 5;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3391
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3392 function logLoaded(fontFace) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3393 console.log(fontFace.family, 'loaded successfully.');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3394 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3395
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3396 // Loading FontFaces via JavaScript is alternative to using CSS's @font-face rule.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3397 // var ubuntuMonoFontFace = new FontFace('Ubuntu Mono', 'url(https://fonts.gstatic.com/s/ubuntumono/v7/KFOjCneDtsqEr0keqCMhbCc6CsTYl4BO.woff2)');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3398 // document.fonts.add(ubuntuMonoFontFace);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3399 // ubuntuMonoFontFace.loaded.then(logLoaded);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3400 // var oxygenFontFace = new FontFace('Oxygen', 'url(https://fonts.gstatic.com/s/oxygen/v5/qBSyz106i5ud7wkBU-FrPevvDin1pK8aKteLpeZ5c0A.woff2)');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3401 // document.fonts.add(oxygenFontFace);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3402 // oxygenFontFace.loaded.then(logLoaded);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3403 var oxygenMonoFontFace = new FontFace('Oxygen Mono', 'url(https://fonts.gstatic.com/s/oxygenmono/v5/h0GsssGg9FxgDgCjLeAd7hjYx-6tPUUv.woff2)');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3404 document.fonts.add(oxygenMonoFontFace);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3405 oxygenMonoFontFace.loaded.then(logLoaded);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3406 var sairaCondensedFontFace = new FontFace('Saira Condensed', 'url(https://fonts.gstatic.com/s/sairacondensed/v3/EJROQgErUN8XuHNEtX81i9TmEkrvoutF2o-Srg.woff2)');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3407 document.fonts.add(sairaCondensedFontFace);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3408 sairaCondensedFontFace.loaded.then(logLoaded);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3409 var sairaSemiCondensedFontFace = new FontFace('Saira Semi Condensed', 'url(https://fonts.gstatic.com/s/sairasemicondensed/v3/U9MD6c-2-nnJkHxyCjRcnMHcWVWV1cWRRX8MaOY8q3T_.woff2)');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3410 document.fonts.add(sairaSemiCondensedFontFace);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3411 sairaSemiCondensedFontFace.loaded.then(logLoaded);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3412
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3413 // The .ready promise resolves when all fonts that have been previously requested
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3414 // are loaded and layout operations are complete.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3415 document.fonts.ready.then(function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3416 console.log('There are', document.fonts.size, 'FontFaces loaded.\n');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3417
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3418 // document.fonts has a Set-like interface. Here, we're iterating over its values.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3419 for (var fontFace of document.fonts.values()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3420 console.log('FontFace:');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3421 for (var property in fontFace) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3422 console.log(' ' + property + ': ' + fontFace[property]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3423 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3424 console.log('\n');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3425 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3426 });
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3427
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3428 details = document.createElement('div');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3429 details.style.position = 'absolute';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3430 details.style.top = '1%';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3431 details.style.right = '2%';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3432 details.style.textAlign = 'right';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3433 document.body.insertBefore(details, canvas);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3434 //<div id="details" style="position:absolute;top:1%;right:2%;text-align:right;">
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3435
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3436 details.innerHTML = '\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3437 <span id="detailsName" style="font-weight:bold"></span> \
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3438 <input type="button" id="detailsExpand" onclick="expand(focusNode);"\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3439 value="↔" title="Expand this wedge to become the new focus of the chart"/><br/>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3440 <div id="detailsInfo" style="float:right"></div>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3441
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3442 keyControl = document.createElement('input');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3443 keyControl.type = 'button';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3444 keyControl.value = showKeys ? 'x' : '…';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3445 keyControl.style.position = '';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3446 keyControl.style.position = 'fixed';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3447 keyControl.style.visibility = 'hidden';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3448
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3449 document.body.insertBefore(keyControl, canvas);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3450
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3451 var logoElement = document.getElementById('logo');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3452
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3453 if (logoElement) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3454 logoImage = logoElement.src;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3455 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3456 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3457 logoImage = 'https://raw.githubusercontent.com/khyox/recentrifuge/master/recentrifuge/img/logo-rcf-mini.uri';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3458 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3459 var placeholderTit;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3460 if (chart === ChartEnum.GENOMIC) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3461 placeholderTit = "Complete or partial function, process, component...";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3462 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3463 placeholderTit = "Taxon scientific name, complete or partial name...";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3464 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3465 position = addOptionElement
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3466 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3467 position,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3468 '<a style="margin:2px" target="_blank" href="http://www.recentrifuge.org"><img style="vertical-align:middle;width:136px;height:32px;padding:8px 10px 6px 10px" src="' + logoImage + '"/></a><input type="button" id="back" value="←" title="Go back (Shortcut: ←)"/>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3469 <input type="button" id="forward" value="→" title="Go forward (Shortcut: →)"/> \
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3470    Search: <input type="text" placeholder="' + placeholderTit + '" size="45" id="search"/>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3471 <input id="searchClear" type="button" value="x" onclick="clearSearch()"/> \
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3472 <span id="searchResults"></span>'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3473 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3474
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3475 if (datasets > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3476 var size = datasets < DATASET_MAX_SIZE ? datasets : DATASET_MAX_SIZE;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3477
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3478 var select =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3479 '<table style="border-collapse:collapse;margin-left:10px"><tr><td style="padding:0px">' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3480 '<select id="datasets" style="min-width:100px" size="' + size + '" onchange="onDatasetChange()">';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3481
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3482 for (var i = 0; i < datasetNames.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3483 select += '<option>' + datasetNames[i] + '</option>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3484 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3485 select +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3486 '</select></td><td style="vertical-align:top;padding:2px;">' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3487 '<input style="display:block" title="Previous dataset ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3488 '(Shortcut: ↑)" id="prevDataset" type="button"' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3489 ' value="↑" onclick="prevDataset()" disabled="true"/>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3490 '<input title="Next dataset (Shortcut: ↓)" ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3491 'id="nextDataset" type="button" value="↓" ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3492 'onclick="nextDataset()"/><br/></td>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3493 '<td style="vertical-align:top;padding:2px;">' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3494 '<input style="display:block" ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3495 'title="Switch to the prior dataset that was viewed ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3496 '(Shortcut: TAB)" id="lastDataset" type="button" ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3497 'style="font:11px Ubuntu" value="prior" ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3498 'onclick="selectLastDataset()"/>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3499 '<select id="ranks" onchange="onRankChange()" ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3500 'title="Filter samples by taxonomic rank">' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3501 '<option value="SUMMARY">SUMMARY</option>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3502 '<option value="strain">strain</option>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3503 '<option value="species">species</option>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3504 '<option value="genus">genus</option>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3505 '<option value="family">family</option>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3506 '<option value="order">order</option>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3507 '<option value="class">class</option>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3508 '<option value="phylum">phylum</option>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3509 '<option value="kingdom">kingdom</option>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3510 '<option value="domain">domain</option>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3511 '<option value="ALL">ALL</option>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3512 '<option value="NONE">NONE</option>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3513 '</select></td></tr></table>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3514
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3515 position = addOptionElement(position + 5, select);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3516
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3517 datasetDropDown = document.getElementById('datasets');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3518 datasetButtonLast = document.getElementById('lastDataset');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3519 datasetButtonPrev = document.getElementById('prevDataset');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3520 datasetButtonNext = document.getElementById('nextDataset');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3521 rankDropDown = document.getElementById('ranks');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3522 if (chart === ChartEnum.GENOMIC) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3523 for (i = 1; i < 10; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3524 rankDropDown.remove(1); // Remove taxonomic ranks from options
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3525 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3526 datasetDropDown.style.color='#FFFFFF'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3527 datasetDropDown.style.backgroundColor='#555555' // #B20DFF22'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3528 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3529 position += datasetDropDown.clientHeight;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3530 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3531
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3532 position = addOptionElement
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3533 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3534 position + 5,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3535 '<input type="button" id="maxAbsoluteDepthDecrease" style="margin:1px 4px 0 10px" value="-"/>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3536 <span id="maxAbsoluteDepth"></span>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3537  <input type="button" id="maxAbsoluteDepthIncrease" style="margin:2px 1px 0 2px" value="+"/> Max depth',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3538 'Maximum depth to display, counted from the top level \
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3539 and including collapsed wedges.'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3540 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3541
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3542 position = addOptionElement
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3543 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3544 position,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3545 '<input type="button" id="fontSizeDecrease" style="margin:0 4px 0 10px" value="-"/>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3546 <span id="fontSize"></span>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3547  <input type="button" id="fontSizeIncrease" style="margin:0 2px 0 2px" value="+"/> Font size'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3548 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3549
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3550 position = addOptionElement
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3551 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3552 position,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3553 '<input type="button" id="radiusDecrease" style="margin:0 4px 0 10px" value="-"/>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3554 <input type="button" id="radiusIncrease" style="margin:0 2px 0 1px" value="+"/> Chart size'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3555 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3556
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3557 position = addOptionElement
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3558 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3559 position,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3560 '<input type="button" id="bkgBrightDecrease" style="margin:0 4px 5px 10px" value="-"/>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3561 <input type="button" id="bkgBrightIncrease" style="margin:0 2px 5px 1px" value="+"/> Bkg bright'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3562 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3563
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3564 if (hueName) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3565 hueDisplayName = attributes[attributeIndex(hueName)].displayName;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3566
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3567 position = addOptionElement
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3568 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3569 position + 5,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3570 '<input type="checkbox" id="useHue" style="float:left; ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3571 'margin:1px 4px 0 12px"/><div>Color by ' + hueDisplayName +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3572 '</div>'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3573 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3574
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3575 useHueCheckBox = document.getElementById('useHue');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3576 useHueCheckBox.checked = hueDefault;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3577 useHueCheckBox.onclick = handleResize;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3578 useHueCheckBox.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3579
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3580 position = addOptionElement
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3581 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3582 position,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3583 '<input type="checkbox" id="sortByScore"/> Use to sort',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3584 'Activates sorting the taxa by this magnitude',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3585 '0px 2px 2px 25px'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3586 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3587
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3588 sortByScoreCheckBox = document.getElementById('sortByScore');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3589 sortByScoreCheckBox.onclick = onSortChange;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3590 sortByScoreCheckBox.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3591 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3592
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3593 position = addOptionElement
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3594 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3595 position,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3596 '<input type="checkbox" id="collapse" style="margin:4px 4px 0 12px" ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3597 'checked="checked"/>Collapse',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3598 'Collapse wedges that are redundant (entirely composed of another ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3599 'wedge). Also affects score navigation, restricting to lowest level.'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3600 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3601
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3602 /*
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3603 position = addOptionElement
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3604 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3605 position,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3606 ' <input type="checkbox" id="shorten" checked="checked" />Shorten labels</div>',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3607 'Prevent labels from overlapping by shortening them'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3608 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3609
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3610 position = addOptionElement
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3611 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3612 position,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3613 ' <input type="checkbox" id="compress" checked="checked" />Compress',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3614 'Compress wedges if needed to show the entire depth'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3615 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3616 */
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3617
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3618 position = addOptionElement
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3619 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3620 position,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3621 '<input type="button" id="snapshot" style="margin:5px 2px 0 10px"\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3622 value="Snapshot" title="Render the current view as SVG (Scalable \
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3623 Vector Graphics), a vectorial publication-quality format that can be saved or \
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3624 printed as PDF"/> <input type="button" id="help" value="?"\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3625 onclick="window.open(\'https://github.com/khyox/recentrifuge/wiki\',\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3626 \'help\')" title="Help"/>');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3627
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3628 position = addOptionElement
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3629 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3630 position + 5,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3631 '<input type="button" id="linkButton" style="margin:5px 2px 0 10px" value="Link"/>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3632 <input type="text" size="30" id="linkText"/>',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3633 'Show a link to this view that can be copied for bookmarking or sharing'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3634 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3635 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3636
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3637 function arrow(angleStart, angleEnd, radiusInner) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3638 if (context.globalAlpha == 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3639 return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3640 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3641
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3642 var angleCenter = (angleStart + angleEnd) / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3643 var radiusArrowInner = radiusInner - gRadius / 10;//nodeRadius * gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3644 var radiusArrowOuter = gRadius * 1.1;//(1 + nodeRadius);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3645 var radiusArrowCenter = (radiusArrowInner + radiusArrowOuter) / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3646 var pointLength = (radiusArrowOuter - radiusArrowInner) / 5;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3647
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3648 context.fillStyle = highlightFill;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3649 context.lineWidth = highlightLineWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3650
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3651 // First, mask out the first half of the arrow. This will prevent the tips
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3652 // from superimposing if the arrow goes most of the way around the circle.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3653 // Masking is done by setting the clipping region to the inverse of the
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3654 // half-arrow, which is defined by cutting the half-arrow out of a large
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3655 // rectangle
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3656 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3657 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3658 context.arc(0, 0, radiusInner, angleCenter, angleEnd, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3659 context.lineTo
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3660 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3661 radiusArrowInner * Math.cos(angleEnd),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3662 radiusArrowInner * Math.sin(angleEnd)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3663 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3664 context.lineTo
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3665 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3666 radiusArrowCenter * Math.cos(angleEnd)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3667 - pointLength * Math.sin(angleEnd),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3668 radiusArrowCenter * Math.sin(angleEnd)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3669 + pointLength * Math.cos(angleEnd)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3670 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3671 context.lineTo
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3672 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3673 radiusArrowOuter * Math.cos(angleEnd),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3674 radiusArrowOuter * Math.sin(angleEnd)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3675 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3676 context.arc(0, 0, gRadius, angleEnd, angleCenter, true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3677 context.closePath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3678 context.moveTo(-imageWidth, -imageHeight);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3679 context.lineTo(imageWidth, -imageHeight);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3680 context.lineTo(imageWidth, imageHeight);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3681 context.lineTo(-imageWidth, imageHeight);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3682 context.closePath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3683 context.save();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3684 context.clip();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3685
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3686 // Next, draw the other half-arrow with the first half masked out
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3687 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3688 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3689 context.arc(0, 0, radiusInner, angleCenter, angleStart, true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3690 context.lineTo
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3691 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3692 radiusArrowInner * Math.cos(angleStart),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3693 radiusArrowInner * Math.sin(angleStart)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3694 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3695 context.lineTo
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3696 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3697 radiusArrowCenter * Math.cos(angleStart)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3698 + pointLength * Math.sin(angleStart),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3699 radiusArrowCenter * Math.sin(angleStart)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3700 - pointLength * Math.cos(angleStart)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3701 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3702 context.lineTo
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3703 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3704 radiusArrowOuter * Math.cos(angleStart),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3705 radiusArrowOuter * Math.sin(angleStart)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3706 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3707 context.arc(0, 0, gRadius, angleStart, angleCenter, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3708 context.fill();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3709 context.stroke();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3710
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3711 // Finally, remove the clipping region and draw the first half-arrow. This
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3712 // half is extended slightly to fill the seam.
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3713 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3714 context.restore();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3715 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3716 context.arc(0, 0, radiusInner, angleCenter
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3717 - 2 / (2 * Math.PI * radiusInner), angleEnd, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3718 context.lineTo
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3719 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3720 radiusArrowInner * Math.cos(angleEnd),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3721 radiusArrowInner * Math.sin(angleEnd)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3722 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3723 context.lineTo
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3724 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3725 radiusArrowCenter * Math.cos(angleEnd)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3726 - pointLength * Math.sin(angleEnd),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3727 radiusArrowCenter * Math.sin(angleEnd)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3728 + pointLength * Math.cos(angleEnd)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3729 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3730 context.lineTo
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3731 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3732 radiusArrowOuter * Math.cos(angleEnd),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3733 radiusArrowOuter * Math.sin(angleEnd)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3734 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3735 context.arc(0, 0, gRadius, angleEnd, angleCenter - 2
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3736 / (2 * Math.PI * gRadius), true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3737 context.fill();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3738 context.stroke();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3739 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3740
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3741 function attributeIndex(aname) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3742 for (var i = 0; i < attributes.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3743 if (aname == attributes[i].name) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3744 return i;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3745 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3746 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3747
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3748 return null;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3749 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3750
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3751 function bkgBrightDecrease() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3752 var bkgBrightInt = parseInt(bkgBright, 16)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3753 if (bkgBrightInt > parseInt('555555', 16)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3754 bkgBright = (bkgBrightInt - 0x111111).toString(16)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3755 document.body.style.backgroundColor = '#' + bkgBright
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3756 updateViewNeeded = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3757 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3758 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3759
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3760 function bkgBrightIncrease() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3761 var bkgBrightInt = parseInt(bkgBright, 16)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3762 if (bkgBrightInt < parseInt('ffffff', 16)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3763 bkgBright = (bkgBrightInt + 0x111111).toString(16)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3764 document.body.style.backgroundColor = '#' + bkgBright
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3765 updateViewNeeded = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3766 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3767 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3768
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3769 function checkHighlight() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3770 var lastHighlightedNode = highlightedNode;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3771 var lastHighlightingHidden = highlightingHidden;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3772
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3773 highlightedNode = selectedNode;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3774 resetKeyOffset();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3775
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3776 if (progress == 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3777 selectedNode.checkHighlight();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3778 if (selectedNode.getParent()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3779 selectedNode.getParent().checkHighlightCenter();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3780 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3781
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3782 focusNode.checkHighlightMap();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3783 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3784
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3785 if (highlightedNode != selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3786 if (highlightedNode == focusNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3787 // canvas.style.display='none';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3788 // window.resizeBy(1,0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3789 // canvas.style.cursor='ew-resize';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3790 // window.resizeBy(-1,0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3791 // canvas.style.display='inline';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3792 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3793 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3794 // canvas.style.cursor='pointer';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3795 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3796 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3797 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3798 // canvas.style.cursor='auto';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3799 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3800
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3801 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3802 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3803 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3804 true \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3805 highlightedNode != lastHighlightedNode \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3806 highlightingHidden != highlightingHiddenLast
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3807 ) &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3808 progress == 1
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3809 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3810 draw(); // TODO: handle in update()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3811 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3812 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3813
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3814 function checkSelectedCollapse() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3815 var newNode = selectedNode;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3816
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3817 while (newNode.getCollapse()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3818 newNode = newNode.children[0];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3819 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3820
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3821 if (newNode.children.length == 0 && newNode.getParent()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3822 newNode = newNode.getParent();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3823 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3824
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3825 if (newNode != selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3826 selectNode(newNode);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3827 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3828 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3829
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3830 function clearSearch() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3831 if (search.value != '') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3832 search.value = '';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3833 nodesIndex = undefined;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3834 onSearchChange();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3835 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3836 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3837
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3838 function createSVG() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3839 svgNS = "http://www.w3.org/2000/svg";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3840 var SVG = {};
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3841 SVG.xlinkns = "http://www.w3.org/1999/xlink";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3842
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3843 var newSVG = document.createElementNS(svgNS, "svg:svg");
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3844
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3845 newSVG.setAttribute("id", "canvas");
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3846 // How big is the canvas in pixels
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3847 newSVG.setAttribute("width", '100%');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3848 newSVG.setAttribute("height", '100%');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3849 // Set the coordinates used by drawings in the canvas
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3850 // newSVG.setAttribute("viewBox", "0 0 " + imageWidth + " " + imageHeight);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3851 // Define the XLink namespace that SVG uses
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3852 newSVG.setAttributeNS
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3853 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3854 "http://www.w3.org/2000/xmlns/",
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3855 "xmlns:xlink",
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3856 SVG.xlinkns
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3857 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3858
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3859 return newSVG;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3860 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3861
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3862 function degrees(radians) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3863 return radians * 180 / Math.PI;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3864 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3865
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3866 function draw() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3867 tweenFrames++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3868 //resize();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3869 // context.fillRect(0, 0, imageWidth, imageHeight);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3870 context.clearRect(0, 0, imageWidth, imageHeight);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3871
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3872 context.font = fontNormal;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3873 context.textBaseline = 'middle';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3874
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3875 //context.strokeStyle = 'rgba(0, 0, 0, 0.3)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3876 context.translate(centerX, centerY);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3877
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3878 resetKeyOffset();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3879
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3880 head.draw(false, false); // draw pie slices
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3881 head.draw(true, false); // draw labels
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3882
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3883 var pathRoot = selectedNode;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3884
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3885 if (focusNode != 0 && focusNode != selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3886 context.globalAlpha = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3887 focusNode.drawHighlight(true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3888 pathRoot = focusNode;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3889 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3890
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3891 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3892 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3893 highlightedNode &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3894 highlightedNode.getDepth() >= selectedNode.getDepth() &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3895 highlightedNode != focusNode
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3896 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3897 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3898 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3899 progress == 1 &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3900 highlightedNode != selectedNode &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3901 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3902 highlightedNode != focusNode \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3903 focusNode.children.length > 0
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3904 )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3905 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3906 context.globalAlpha = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3907 highlightedNode.drawHighlight(true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3908 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3909
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3910 //pathRoot = highlightedNode;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3911 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3912 else if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3913 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3914 progress == 1 &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3915 highlightedNode.getDepth() < selectedNode.getDepth()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3916 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3917 context.globalAlpha = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3918 highlightedNode.drawHighlightCenter();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3919 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3920
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3921 if (quickLook && false) // TEMP
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3922 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3923 context.globalAlpha = 1 - progress / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3924 selectedNode.drawHighlight(true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3925 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3926 else if (progress < 1)//&& zoomOut() )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3927 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3928 if (!zoomOut)//() )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3929 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3930 context.globalAlpha = selectedNode.alphaLine.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3931 selectedNode.drawHighlight(true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3932 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3933 else if (selectedNodeLast) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3934 context.globalAlpha = 1 - 4 * Math.pow(progress - .5, 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3935 selectedNodeLast.drawHighlight(false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3936 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3937 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3938
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3939 drawDatasetName();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3940
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3941 //drawHistory();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3942
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3943 context.translate(-centerX, -centerY);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3944 context.globalAlpha = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3945
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3946 mapRadius =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3947 (imageHeight / 2 - details.clientHeight - details.offsetTop) /
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3948 (pathRoot.getDepth() - 1) * 3 / 4 / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3949
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3950 if (mapRadius > maxMapRadius) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3951 mapRadius = maxMapRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3952 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3953
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3954 mapBuffer = mapRadius / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3955
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3956 //context.font = fontNormal;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3957 pathRoot.drawMap(pathRoot);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3958
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3959 if (hueDisplayName && useHue()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3960 drawLegend();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3961 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3962 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3963
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3964 function drawBubble(angle, radius, width, radial, flip) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3965 var height = fontSize * 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3966 var x;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3967 var y;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3968
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3969 width = width + fontSize;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3970
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3971 if (radial) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3972 y = -fontSize;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3973
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3974 if (flip) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3975 x = radius - width + fontSize / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3976 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3977 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3978 x = radius - fontSize / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3979 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3980 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3981 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3982 x = -width / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3983 y = -radius - fontSize;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3984 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3985
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3986 if (snapshotMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3987 drawBubbleSVG(x + centerX, y + centerY, width, height, fontSize, angle);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3988 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3989 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3990 drawBubbleCanvas(x, y, width, height, fontSize, angle);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3991 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3992 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3993
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3994 function drawBubbleCanvas(x, y, width, height, radius, rotation) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3995 context.strokeStyle = 'black';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3996 context.lineWidth = highlightLineWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3997 context.fillStyle = 'rgba(255, 255, 255, .75)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3998 context.rotate(rotation);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	3999 roundedRectangle(x, y, width, fontSize * 2, fontSize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4000 context.fill();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4001 context.stroke();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4002 context.rotate(-rotation);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4003 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4004
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4005 function drawBubbleSVG(x, y, width, height, radius, rotation) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4006 svg +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4007 '<rect x="' + x + '" y="' + y +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4008 '" width="' + width +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4009 '" height="' + height +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4010 '" rx="' + radius +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4011 '" ry="' + radius +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4012 '" fill="rgba(255, 255, 255, .75)' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4013 '" class="highlight" ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4014 'transform="rotate(' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4015 degrees(rotation) + ',' + centerX + ',' + centerY +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4016 ')"/>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4017 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4018
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4019 function drawDatasetName() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4020 var alpha = datasetAlpha.current();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4021
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4022 if (alpha > 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4023 var radius = gRadius * compressedRadii[0] / -2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4024
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4025 if (alpha > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4026 alpha = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4027 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4028
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4029 context.globalAlpha = alpha;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4030
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4031 drawBubble(0, -radius, datasetWidths[currentDataset], false, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4032 drawText(datasetNames[currentDataset], 0, radius, 0, 'center', true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4033 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4034 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4035
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4036 function drawHistory() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4037 var alpha = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4038 context.textAlign = 'center';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4039
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4040 for (var i = 0; i < nodeHistoryPosition && alpha > 0; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4041
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4042 context.globalAlpha = alpha - historyAlphaDelta * tweenFactor;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4043 context.fillText
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4044 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4045 nodeHistory[nodeHistoryPosition - i - 1].name,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4046 0,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4047 (i + tweenFactor) * historySpacingFactor * fontSize - 1
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4048 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4049
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4050 if (alpha > 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4051 alpha -= historyAlphaDelta;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4052 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4053 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4054
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4055 context.globalAlpha = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4056 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4057
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4058 function drawLegend() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4059 var width = imageHeight * .0265;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4060 var side = width * 0.9
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4061 var left_buttons = imageWidth * .008;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4062 var left = left_buttons + side + fontSize;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4063 var height = imageHeight * .15;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4064 var top = imageHeight - fontSize * 3.5 - height;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4065 var textLeft = left + width + fontSize / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4066 var delta = (height - side) / 3;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4067
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4068 canvasButtons = [] // Delete previous buttons
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4069 var buttonMost = new CanvasButton('mostScore', left_buttons,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4070 top, side, side, '#c87cca');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4071 var buttonLest = new CanvasButton('lestScore', left_buttons,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4072 top + 3 * delta, side, side, '#d38381');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4073 canvasButtons.push(buttonMost, buttonLest);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4074 if (nodesIndex !== undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4075 var buttonMore = new CanvasButton('moreScore', left_buttons,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4076 top + delta, side, side, '#81c8d3');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4077 var buttonLess = new CanvasButton('lessScore', left_buttons,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4078 top + 2 * delta, side, side, '#96d281');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4079 canvasButtons.push(buttonMore, buttonLess)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4080 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4081 canvasButtons.forEach(function (element) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4082 element.draw(context);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4083 });
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4084 context.fillStyle = 'black';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4085 context.textAlign = 'start';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4086 context.font = fontNormal;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4087 context.fillText(hueDisplayName, left_buttons, imageHeight - fontSize * 1.5);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4088
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4089 var gradient = context.createLinearGradient(0, top + height, 0, top);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4090
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4091 for (var i = 0; i < hueStopPositions.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4092 gradient.addColorStop(hueStopPositions[i], hueStopHsl[i]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4093
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4094 var textY = top + (1 - hueStopPositions[i]) * height;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4095
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4096 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4097 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4098 i === 0 \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4099 i === hueStopPositions.length - 1 \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4100 textY > top + fontSize && textY < top + height - fontSize
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4101 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4102 context.fillText(hueStopText[i], textLeft, textY);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4103 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4104 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4105
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4106 context.fillStyle = gradient;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4107 context.fillRect(left, top, width, height);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4108 context.lineWidth = thinLineWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4109 context.strokeRect(left, top, width, height);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4110
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4111 // Sample statistics
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4112 if (currentDataset < numRawSamples) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4113 var stat = stats[currentDataset];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4114 // Define aux position variables
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4115 var statsX = textLeft + 2 * width;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4116 var statsY = top;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4117 var rad = width;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4118 context.font = "Bold 11px Ubuntu";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4119 var statLabelText;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4120 if (chart === ChartEnum.GENOMIC) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4121 context.fillStyle = 'rgba(170, 20, 255, 1)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4122 statLabelText = 'Functional sample statistics';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4123 } else if (stat.is_ctrl) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4124 context.fillStyle = 'rgba(50, 50, 200, 1)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4125 statLabelText = 'Control statistics';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4126 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4127 context.fillStyle = 'rgba(200, 50, 50, 1)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4128 statLabelText = 'Sample statistics';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4129 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4130 context.fillText(statLabelText, statsX + width,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4131 imageHeight - fontSize * 1.5);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4132 // Get the set of strings
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4133 var oldFont = context.font;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4134 context.font = "10.5px monospace"; // In case the next line fails
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4135 context.font = "10.5px Oxygen Mono";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4136 var readTit;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4137 var nodeTit;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4138 if (chart === ChartEnum.GENOMIC) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4139 readTit = 'Annotations read: '
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4140 nodeTit = 'GOs'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4141 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4142 readTit = 'Sequences read: '
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4143 nodeTit = 'TaxIDs'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4144 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4145 var statsStrs = [
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4146 readTit + stat.sread,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4147 ' those classified: ' + (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4148 stat.sclas / stat.sread * 100).toPrecision(3) + '%',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4149 ' those accepted: '
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4150 + (stat.sfilt / stat.sclas * 100).toPrecision(3) + '%',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4151 'Score average: ' + parseFloat(stat.scavg).toFixed(1),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4152 ' min: ' + parseFloat(stat.scmin).toFixed(1) +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4153 ' max: ' + parseFloat(stat.scmax).toFixed(1),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4154 'Length average: ' + stat.lnavg,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4155 ' min: ' + stat.lnmin + ' max: ' + stat.lnmax,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4156 nodeTit + ' by classifier: ' + stat.tclas,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4157 ' those accepted: ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4158 (stat.tfilt / stat.tclas * 100).toPrecision(3) + '%',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4159 ' final: ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4160 (stat.tfold / stat.tfilt * 100).toPrecision(3) + '% ['
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4161 + stat.tfold + ']'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4162 ];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4163 var maxTextWidth = Math.max.apply(null, statsStrs.map(function (text) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4164 return context.measureText(text).width
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4165 }));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4166 // Draw the rounded rectangle
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4167 context.lineWidth = 3;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4168 if (chart === ChartEnum.GENOMIC) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4169 context.strokeStyle = '#B20DFF';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4170 context.fillStyle = 'rgba(180, 100, 255, 0.2)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4171 } else if (stat.is_ctrl) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4172 context.strokeStyle = '#3333CC';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4173 context.fillStyle = 'rgba(0, 255, 255, 0.2)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4174 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4175 context.strokeStyle = '#CC3333';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4176 context.fillStyle = 'rgba(255, 255, 0, 0.2)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4177 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4178 var box = new roundedRectangle(
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4179 statsX, statsY, 1.2 * maxTextWidth, height, {tr: rad, bl: rad});
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4180 context.stroke();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4181 context.fill();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4182 context.fillStyle = context.strokeStyle = '#222222';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4183 // Write the stats inside
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4184 var statsNum = statsStrs.length;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4185 var statsLeft = statsX + maxTextWidth * 0.1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4186 var statsDelta = height / (statsNum + 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4187 for (i = 0; i < statsNum; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4188 context.fillText(statsStrs[i],
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4189 statsLeft, top + i * statsDelta + fontSize);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4190 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4191 // Restore font
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4192 context.font = oldFont;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4193 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4194 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4195
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4196 function drawLegendSVG() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4197 var left = imageWidth * .01;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4198 var width = imageHeight * .0265;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4199 var height = imageHeight * .15;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4200 var top = imageHeight - fontSize * 3.5 - height;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4201 var textLeft = left + width + fontSize / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4202
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4203 var text = '';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4204
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4205 text += svgText(hueDisplayName, left, imageHeight - fontSize * 1.5);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4206
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4207 var svgtest =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4208 '<linearGradient id="gradient" x1="0%" y1="100%" x2="0%" y2="0%">';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4209
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4210 for (var i = 0; i < hueStopPositions.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4211 svgtest +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4212 '<stop offset="' + round(hueStopPositions[i] * 100) +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4213 '%" style="stop-color:' + hueStopHsl[i] + '"/>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4214
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4215 var textY = top + (1 - hueStopPositions[i]) * height;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4216
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4217 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4218 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4219 i == 0 \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4220 i == hueStopPositions.length - 1 \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4221 textY > top + fontSize && textY < top + height - fontSize
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4222 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4223 text += svgText(hueStopText[i], textLeft, textY);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4224 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4225 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4226
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4227 svgtest += '</linearGradient>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4228 //alert(svgtest);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4229 svg += svgtest;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4230 svg +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4231 '<rect style="fill:url(#gradient)" x="' + left + '" y="' + top +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4232 '" width="' + width + '" height="' + height + '"/>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4233
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4234 svg += text;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4235 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4236
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4237 function drawSearchHighlights(label, bubbleX, bubbleY, rotation, center) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4238 var index = -1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4239 var labelLength = label.length;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4240
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4241 bubbleX -= fontSize / 4;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4242
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4243 do {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4244 index = label.toLowerCase().indexOf(search.value.toLowerCase(),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4245 index + 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4246
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4247 if (index != -1 && index < labelLength) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4248 var dim = context.measureText(label.substr(0, index));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4249 var x = bubbleX + dim.width;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4250
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4251 dim = context.measureText(label.substr(index, search.value.length));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4252
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4253 var y = bubbleY - fontSize * 3 / 4;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4254 var width = dim.width + fontSize / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4255 var height = fontSize * 3 / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4256 var radius = fontSize / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4257
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4258 if (snapshotMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4259 if (center) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4260 x += centerX;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4261 y += centerY;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4262 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4263
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4264 svg +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4265 '<rect x="' + x + '" y="' + y +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4266 '" width="' + width +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4267 '" height="' + height +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4268 '" rx="' + radius +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4269 '" ry="' + radius +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4270 '" class="searchHighlight' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4271 '" transform="rotate(' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4272 degrees(rotation) + ',' + centerX + ',' + centerY +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4273 ')"/>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4274 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4275 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4276 context.fillStyle = 'rgb(255, 255, 100)';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4277 context.rotate(rotation);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4278 roundedRectangle(x, y, width, height, radius);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4279 context.fill();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4280 context.rotate(-rotation);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4281 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4282 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4283 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4284 while (index != -1 && index < labelLength);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4285 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4286
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4287 function drawText(text, x, y, angle, anchor, bold, color) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4288 if (color == undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4289 color = 'black';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4290 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4291
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4292 if (snapshotMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4293 svg +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4294 '<text x="' + (centerX + x) + '" y="' + (centerY + y) +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4295 '" text-anchor="' + anchor + '" style="font-color:' + color
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4296 + ';font-weight:' + (bold ? 'bold' : 'normal') +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4297 '" transform="rotate(' + degrees(angle) + ',' + centerX
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4298 + ',' + centerY + ')">' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4299 text + '</text>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4300 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4301 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4302 context.fillStyle = color;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4303 context.textAlign = anchor;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4304 context.font = bold ? fontBold : fontNormal;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4305 context.rotate(angle);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4306 context.fillText(text, x, y);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4307 context.rotate(-angle);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4308 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4309 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4310
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4311 function drawTextPolar
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4312 (text,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4313 innerText,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4314 angle,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4315 radius,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4316 radial,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4317 bubble,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4318 bold,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4319 searchResult,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4320 searchResults) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4321 var anchor;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4322 var textX;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4323 var textY;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4324 var spacer;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4325 var totalText = text;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4326 var flip;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4327
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4328 if (snapshotMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4329 spacer = '   ';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4330 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4331 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4332 spacer = ' ';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4333 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4334
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4335 if (radial) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4336 flip = angle < 3 * Math.PI / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4337
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4338 if (flip) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4339 angle -= Math.PI;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4340 radius = -radius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4341 anchor = 'end';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4342
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4343 if (innerText) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4344 totalText = text + spacer + innerText;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4345 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4346 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4347 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4348 anchor = 'start';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4349
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4350 if (innerText) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4351 totalText = innerText + spacer + text;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4352 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4353 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4354
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4355 textX = radius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4356 textY = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4357 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4358 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4359 flip = angle < Math.PI \|\| angle > 2 * Math.PI;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4360 var label;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4361
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4362 anchor = snapshotMode ? 'middle' : 'center';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4363
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4364 if (flip) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4365 angle -= Math.PI;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4366 radius = -radius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4367 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4368
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4369 angle += Math.PI / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4370 textX = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4371 textY = -radius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4372 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4373
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4374 if (bubble) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4375 var textActual = totalText;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4376
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4377 if (innerText && snapshotMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4378 if (flip) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4379 textActual = text + ' ' + innerText;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4380 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4381 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4382 textActual = innerText + ' ' + text;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4383 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4384 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4385
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4386 if (searchResults) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4387 textActual = textActual + searchResultString(searchResults);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4388 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4389
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4390 var textWidth = measureText(textActual, bold);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4391
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4392 var x = textX;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4393
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4394 if (anchor == 'end') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4395 x -= textWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4396 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4397 else if (anchor != 'start') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4398 // centered
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4399 x -= textWidth / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4400 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4401
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4402 drawBubble(angle, radius, textWidth, radial, flip);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4403
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4404 if (searchResult) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4405 drawSearchHighlights
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4406 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4407 textActual,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4408 x,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4409 textY,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4410 angle,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4411 true
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4412 )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4413 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4414 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4415
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4416 if (searchResults) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4417 totalText = totalText + searchResultString(searchResults);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4418 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4419
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4420 drawText(totalText, textX, textY, angle, anchor, bold);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4421
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4422 return flip;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4423 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4424
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4425 function drawTick(start, length, angle) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4426 if (snapshotMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4427 svg +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4428 '<line x1="' + (centerX + start) +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4429 '" y1="' + centerY +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4430 '" x2="' + (centerX + start + length) +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4431 '" y2="' + centerY +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4432 '" class="tick" transform="rotate(' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4433 degrees(angle) + ',' + centerX + ',' + centerY +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4434 ')"/>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4435 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4436 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4437 context.rotate(angle);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4438 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4439 context.moveTo(start, 0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4440 context.lineTo(start + length, 0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4441 context.lineWidth = thinLineWidth * 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4442 context.stroke();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4443 context.rotate(-angle);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4444 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4445 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4446
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4447 function drawWedge
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4448 (angleStart,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4449 angleEnd,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4450 radiusInner,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4451 radiusOuter,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4452 color,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4453 patternAlpha,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4454 highlight) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4455 if (context.globalAlpha == 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4456 return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4457 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4458
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4459 if (snapshotMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4460 if (angleEnd == angleStart + Math.PI * 2) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4461 // fudge to prevent overlap, which causes arc ambiguity
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4462 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4463 angleEnd -= .1 / gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4464 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4465
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4466 var longArc = angleEnd - angleStart > Math.PI ? 1 : 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4467
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4468 var x1 = centerX + radiusInner * Math.cos(angleStart);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4469 var y1 = centerY + radiusInner * Math.sin(angleStart);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4470
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4471 var x2 = centerX + gRadius * Math.cos(angleStart);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4472 var y2 = centerY + gRadius * Math.sin(angleStart);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4473
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4474 var x3 = centerX + gRadius * Math.cos(angleEnd);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4475 var y3 = centerY + gRadius * Math.sin(angleEnd);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4476
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4477 var x4 = centerX + radiusInner * Math.cos(angleEnd);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4478 var y4 = centerY + radiusInner * Math.sin(angleEnd);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4479
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4480 var dArray =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4481 [
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4482 " M ", x1, ",", y1,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4483 " L ", x2, ",", y2,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4484 " A ", gRadius, ",", gRadius, " 0 ", longArc, ",1 ", x3
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4485 , ",", y3,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4486 " L ", x4, ",", y4,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4487 " A ", radiusInner, ",", radiusInner, " 0 ", longArc,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4488 " 0 ", x1, ",", y1,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4489 " Z "
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4490 ];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4491
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4492 svg +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4493 '<path class="' + (highlight ? 'highlight' : 'wedge')
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4494 + '" fill="' + color +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4495 '" d="' + dArray.join('') + '"/>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4496
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4497 if (patternAlpha > 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4498 svg +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4499 '<path class="wedge" fill="url(#hiddenPattern)" d="' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4500 dArray.join('') + '"/>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4501 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4502 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4503 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4504 // fudge to prevent seams during animation
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4505 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4506 angleEnd += 1 / gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4507
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4508 context.fillStyle = color;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4509 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4510 context.arc(0, 0, radiusInner, angleStart, angleEnd, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4511 context.arc(0, 0, radiusOuter, angleEnd, angleStart, true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4512 context.closePath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4513 context.fill();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4514
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4515 if (patternAlpha > 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4516 context.save();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4517 context.clip();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4518 context.globalAlpha = patternAlpha;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4519 context.fillStyle = hiddenPattern;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4520 context.fill();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4521 context.restore();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4522 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4523
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4524 if (highlight) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4525 context.lineWidth = highlight ? highlightLineWidth : thinLineWidth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4526 context.strokeStyle = 'black';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4527 context.stroke();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4528 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4529 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4530 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4531
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4532 function expand(node) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4533 selectNode(node);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4534 updateView();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4535 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4536
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4537 function focusLost() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4538 mouseX = -1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4539 mouseY = -1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4540 checkHighlight();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4541 document.body.style.cursor = 'auto';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4542 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4543
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4544 function fontSizeDecrease() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4545 if (fontSize > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4546 fontSize--;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4547 updateViewNeeded = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4548 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4549 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4550
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4551 function fontSizeIncrease() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4552 fontSize++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4553 updateViewNeeded = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4554 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4555
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4556 function getGetString(name, value, bool) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4557 return name + '=' + (bool ? value ? 'true' : 'false' : value);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4558 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4559
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4560 function hideLink() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4561 hide(linkText);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4562 show(linkButton);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4563 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4564
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4565 function show(object) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4566 object.style.display = 'inline';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4567 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4568
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4569 function hide(object) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4570 object.style.display = 'none';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4571 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4572
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4573 function showLink() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4574 var urlHalves = String(document.location).split('?');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4575 var newGetVariables = new Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4576
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4577 newGetVariables.push
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4578 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4579 getGetString('dataset', currentDataset, false),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4580 getGetString('node', selectedNode.id, false),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4581 getGetString('collapse', collapse, true),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4582 getGetString('color', useHue(), true),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4583 getGetString('depth', maxAbsoluteDepth - 1, false),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4584 getGetString('font', fontSize, false),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4585 getGetString('key', showKeys, true)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4586 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4587
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4588 hide(linkButton);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4589 show(linkText);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4590 linkText.value = urlHalves[0] + '?'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4591 + getVariables.concat(newGetVariables).join('&');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4592 //linkText.disabled = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4593 linkText.focus();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4594 linkText.select();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4595 //linkText.disabled = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4596 // document.location = urlHalves[0] + '?' + getVariables.join('&');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4597 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4598
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4599 function getFirstChild(element) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4600 element = element.firstChild;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4601
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4602 if (element && element.nodeType != 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4603 element = getNextSibling(element);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4604 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4605
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4606 return element;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4607 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4608
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4609 function getNextSibling(element) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4610 do {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4611 element = element.nextSibling;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4612 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4613 while (element && element.nodeType != 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4614
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4615 return element;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4616 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4617
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4618 function getPercentage(fraction) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4619 return round(fraction * 100);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4620 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4621
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4622 function hslText(hue) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4623 if (1 \|\| snapshotMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4624 // Safari doesn't seem to allow hsl() in SVG
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4625
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4626 var rgb = hslToRgb(hue, saturation, (lightnessBase + lightnessMax) / 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4627
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4628 return rgbText(rgb.r, rgb.g, rgb.b);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4629 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4630 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4631 var hslArray =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4632 [
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4633 'hsl(',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4634 Math.floor(hue * 360),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4635 ',',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4636 Math.floor(saturation * 100),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4637 '%,',
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4638 Math.floor((lightnessBase + lightnessMax) * 50),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4639 '%)'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4640 ];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4641
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4642 return hslArray.join('');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4643 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4644 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4645
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4646 function hslToRgb(h, s, l) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4647 var m1, m2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4648 var r, g, b;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4649
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4650 if (s == 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4651 r = g = b = Math.floor((l * 255));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4652 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4653 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4654 if (l <= 0.5) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4655 m2 = l * (s + 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4656 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4657 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4658 m2 = l + s - l * s;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4659 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4660
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4661 m1 = l * 2 - m2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4662
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4663 r = Math.floor(hueToRgb(m1, m2, h + 1 / 3));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4664 g = Math.floor(hueToRgb(m1, m2, h));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4665 b = Math.floor(hueToRgb(m1, m2, h - 1 / 3));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4666 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4667
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4668 return {r: r, g: g, b: b};
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4669 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4670
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4671 function hueToRgb(m1, m2, hue) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4672 var v;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4673
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4674 while (hue < 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4675 hue += 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4676 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4677
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4678 while (hue > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4679 hue -= 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4680 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4681
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4682 if (6 * hue < 1)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4683 v = m1 + (m2 - m1) * hue * 6;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4684 else if (2 * hue < 1)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4685 v = m2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4686 else if (3 * hue < 2)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4687 v = m1 + (m2 - m1) * (2 / 3 - hue) * 6;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4688 else
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4689 v = m1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4690
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4691 return 255 * v;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4692 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4693
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4694 function interpolateHue(hueStart, hueEnd, valueStart, valueEnd) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4695 // since the gradient will be RGB based, we need to add stops to hit all the
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4696 // colors in the hue spectrum
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4697
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4698 function selective_round(value){
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4699 // Selective round depending on the hue scale width
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4700 if(valueEnd - valueStart < 10){
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4701 return(value.toFixed(1))
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4702 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4703 return(round(value))
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4704 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4705 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4706
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4707 hueStopPositions = new Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4708 hueStopHsl = new Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4709 hueStopText = new Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4710
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4711 hueStopPositions.push(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4712 hueStopHsl.push(hslText(hueStart));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4713 hueStopText.push(selective_round(valueStart));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4714
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4715 for
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4716 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4717 var i = (hueStart > hueEnd ? 5 / 6 : 1 / 6);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4718 (hueStart > hueEnd ? i > 0 : i < 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4719 i += (hueStart > hueEnd ? -1 : 1) / 6
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4720 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4721 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4722 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4723 hueStart > hueEnd ?
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4724 i > hueEnd && i < hueStart :
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4725 i > hueStart && i < hueEnd
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4726 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4727 hueStopPositions.push(lerp(i, hueStart, hueEnd, 0, 1));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4728 hueStopHsl.push(hslText(i));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4729 hueStopText.push(selective_round(lerp(
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4730 i, hueStart, hueEnd, valueStart, valueEnd)));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4731 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4732 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4733
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4734 hueStopPositions.push(1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4735 hueStopHsl.push(hslText(hueEnd));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4736 hueStopText.push(selective_round(valueEnd));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4737 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4738
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4739 function keyLineAngle(angle, keyAngle, bendRadius, keyX, keyY, pointsX,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4740 pointsY) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4741 if (angle < Math.PI / 2 && keyY < bendRadius * Math.sin(angle)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4742 \|\| angle > Math.PI / 2 && keyY < bendRadius) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4743 return Math.asin(keyY / bendRadius);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4744 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4745 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4746 // find the angle of the normal to a tangent line that goes to
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4747 // the label
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4748
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4749 var textDist = Math.sqrt
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4750 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4751 Math.pow(keyX, 2) +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4752 Math.pow(keyY, 2)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4753 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4754
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4755 var tanAngle = Math.acos(bendRadius / textDist) + keyAngle;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4756
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4757 if (angle < tanAngle \|\| angle < Math.PI / 2)//\|\| labelLeft < centerX )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4758 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4759 // angle doesn't reach far enough for tangent; collapse and
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4760 // connect directly to label
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4761
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4762 if (keyY / Math.tan(angle) > 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4763 pointsX.push(keyY / Math.tan(angle));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4764 pointsY.push(keyY);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4765 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4766 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4767 pointsX.push(bendRadius * Math.cos(angle));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4768 pointsY.push(bendRadius * Math.sin(angle));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4769 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4770
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4771 return angle;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4772 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4773 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4774 return tanAngle;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4775 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4776 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4777 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4778
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4779 function keyOffset() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4780 return imageHeight - (keys - currentKey + 1) * (keySize + keyBuffer) +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4781 keyBuffer - margin;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4782 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4783
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4784 function lerp(value, fromStart, fromEnd, toStart, toEnd) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4785 // Rescale value from source scale [fromStart, fromEnd]
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4786 // to target scale [toStart, toEnd]
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4787 return (value - fromStart) *
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4788 (toEnd - toStart) /
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4789 (fromEnd - fromStart) +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4790 toStart;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4791 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4792
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4793 function createCanvas() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4794 canvas = document.createElement('canvas');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4795 document.body.appendChild(canvas);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4796 context = canvas.getContext('2d');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4797 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4798
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4799 function load() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4800 document.body.style.overflow = "hidden";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4801 document.body.style.margin = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4802 document.body.style.backgroundColor = '#' + bkgBright;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4803 createCanvas();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4804
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4805 if (context == undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4806 document.body.innerHTML = '\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4807 <br/>Recentrifuge: Sorry, this browser does not support HTML5 (please see \
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4808 <a href="https://github.com/khyox/recentrifuge/wiki/Browser-support">Browser support</a>).\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4809 ';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4810 return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4811 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4812
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4813 if (typeof context.fillText != 'function') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4814 document.body.innerHTML = '\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4815 <br/>Recentrifuge: Sorry, this browser does not support HTML5 canvas text (please see \
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4816 <a href="https://github.com/khyox/recentrifuge/wiki/Browser-support">Browser support</a>).\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4817 ';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4818 return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4819 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4820
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4821 resize();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4822
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4823 var kronaElement = document.getElementsByTagName('krona')[0];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4824
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4825 var magnitudeName;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4826 var hueName;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4827 var hueDefault;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4828 var hueStart;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4829 var hueEnd;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4830 var valueStart;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4831 var valueEnd;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4832
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4833 if (kronaElement.getAttribute('collapse') !== undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4834 collapse = kronaElement.getAttribute('collapse') === 'true';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4835 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4836
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4837 if (kronaElement.getAttribute('key') !== undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4838 showKeys = kronaElement.getAttribute('key') === 'true';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4839 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4840
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4841 if (kronaElement.getAttribute('chart') !== undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4842 switch (kronaElement.getAttribute('chart')) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4843 case 'TAXOMIC':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4844 chart = ChartEnum.TAXOMIC;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4845 fontFamily = 'Ubuntu'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4846 fontSize = 11
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4847 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4848 case 'GENOMIC':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4849 chart = ChartEnum.GENOMIC;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4850 fontFamily = 'Saira Condensed'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4851 fontSize = 12
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4852 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4853 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4854 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4855
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4856 for
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4857 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4858 var element = getFirstChild(kronaElement);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4859 element;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4860 element = getNextSibling(element)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4861 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4862 switch (element.tagName.toLowerCase()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4863 case 'attributes':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4864 magnitudeName = element.getAttribute('magnitude');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4865 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4866 for
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4867 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4868 var attributeElement = getFirstChild(element);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4869 attributeElement;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4870 attributeElement = getNextSibling(attributeElement)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4871 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4872 var tag = attributeElement.tagName.toLowerCase();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4873
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4874 if (tag == 'attribute') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4875 var attribute = new Attribute();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4876 attribute.name =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4877 attributeElement.firstChild.nodeValue.toLowerCase();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4878 attribute.displayName =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4879 attributeElement.getAttribute('display');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4880
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4881 if (attributeElement.getAttribute('tip')) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4882 attribute.tip =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4883 attributeElement.getAttribute('tip');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4884 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4885
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4886 if (attributeElement.getAttribute('hrefBase')) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4887 attribute.hrefBase =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4888 attributeElement.getAttribute('hrefBase');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4889 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4890
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4891 if (attributeElement.getAttribute('target')) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4892 attribute.target =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4893 attributeElement.getAttribute('target');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4894 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4895
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4896 if (attribute.name === magnitudeName) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4897 magnitudeIndex = attributes.length;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4898 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4899
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4900 if (attributeElement.getAttribute('listAll')) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4901 attribute.listAll =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4902 attributeElement.getAttribute('listAll').toLowerCase();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4903 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4904 else if (attributeElement.getAttribute('listNode')) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4905 attribute.listNode =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4906 attributeElement.getAttribute('listNode').toLowerCase();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4907 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4908 else if (attributeElement.getAttribute('dataAll')) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4909 attribute.dataAll =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4910 attributeElement.getAttribute('dataAll').toLowerCase();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4911 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4912 else if (attributeElement.getAttribute('dataNode')) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4913 attribute.dataNode =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4914 attributeElement.getAttribute('dataNode').toLowerCase();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4915 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4916
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4917 if (attributeElement.getAttribute('postUrl')) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4918 attribute.postUrl =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4919 attributeElement.getAttribute('postUrl');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4920 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4921
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4922 if (attributeElement.getAttribute('postVar')) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4923 attribute.postVar =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4924 attributeElement.getAttribute('postVar');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4925 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4926
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4927 if (attributeElement.getAttribute('mono')) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4928 attribute.mono = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4929 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4930
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4931 attributes.push(attribute);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4932 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4933 else if (tag == 'list') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4934 var attribute = new Attribute();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4935
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4936 attribute.name = attributeElement.firstChild.nodeValue;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4937 attribute.list = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4938 attributes.push(attribute);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4939 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4940 else if (tag == 'data') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4941 var attribute = new Attribute();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4942
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4943 attribute.name = attributeElement.firstChild.nodeValue;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4944 attribute.data = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4945 attributes.push(attribute);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4946
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4947 var enableScript = document.createElement('script');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4948 var date = new Date();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4949 enableScript.src =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4950 attributeElement.getAttribute('enable') + '?' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4951 date.getTime();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4952 document.body.appendChild(enableScript);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4953 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4954 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4955 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4956
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4957 case 'color':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4958 hueName = element.getAttribute('attribute');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4959 hueStart = Number(element.getAttribute('hueStart')) / 360;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4960 hueEnd = Number(element.getAttribute('hueEnd')) / 360;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4961 valueStart = Number(element.getAttribute('valueStart'));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4962 valueEnd = Number(element.getAttribute('valueEnd'));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4963 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4964 interpolateHue(hueStart, hueEnd, valueStart, valueEnd);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4965 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4966 if (element.getAttribute('default') == 'true') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4967 hueDefault = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4968 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4969 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4970
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4971 case 'datasets':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4972 datasetNames = [];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4973 stats = [];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4974 numRawSamples = element.getAttribute('rawSamples');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4975 var i = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4976 for (var j = getFirstChild(element); j; j = getNextSibling(j)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4977 var datasetName = j.firstChild.nodeValue;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4978 datasetNames.push(datasetName);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4979 if (i < numRawSamples) { // Get stats of raw samples
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4980 var stat = new SampleStats(
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4981 datasetName,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4982 j.getAttribute('isctr'),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4983 j.getAttribute('sread'),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4984 j.getAttribute('sclas'),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4985 j.getAttribute('sfilt'),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4986 j.getAttribute('scmin'),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4987 j.getAttribute('scavg'),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4988 j.getAttribute('scmax'),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4989 j.getAttribute('lnmin'),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4990 j.getAttribute('lnavg'),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4991 j.getAttribute('lnmax'),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4992 j.getAttribute('tclas'),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4993 j.getAttribute('tfilt'),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4994 j.getAttribute('tfold')
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4995 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4996 stats.push(stat)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4997 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4998 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	4999 datasets = datasetNames.length;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5000 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5001
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5002 case 'node':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5003 head = loadTreeDOM
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5004 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5005 element,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5006 magnitudeName,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5007 hueName,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5008 hueStart,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5009 hueEnd,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5010 valueStart,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5011 valueEnd
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5012 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5013 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5014 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5015 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5016
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5017 // get GET options
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5018 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5019 var urlHalves = String(document.location).split('?');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5020 var datasetDefault = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5021 var maxDepthDefault;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5022 var nodeDefault = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5023 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5024 if (urlHalves[1]) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5025 var vars = urlHalves[1].split('&');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5026
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5027 for (i = 0; i < vars.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5028 var pair = vars[i].split('=');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5029
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5030 switch (pair[0]) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5031 case 'collapse':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5032 collapse = pair[1] == 'true';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5033 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5034
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5035 case 'color':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5036 hueDefault = pair[1] == 'true';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5037 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5038
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5039 case 'dataset':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5040 datasetDefault = Number(pair[1]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5041 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5042
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5043 case 'depth':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5044 maxDepthDefault = Number(pair[1]) + 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5045 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5046
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5047 case 'key':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5048 showKeys = pair[1] == 'true';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5049 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5050
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5051 case 'font':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5052 fontSize = Number(pair[1]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5053 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5054
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5055 case 'node':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5056 nodeDefault = Number(pair[1]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5057 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5058
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5059 default:
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5060 getVariables.push(pair[0] + '=' + pair[1]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5061 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5062 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5063 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5064 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5065
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5066 addOptionElements(hueName, hueDefault);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5067 if (datasets > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5068 if (datasets > numRawSamples) { // Check for cross-analysis samples
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5069 selectRank(DEFAULT_RANK);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5070 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5071 selectRank(NO_RANK);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5072 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5073 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5074 setCallBacks();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5075
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5076 head.sort();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5077 maxAbsoluteDepth = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5078 selectDataset(datasetDefault);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5079
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5080 if (maxDepthDefault && maxDepthDefault < head.maxDepth) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5081 maxAbsoluteDepth = maxDepthDefault;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5082 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5083 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5084 maxAbsoluteDepth = head.maxDepth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5085 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5086
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5087 selectNode(nodes[nodeDefault]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5088
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5089 setInterval(update, 20);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5090
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5091 window.onresize = handleResize;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5092 updateMaxAbsoluteDepth();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5093 updateViewNeeded = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5094 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5095
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5096 function loadTreeDOM
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5097 (domNode,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5098 magnitudeName,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5099 hueName,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5100 hueStart,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5101 hueEnd,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5102 valueStart,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5103 valueEnd) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5104 var newNode = new Node();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5105
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5106 newNode.name = domNode.getAttribute('name');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5107
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5108 if (domNode.getAttribute('href')) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5109 newNode.href = domNode.getAttribute('href');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5110 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5111
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5112 if (hueName) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5113 newNode.hues = new Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5114 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5115
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5116 for (var i = getFirstChild(domNode); i; i = getNextSibling(i)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5117 switch (i.tagName.toLowerCase()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5118 case 'node':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5119 var newChild = loadTreeDOM
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5120 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5121 i,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5122 magnitudeName,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5123 hueName,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5124 hueStart,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5125 hueEnd,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5126 valueStart,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5127 valueEnd
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5128 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5129 newChild.parent = newNode;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5130 newNode.children.push(newChild);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5131 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5132
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5133 default:
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5134 var attributeName = i.tagName.toLowerCase();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5135 var index = attributeIndex(attributeName);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5136 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5137 newNode.attributes[index] = new Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5138 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5139 for (var j = getFirstChild(i); j; j = getNextSibling(j)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5140 if (attributes[index] == undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5141 var x = 5;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5142 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5143 if (attributes[index].list) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5144 newNode.attributes[index].push(new Array());
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5145
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5146 for (var k = getFirstChild(j); k; k = getNextSibling(k)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5147 newNode.attributes[index][
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5148 newNode.attributes[
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5149 index].length - 1].push(
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5150 k.firstChild.nodeValue);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5151 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5152 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5153 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5154 var value = j.firstChild ? j.firstChild.nodeValue : '';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5155
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5156 if (j.getAttribute('href')) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5157 var target;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5158
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5159 if (attributes[index].target) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5160 target = ' target="'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5161 + attributes[index].target + '"';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5162 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5163
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5164 value = '<a href="' + attributes[index].hrefBase
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5165 + j.getAttribute('href') + '"'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5166 + target + '>' + value + '</a>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5167 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5168
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5169 newNode.attributes[index].push(value);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5170 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5171 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5172 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5173 if (attributeName == magnitudeName
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5174 \|\| attributeName == hueName) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5175 for (j = 0; j < datasets; j++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5176 // j is the dataset index (goes from 0 to datasets-1)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5177 var value = newNode.attributes[index][j]
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5178 == undefined ? 0 : Number(newNode.attributes[index][j]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5179
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5180 newNode.attributes[index][j] = value;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5181
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5182 if (attributeName == hueName) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5183 var hue = lerp
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5184 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5185 value,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5186 valueStart,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5187 valueEnd,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5188 hueStart,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5189 hueEnd
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5190 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5191
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5192 if (hue < hueStart == hueStart < hueEnd) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5193 hue = hueStart;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5194 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5195 else if (hue > hueEnd == hueStart < hueEnd) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5196 hue = hueEnd;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5197 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5198
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5199 newNode.hues[j] = hue;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5200 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5201 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5202
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5203 if (attributeName == hueName) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5204 newNode.hue = new Tween(newNode.hues[0],
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5205 newNode.hues[0]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5206 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5207 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5208 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5209 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5210 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5211
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5212 return newNode;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5213 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5214
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5215 function maxAbsoluteDepthDecrease() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5216 if (maxAbsoluteDepth > 2) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5217 maxAbsoluteDepth--;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5218 head.setMaxDepths();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5219 handleResize();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5220 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5221 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5222
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5223 function maxAbsoluteDepthIncrease() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5224 if (maxAbsoluteDepth < head.maxDepth) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5225 maxAbsoluteDepth++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5226 head.setMaxDepths();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5227 handleResize();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5228 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5229 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5230
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5231 function measureText(text, bold) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5232 context.font = bold ? fontBold : fontNormal;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5233 var dim = context.measureText(text);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5234 return dim.width;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5235 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5236
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5237 function min(a, b) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5238 return a < b ? a : b;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5239 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5240
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5241 function minWidth() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5242 // Min wedge width (at center) for displaying a node (or for displaying a
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5243 // label if it's at the highest level being viewed, multiplied by 2 to make
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5244 // further calculations simpler
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5245
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5246 return (fontSize * 2.3);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5247 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5248
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5249 function mouseMove(e) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5250 mouseX = e.pageX;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5251 mouseY = e.pageY - headerHeight;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5252 mouseXRel = (mouseX - centerX) * backingScale()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5253 mouseYRel = (mouseY - centerY) * backingScale()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5254
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5255 if (head && !quickLook) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5256 checkHighlight();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5257 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5258 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5259
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5260 function mouseClick(e) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5261 // Event listener function for mouse click on CANVAS
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5262 if (highlightedNode == focusNode && focusNode != selectedNode
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5263 \|\| selectedNode.hasParent(highlightedNode)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5264 if (highlightedNode.hasChildren()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5265 expand(highlightedNode);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5266 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5267 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5268 else if (progress == 1)//( highlightedNode != selectedNode )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5269 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5270 setFocus(highlightedNode);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5271 // document.body.style.cursor='ew-resize';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5272 draw();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5273 checkHighlight();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5274 var date = new Date();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5275 mouseDownTime = date.getTime();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5276 mouseDown = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5277 var button = undefined;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5278 for (var i = 0; i < canvasButtons.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5279 if (canvasButtons[i].is_inside(e.pageX, e.pageY)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5280 context.strokeStyle = '#CC0000';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5281 context.lineWidth = 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5282 button = canvasButtons[i];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5283 context.strokeRect(button.x, button.y, button.w, button.h);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5284 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5285 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5286 if (button) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5287 // Reorder the array of nodes only when needed
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5288 if (nodesIndex === undefined \|\| !nodes.reduce(
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5289 function (acc, current, index) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5290 // Calculate deviation from id == index for every node
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5291 return acc + Math.abs(current.id - index)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5292 }, 0)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5293 nodes.sort(function (a, b) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5294 return b.getHue() - a.getHue()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5295 });
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5296 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5297
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5298 function lookForLeaf(testIndex, reverse) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5299 // Look for nodes without children but with counts
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5300 for (; testIndex >= 0 && testIndex <= nodes.length - 1
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5301 && !nodes[testIndex].isLeaf();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5302 reverse ? testIndex-- : testIndex++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5303 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5304 if (testIndex >= 0 && testIndex <= nodes.length - 1
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5305 && nodes[testIndex].isLeaf()) nodesIndex = testIndex;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5306 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5307
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5308 function lookForNode(testIndex, reverse) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5309 // Look for nodes with counts
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5310 for (; testIndex >= 0 && testIndex <= nodes.length - 1
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5311 && nodes[testIndex].getHue() <= 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5312 reverse ? testIndex-- : testIndex++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5313 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5314 if (testIndex >= 0 && testIndex <= nodes.length - 1
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5315 && nodes[testIndex].getHue() > 0)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5316 nodesIndex = testIndex;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5317 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5318
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5319 switch (button.name) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5320 case 'mostScore':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5321 nodesIndex = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5322 if (collapseCheckBox.checked) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5323 lookForLeaf(nodesIndex, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5324 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5325 lookForNode(nodesIndex, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5326 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5327 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5328 case 'moreScore':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5329 if (collapseCheckBox.checked) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5330 lookForLeaf(nodesIndex - 1, true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5331 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5332 lookForNode(nodesIndex - 1, true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5333 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5334 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5335 case 'lessScore':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5336 if (collapseCheckBox.checked) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5337 lookForLeaf(nodesIndex + 1, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5338 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5339 lookForNode(nodesIndex + 1, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5340 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5341 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5342 case 'lestScore':
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5343 nodesIndex = nodes.length - 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5344 if (collapseCheckBox.checked) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5345 lookForLeaf(nodesIndex, true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5346 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5347 lookForNode(nodesIndex, true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5348 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5349 break;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5350 default:
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5351 alert('ERROR! Unknown button in canvas. Ignoring!')
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5352 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5353 search.value = nodes[nodesIndex].name;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5354 onSearchChange();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5355 context.strokeStyle = '#CC0000';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5356 context.lineWidth = 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5357 context.strokeRect(button.x, button.y, button.w, button.h);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5358 setTimeout(function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5359 drawLegend()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5360 }, 700)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5361 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5362 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5363 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5364
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5365 function mouseUp(e) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5366 if (quickLook) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5367 navigateBack();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5368 quickLook = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5369 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5370
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5371 mouseDown = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5372 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5373
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5374 function navigateBack() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5375 if (nodeHistoryPosition > 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5376 nodeHistory[nodeHistoryPosition] = selectedNode;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5377 nodeHistoryPosition--;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5378
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5379 if (nodeHistory[nodeHistoryPosition].collapse) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5380 collapseCheckBox.checked = collapse = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5381 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5382
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5383 setSelectedNode(nodeHistory[nodeHistoryPosition]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5384 updateDatasetButtons();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5385 updateView();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5386 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5387 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5388
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5389 function navigateUp() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5390 if (selectedNode.getParent()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5391 selectNode(selectedNode.getParent());
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5392 updateView();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5393 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5394 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5395
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5396 function navigateForward() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5397 if (nodeHistoryPosition < nodeHistory.length - 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5398 nodeHistoryPosition++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5399 var newNode = nodeHistory[nodeHistoryPosition];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5400
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5401 if (newNode.collapse) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5402 collapseCheckBox.checked = collapse = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5403 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5404
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5405 if (nodeHistoryPosition == nodeHistory.length - 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5406 // this will ensure the forward button is disabled
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5407
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5408 nodeHistory.length = nodeHistoryPosition;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5409 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5410
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5411 setSelectedNode(newNode);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5412 updateDatasetButtons();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5413 updateView();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5414 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5415 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5416
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5417 function nextDataset() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5418 var newDataset = currentDataset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5419
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5420 do {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5421 if (newDataset === datasets - 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5422 newDataset = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5423 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5424 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5425 newDataset++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5426 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5427 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5428 while (datasetDropDown.options[newDataset].disabled
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5429 \|\| datasetDropDown.options[newDataset].hidden)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5430
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5431 selectDataset(newDataset);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5432 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5433
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5434 function onDatasetChange() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5435 selectDataset(datasetDropDown.selectedIndex);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5436 nodesIndex = undefined;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5437 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5438
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5439 function onKeyDown(event) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5440 if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5441 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5442 event.keyCode == 37 &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5443 document.activeElement.id != 'search' &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5444 document.activeElement.id != 'linkText'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5445 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5446 navigateBack();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5447 event.preventDefault();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5448 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5449 else if
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5450 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5451 event.keyCode == 39 &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5452 document.activeElement.id != 'search' &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5453 document.activeElement.id != 'linkText'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5454 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5455 navigateForward();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5456 event.preventDefault();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5457 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5458 else if (event.keyCode == 38 && datasets > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5459 prevDataset();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5460
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5461 //if ( document.activeElement.id == 'datasets' )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5462 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5463 event.preventDefault();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5464 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5465 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5466 else if (event.keyCode == 40 && datasets > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5467 nextDataset();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5468
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5469 //if ( document.activeElement.id == 'datasets' )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5470 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5471 event.preventDefault();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5472 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5473 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5474 else if (event.keyCode == 9 && datasets > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5475 selectLastDataset();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5476 event.preventDefault();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5477 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5478 else if (event.keyCode == 83) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5479 progress += .2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5480 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5481 else if (event.keyCode == 66) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5482 progress -= .2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5483 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5484 else if (event.keyCode == 70) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5485 progress = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5486 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5487 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5488
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5489 function onKeyPress(event) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5490 if (event.keyCode == 38 && datasets > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5491 // prevDataset();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5492
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5493 //if ( document.activeElement.id == 'datasets' )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5494 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5495 event.preventDefault();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5496 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5497 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5498 else if (event.keyCode == 40 && datasets > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5499 // nextDataset();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5500
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5501 //if ( document.activeElement.id == 'datasets' )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5502 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5503 event.preventDefault();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5504 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5505 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5506 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5507
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5508 function onKeyUp(event) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5509 if (event.keyCode == 27 && document.activeElement.id == 'search') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5510 search.value = '';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5511 onSearchChange();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5512 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5513 else if (event.keyCode == 38 && datasets > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5514 // prevDataset();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5515
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5516 //if ( document.activeElement.id == 'datasets' )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5517 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5518 event.preventDefault();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5519 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5520 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5521 else if (event.keyCode == 40 && datasets > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5522 // nextDataset();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5523
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5524 //if ( document.activeElement.id == 'datasets' )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5525 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5526 event.preventDefault();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5527 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5528 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5529 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5530
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5531 function onRankChange() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5532 selectRank(rankDropDown.value);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5533 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5534
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5535 function onSearchChange() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5536 nSearchResults = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5537 head.search();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5538
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5539 if (search.value == '') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5540 searchResults.innerHTML = '';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5541 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5542 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5543 searchResults.innerHTML = nSearchResults + ' results';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5544 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5545
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5546 setFocus(selectedNode);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5547 draw();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5548 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5549
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5550 function onSortChange() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5551 head.sort();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5552 head.setMagnitudes(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5553 handleResize();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5554 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5555
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5556 function post(url, variable, value, postWindow) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5557 var form = document.createElement('form');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5558 var input = document.createElement('input');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5559 var inputDataset = document.createElement('input');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5560
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5561 form.appendChild(input);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5562 form.appendChild(inputDataset);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5563
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5564 form.method = "POST";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5565 form.action = url;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5566
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5567 if (postWindow == undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5568 form.target = '_blank';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5569 postWindow = window;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5570 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5571
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5572 input.type = 'hidden';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5573 input.name = variable;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5574 input.value = value;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5575
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5576 inputDataset.type = 'hidden';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5577 inputDataset.name = 'dataset';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5578 inputDataset.value = currentDataset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5579
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5580 postWindow.document.body.appendChild(form);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5581 form.submit();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5582 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5583
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5584 function prevDataset() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5585 var newDataset = currentDataset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5586
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5587 do {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5588 if (newDataset == 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5589 newDataset = datasets - 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5590 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5591 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5592 newDataset--;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5593 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5594 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5595 while (datasetDropDown.options[newDataset].disabled
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5596 \|\| datasetDropDown.options[newDataset].hidden);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5597
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5598 selectDataset(newDataset);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5599 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5600
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5601 function radiusDecrease() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5602 if (bufferFactor < .309) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5603 bufferFactor += .03;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5604 updateViewNeeded = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5605 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5606 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5607
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5608 function radiusIncrease() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5609 if (bufferFactor > .041) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5610 bufferFactor -= .03;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5611 updateViewNeeded = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5612 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5613 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5614
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5615 function resetKeyOffset() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5616 currentKey = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5617 keyMinTextLeft = centerX + gRadius + buffer - buffer / (keys + 1) /
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5618 2 + fontSize / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5619 keyMinAngle = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5620 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5621
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5622 function rgbText(r, g, b) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5623 var rgbArray =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5624 [
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5625 "rgb(",
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5626 Math.floor(r),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5627 ",",
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5628 Math.floor(g),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5629 ",",
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5630 Math.floor(b),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5631 ")"
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5632 ];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5633
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5634 return rgbArray.join('');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5635 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5636
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5637 function round(number) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5638 if (number >= 1 \|\| number <= -1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5639 return number.toFixed(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5640 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5641 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5642 return number.toPrecision(1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5643 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5644 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5645
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5646 function roundedRectangle(x, y, width, height, radius, fill, stroke) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5647 // Optionals: radius, stroke, fill
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5648 if (typeof stroke === 'undefined') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5649 stroke = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5650 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5651 if (typeof radius === 'undefined') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5652 radius = 5;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5653 } else if (typeof radius === 'number') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5654 if (radius * 2 > width) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5655 radius = width / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5656 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5657 if (radius * 2 > height) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5658 radius = height / 2;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5659 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5660 radius = {tl: radius, tr: radius, br: radius, bl: radius};
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5661 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5662 var defaultRadius = {tl: 0, tr: 0, br: 0, bl: 0};
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5663 for (var side in defaultRadius) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5664 radius[side] = radius[side] \|\| defaultRadius[side];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5665 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5666 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5667
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5668 context.beginPath();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5669 context.arc(x + radius.tl, y + radius.tl, radius.tl,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5670 Math.PI, Math.PI * 3 / 2, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5671 context.lineTo(x + width - radius.tr, y);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5672 context.arc(x + width - radius.tr, y + radius.tr, radius.tr,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5673 Math.PI * 3 / 2, Math.PI * 2, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5674 context.lineTo(x + width, y + height - radius.br);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5675 context.arc(x + width - radius.br, y + height - radius.br, radius.br,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5676 0, Math.PI / 2, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5677 context.lineTo(x + radius.bl, y + height);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5678 context.arc(x + radius.bl, y + height - radius.bl, radius.bl,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5679 Math.PI / 2, Math.PI, false);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5680 context.lineTo(x, y + radius.tl);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5681
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5682 if (fill) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5683 context.fill();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5684 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5685 if (stroke) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5686 context.stroke();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5687 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5688 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5689
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5690 function passClick(e) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5691 mouseClick(e);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5692 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5693
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5694 function searchResultString(results) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5695 var searchResults = this.searchResults;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5696
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5697 if (this.isSearchResult) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5698 // don't count ourselves
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5699 searchResults--;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5700 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5701
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5702 return ' - ' + results + (results > 1 ? ' results' : ' result');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5703 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5704
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5705 function setCallBacks() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5706 canvas.onselectstart = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5707 return false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5708 } // prevent unwanted highlighting
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5709 options.onselectstart = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5710 return false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5711 } // prevent unwanted highlighting
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5712 document.onmousemove = mouseMove;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5713 window.onblur = focusLost;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5714 window.onmouseout = focusLost;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5715 document.onkeyup = onKeyUp;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5716 document.onkeydown = onKeyDown;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5717 canvas.onmousedown = mouseClick;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5718 document.onmouseup = mouseUp;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5719 keyControl.onclick = toggleKeys;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5720 collapseCheckBox = document.getElementById('collapse');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5721 collapseCheckBox.checked = collapse;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5722 collapseCheckBox.onclick = handleResize;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5723 collapseCheckBox.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5724 maxAbsoluteDepthText = document.getElementById('maxAbsoluteDepth');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5725 maxAbsoluteDepthButtonDecrease =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5726 document.getElementById('maxAbsoluteDepthDecrease');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5727 maxAbsoluteDepthButtonIncrease =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5728 document.getElementById('maxAbsoluteDepthIncrease');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5729 maxAbsoluteDepthButtonDecrease.onclick = maxAbsoluteDepthDecrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5730 maxAbsoluteDepthButtonIncrease.onclick = maxAbsoluteDepthIncrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5731 maxAbsoluteDepthButtonDecrease.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5732 maxAbsoluteDepthButtonIncrease.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5733 fontSizeText = document.getElementById('fontSize');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5734 fontSizeButtonDecrease = document.getElementById('fontSizeDecrease');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5735 fontSizeButtonIncrease = document.getElementById('fontSizeIncrease');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5736 fontSizeButtonDecrease.onclick = fontSizeDecrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5737 fontSizeButtonIncrease.onclick = fontSizeIncrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5738 fontSizeButtonDecrease.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5739 fontSizeButtonIncrease.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5740 bkgBrightButtonDecrease = document.getElementById('bkgBrightDecrease');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5741 bkgBrightButtonIncrease = document.getElementById('bkgBrightIncrease');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5742 bkgBrightButtonDecrease.onclick = bkgBrightDecrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5743 bkgBrightButtonIncrease.onclick = bkgBrightIncrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5744 bkgBrightButtonDecrease.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5745 bkgBrightButtonIncrease.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5746 radiusButtonDecrease = document.getElementById('radiusDecrease');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5747 radiusButtonIncrease = document.getElementById('radiusIncrease');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5748 radiusButtonDecrease.onclick = radiusDecrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5749 radiusButtonIncrease.onclick = radiusIncrease;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5750 radiusButtonDecrease.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5751 radiusButtonIncrease.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5752 maxAbsoluteDepth = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5753 backButton = document.getElementById('back');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5754 backButton.onclick = navigateBack;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5755 backButton.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5756 forwardButton = document.getElementById('forward');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5757 forwardButton.onclick = navigateForward;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5758 forwardButton.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5759 snapshotButton = document.getElementById('snapshot');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5760 snapshotButton.onclick = snapshot;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5761 snapshotButton.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5762 detailsName = document.getElementById('detailsName');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5763 detailsExpand = document.getElementById('detailsExpand');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5764 detailsInfo = document.getElementById('detailsInfo');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5765 search = document.getElementById('search');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5766 search.onkeyup = onSearchChange;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5767 search.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5768 searchResults = document.getElementById('searchResults');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5769 useHueDiv = document.getElementById('useHueDiv');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5770 linkButton = document.getElementById('linkButton');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5771 linkButton.onclick = showLink;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5772 linkButton.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5773 linkText = document.getElementById('linkText');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5774 linkText.onblur = hideLink;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5775 linkText.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5776 hide(linkText);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5777 var helpButton = document.getElementById('help');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5778 helpButton.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5779 var searchClear = document.getElementById('searchClear');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5780 searchClear.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5781 if (datasets > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5782 datasetDropDown.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5783 var prevDatasetButton = document.getElementById('prevDataset');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5784 prevDatasetButton.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5785 var nextDatasetButton = document.getElementById('nextDataset');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5786 nextDatasetButton.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5787 var lastDatasetButton = document.getElementById('lastDataset');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5788 lastDatasetButton.onmousedown = suppressEvent;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5789 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5790
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5791 image = document.getElementById('hiddenImage');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5792
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5793 if (image.complete) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5794 hiddenPattern = context.createPattern(image, 'repeat');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5795 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5796 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5797 image.onload = function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5798 hiddenPattern = context.createPattern(image, 'repeat');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5799 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5800 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5801
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5802 var loadingImageElement = document.getElementById('loadingImage');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5803
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5804 if (loadingImageElement) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5805 loadingImage = loadingImageElement.src;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5806 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5807 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5808
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5809 function selectDataset(newDataset) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5810 lastDataset = currentDataset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5811 currentDataset = newDataset
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5812 if (datasets > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5813 datasetDropDown.selectedIndex = currentDataset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5814 updateDatasetButtons();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5815 datasetAlpha.start = 1.5;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5816 datasetChanged = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5817 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5818 head.setMagnitudes(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5819 head.setDepth(1, 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5820 head.setMaxDepths();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5821 handleResize();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5822 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5823
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5824 function selectLastDataset() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5825 selectDataset(lastDataset);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5826 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5827
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5828 function selectNode(newNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5829 if (selectedNode != newNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5830 // truncate history at current location to create a new branch
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5831 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5832 nodeHistory.length = nodeHistoryPosition;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5833
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5834 if (selectedNode != 0) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5835 nodeHistory.push(selectedNode);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5836 nodeHistoryPosition++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5837 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5838
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5839 setSelectedNode(newNode);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5840 //updateView();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5841 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5842
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5843 updateDatasetButtons();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5844 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5845
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5846 function selectRank(rank) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5847 rankDropDown.value = rank;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5848 currentRank = rank;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5849 datasetsVisible = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5850 for (var i = 0; i < datasets; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5851 if (currentRank === 'ALL'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5852 \|\| i < numRawSamples
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5853 \|\| (currentRank !== NO_RANK && (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5854 datasetNames[i].endsWith('EXCLUSIVE_' + currentRank) \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5855 datasetNames[i].endsWith('SHARED_' + currentRank) \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5856 datasetNames[i].endsWith('CONTROL_SHARED' + currentRank) \|\|
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5857 datasetNames[i].endsWith('CTRL_' + currentRank)))) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5858 datasetDropDown.options[i].hidden = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5859 datasetsVisible++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5860 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5861 datasetDropDown.options[i].hidden = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5862 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5863 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5864 if (datasetDropDown.options[currentDataset].hidden === true) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5865 selectDataset(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5866 } else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5867 selectDataset(currentDataset);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5868 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5869 datasetDropDown.size = (datasetsVisible < DATASET_MAX_SIZE ?
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5870 datasetsVisible : DATASET_MAX_SIZE);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5871 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5872
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5873 function setFocus(node) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5874 if (node == focusNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5875 // return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5876 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5877
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5878 focusNode = node;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5879
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5880 if (node.href) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5881 detailsName.innerHTML =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5882 '<a target="_blank" href="' + node.href + '">' + node.name + '</a>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5883 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5884 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5885 detailsName.innerHTML = node.name;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5886 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5887
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5888 var table = '<table>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5889
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5890 table += '<tr><td></td></tr>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5891
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5892 for (var i = 0; i < node.attributes.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5893 if (attributes[i].displayName && node.attributes[i] != undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5894 var index = node.attributes[i].length == 1
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5895 && attributes[i].mono ? 0 : currentDataset;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5896
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5897 if (typeof node.attributes[i][currentDataset] == 'number'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5898 \|\| node.attributes[i][index] != undefined
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5899 && node.attributes[i][currentDataset] != '') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5900 var value = node.attributes[i][index];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5901
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5902 if (attributes[i].listNode != undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5903 value =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5904 '<a href="" onclick="showList(' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5905 attributeIndex(attributes[i].listNode) + ',' + i +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5906 ',false);return false;" title="Show list">' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5907 value + '</a>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5908 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5909 else if (attributes[i].listAll != undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5910 value =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5911 '<a href="" onclick="showList(' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5912 attributeIndex(attributes[i].listAll) + ',' + i +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5913 ',true);return false;" title="Show list">' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5914 value + '</a>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5915 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5916 else if (attributes[i].dataNode != undefined && dataEnabled) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5917 value =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5918 '<a href="" onclick="showData(' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5919 attributeIndex(attributes[i].dataNode) + ',' + i +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5920 ',false);return false;" title="Show data">' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5921 value + '</a>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5922 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5923 else if (attributes[i].dataAll != undefined && dataEnabled) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5924 value =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5925 '<a href="" onclick="showData(' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5926 attributeIndex(attributes[i].dataAll) + ',' + i +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5927 ',true);return false;" title="Show data">' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5928 value + '</a>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5929 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5930
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5931 table +=
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5932 '<tr><td class="CellWithTooltip">' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5933 '<strong>' + attributes[i].displayName + ':</strong>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5934 '<span class="Tooltip">' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5935 attributes[i].tip + '</span>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5936 '</td><td>' + value + '</td></tr>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5937 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5938 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5939 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5940
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5941 table += '</table>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5942 detailsInfo.innerHTML = table;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5943
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5944 detailsExpand.disabled = !focusNode.hasChildren()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5945 \|\| focusNode == selectedNode;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5946 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5947
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5948 function setSelectedNode(newNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5949 if (selectedNode && selectedNode.hasParent(newNode)) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5950 zoomOut = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5951 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5952 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5953 zoomOut = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5954 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5955
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5956 selectedNodeLast = selectedNode;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5957 selectedNode = newNode;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5958
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5959 //if ( focusNode != selectedNode )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5960 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5961 setFocus(selectedNode);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5962 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5963 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5964
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5965 function waitForData(dataWindow, target, title, time, postUrl, postVar) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5966 if (nodeData.length == target) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5967 if (postUrl != undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5968 for (var i = 0; i < nodeData.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5969 nodeData[i] = nodeData[i].replace(/\n/g, ',');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5970 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5971
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5972 var postString = nodeData.join('');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5973 postString = postString.slice(0, -1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5974
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5975 dataWindow.document.body.removeChild(dataWindow.document.getElementById('loading'));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5976 document.body.removeChild(document.getElementById('data'));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5977
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5978 post(postUrl, postVar, postString, dataWindow);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5979 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5980 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5981 //dataWindow.document.body.removeChild(dataWindow.document.getElementById('loading'));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5982 //document.body.removeChild(document.getElementById('data'));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5983
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5984 dataWindow.document.open();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5985 dataWindow.document.write('<pre>' + nodeData.join('') + '</pre>');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5986 dataWindow.document.close();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5987 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5988
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5989 dataWindow.document.title = title; // replace after document.write()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5990 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5991 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5992 var date = new Date();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5993
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5994 if (date.getTime() - time > 10000) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5995 dataWindow.document.body.removeChild(dataWindow.document.getElementById('loading'));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5996 document.body.removeChild(document.getElementById('data'));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5997 dataWindow.document.body.innerHTML =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5998 'Timed out loading supplemental files for:<br/>' + document.location;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	5999 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6000 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6001 setTimeout(function () {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6002 waitForData(dataWindow, target, title, time, postUrl, postVar);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6003 }, 100);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6004 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6005 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6006 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6007
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6008 function data(newData) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6009 nodeData.push(newData);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6010 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6011
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6012 function enableData() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6013 dataEnabled = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6014 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6015
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6016 function showData(indexData, indexAttribute, summary) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6017 var dataWindow = window.open('', '_blank');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6018 var title = 'Re@ - ' + attributes[indexAttribute].displayName
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6019 + ' - ' + focusNode.name;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6020 dataWindow.document.title = title;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6021
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6022 nodeData = new Array();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6023
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6024 if (dataWindow && dataWindow.document && dataWindow.document.body != null) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6025 //var loadImage = document.createElement('img');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6026 //loadImage.src = "file://localhost/Users/ondovb/Krona/KronaTools/img/loading.gif";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6027 //loadImage.id = "loading";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6028 //loadImage.alt = "Loading...";
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6029 //dataWindow.document.body.appendChild(loadImage);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6030 dataWindow.document.body.innerHTML =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6031 '<img id="loading" src="' + loadingImage + '" alt="Loading..."></img>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6032 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6033
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6034 var scripts = document.createElement('div');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6035 scripts.id = 'data';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6036 document.body.appendChild(scripts);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6037
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6038 var files = focusNode.getData(indexData, summary);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6039
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6040 var date = new Date();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6041 var time = date.getTime();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6042
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6043 for (var i = 0; i < files.length; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6044 var script = document.createElement('script');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6045 script.src = files[i] + '?' + time;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6046 scripts.appendChild(script);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6047 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6048
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6049 waitForData(dataWindow, files.length, title, time,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6050 attributes[indexAttribute].postUrl, attributes[indexAttribute].postVar);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6051
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6052 return false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6053 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6054
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6055 function showList(indexList, indexAttribute, summary) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6056 var list = focusNode.getList(indexList, summary);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6057
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6058 if (attributes[indexAttribute].postUrl != undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6059 post(attributes[indexAttribute].postUrl,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6060 attributes[indexAttribute].postVar, list.join(','));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6061 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6062 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6063 var dataWindow = window.open('', '_blank');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6064
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6065 if (true \|\| navigator.appName == 'Microsoft Internet Explorer') // :(
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6066 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6067 dataWindow.document.open();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6068 dataWindow.document.write('<pre>' + list.join('\n') + '</pre>');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6069 dataWindow.document.close();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6070 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6071 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6072 var pre = document.createElement('pre');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6073 dataWindow.document.body.appendChild(pre);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6074 pre.innerHTML = list;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6075 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6076
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6077 dataWindow.document.title = 'Re@ - ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6078 attributes[indexAttribute].displayName + ' - ' + focusNode.name;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6079 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6080 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6081
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6082 function snapshot() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6083 svg = svgHeader();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6084
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6085 resetKeyOffset();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6086
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6087 snapshotMode = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6088
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6089 selectedNode.draw(false, true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6090 selectedNode.draw(true, true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6091
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6092 if (focusNode != 0 && focusNode != selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6093 context.globalAlpha = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6094 focusNode.drawHighlight(true);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6095 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6096
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6097 if (hueDisplayName && useHue()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6098 drawLegendSVG();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6099 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6100
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6101 snapshotMode = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6102
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6103 svg += svgFooter();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6104
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6105 var snapshotWindow = window.open('', '_blank', '', 'replace=false');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6106 snapshotWindow.document.write('<html><body>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6107 '<button title="Download Rec@ntrifuge snapshot as SVG file" ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6108 'onclick="document.getElementById(\'link\').click()">' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6109 'Download</button><a id="link" href="data:image/svg+xml,' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6110 encodeURIComponent(svg) + '" download="Recfg_snapshot.svg" hidden>' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6111 'Download</a><br></html></body>');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6112 snapshotWindow.document.title = 'Re@ [snapshot] ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6113 location.href.split("/").slice(-1)[0].split(".html")[0];
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6114 snapshotWindow.document.write(svg);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6115 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6116
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6117 function save() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6118 alert(document.body.innerHTML);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6119 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6120
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6121 function spacer() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6122 if (snapshotMode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6123 return '   ';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6124 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6125 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6126 return ' ';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6127 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6128 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6129
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6130 function suppressEvent(e) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6131 e.cancelBubble = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6132 if (e.stopPropagation) e.stopPropagation();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6133 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6134
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6135 function svgFooter() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6136 return '</svg>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6137 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6138
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6139 function svgHeader() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6140 var patternWidth = fontSize * .6;//radius / 50;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6141
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6142 return '\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6143 <?xml version="1.0" standalone="no"?>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6144 <!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN" \
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6145 "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6146 <svg width="' + imageWidth + '" height="' + imageHeight + '" version="1.1"\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6147 xmlns="http://www.w3.org/2000/svg">\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6148 <title>Rec@ntrifuge (snapshot) - ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6149 (datasets > 1 ? datasetNames[currentDataset] + ' - ' : '')
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6150 + selectedNode.name +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6151 '</title>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6152 <defs>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6153 <style type="text/css">\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6154 @import url("https://fonts.googleapis.com/css?family=' + fontFamily + '");\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6155 text {font-size: ' + fontSize + 'px; font-family: ' + fontFamily
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6156 + '; dominant-baseline:central}\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6157 path {stroke-width:' + thinLineWidth * fontSize / 12 + ';}\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6158 path.wedge {stroke:none}\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6159 path.line {fill:none;stroke:black;}\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6160 line {stroke:black;stroke-width:' + thinLineWidth * fontSize / 12 + ';}\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6161 line.tick {stroke-width:' + thinLineWidth * fontSize / 6 + ';}\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6162 line.pattern {stroke-width:' + thinLineWidth * fontSize / 18 + ';}\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6163 circle {fill:none;stroke:black;stroke-width:' + thinLineWidth
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6164 * fontSize / 12 + ';}\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6165 rect {stroke:black;stroke-width:' + thinLineWidth * fontSize / 12 + ';}\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6166 .highlight {stroke:black;stroke-width:' + highlightLineWidth
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6167 * fontSize / 12 + ';}\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6168 .searchHighlight {fill:rgb(255, 255, 100);stroke:none;}\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6169 </style>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6170 <pattern id="hiddenPattern" patternUnits="userSpaceOnUse" \
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6171 x="0" y="0" width="' + patternWidth + '" height="' + patternWidth + '">\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6172 <line class="pattern" x1="0" y1="0" x2="' + patternWidth / 2 + '" y2="'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6173 + patternWidth / 2 + '"/>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6174 <line class="pattern" x1="' + patternWidth / 2 + '" y1="' + patternWidth +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6175 '" x2="' + patternWidth + '" y2="' + patternWidth / 2 + '"/>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6176 </pattern>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6177 </defs>\
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6178 ';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6179 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6180
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6181 function svgText(text, x, y, anchor, bold, color) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6182 if (typeof(anchor) == 'undefined') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6183 anchor = 'start';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6184 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6185
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6186 if (color == undefined) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6187 color = 'black';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6188 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6189
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6190 return '<text x="' + x + '" y="' + y +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6191 '" style="font-color:' + color + ';font-weight:'
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6192 + (bold ? 'bold' : 'normal') +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6193 '" text-anchor="' + anchor + '">' + text + '</text>';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6194 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6195
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6196 function toggleKeys() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6197 if (showKeys) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6198 keyControl.value = '…';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6199 showKeys = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6200 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6201 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6202 keyControl.value = 'x';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6203 showKeys = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6204 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6205
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6206 updateKeyControl();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6207
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6208 if (progress == 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6209 draw();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6210 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6211 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6212
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6213 function update() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6214 if (!head) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6215 return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6216 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6217
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6218 if (mouseDown && focusNode != selectedNode) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6219 var date = new Date();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6220
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6221 if (date.getTime() - mouseDownTime > quickLookHoldLength) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6222 if (focusNode.hasChildren()) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6223 expand(focusNode);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6224 quickLook = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6225 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6226 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6227 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6228
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6229 if (updateViewNeeded) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6230 resize();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6231 mouseX = -1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6232 mouseY = -1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6233
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6234 collapse = collapseCheckBox.checked;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6235 compress = true;//compressCheckBox.checked;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6236 shorten = true;//shortenCheckBox.checked;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6237
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6238 checkSelectedCollapse();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6239 updateMaxAbsoluteDepth();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6240
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6241 if (focusNode.getCollapse() \|\| focusNode.depth > maxAbsoluteDepth) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6242 setFocus(selectedNode);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6243 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6244 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6245 setFocus(focusNode);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6246 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6247
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6248 updateView();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6249
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6250 updateViewNeeded = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6251 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6252
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6253 var date = new Date();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6254 progress = (date.getTime() - tweenStartTime) / tweenLength;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6255 // progress += .01;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6256
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6257 if (progress >= 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6258 progress = 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6259 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6260
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6261 if (progress != progressLast) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6262 tweenFactor =// progress;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6263 (1 / (1 + Math.exp(-tweenCurvature * (progress - .5))) - .5) /
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6264 (tweenMax - .5) / 2 + .5;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6265
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6266 if (progress == 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6267 snapshotButton.disabled = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6268 zoomOut = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6269
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6270 //updateKeyControl();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6271
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6272 if (!quickLook) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6273 //checkHighlight();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6274 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6275
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6276
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6277 if (fpsDisplay) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6278 fpsDisplay.innerHTML = 'fps: '
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6279 + Math.round(tweenFrames * 1000 / tweenLength);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6280 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6281 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6282
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6283 draw();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6284 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6285
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6286 progressLast = progress;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6287 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6288
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6289 function updateDatasetButtons() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6290 if (datasets == 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6291 return;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6292 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6293
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6294 var node = selectedNode ? selectedNode : head;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6295
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6296 datasetButtonLast.disabled =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6297 node.attributes[magnitudeIndex][lastDataset] == 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6298
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6299 datasetButtonPrev.disabled = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6300 datasetButtonNext.disabled = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6301
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6302 for (var i = 0; i < datasets; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6303 var disable = node.attributes[magnitudeIndex][i] == 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6304
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6305 datasetDropDown.options[i].disabled = disable;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6306
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6307 if (!disable) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6308 if (i != currentDataset) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6309 datasetButtonPrev.disabled = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6310 datasetButtonNext.disabled = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6311 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6312 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6313 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6314 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6315
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6316 function updateDatasetWidths() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6317 if (datasets > 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6318 for (var i = 0; i < datasets; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6319 context.font = fontBold;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6320 var dim = context.measureText(datasetNames[i]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6321 datasetWidths[i] = dim.width;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6322 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6323 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6324 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6325
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6326 function updateKeyControl() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6327 if (keys == 0)//\|\| progress != 1 )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6328 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6329 keyControl.style.visibility = 'hidden';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6330 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6331 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6332 keyControl.style.visibility = 'visible';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6333 keyControl.style.right = margin + 'px';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6334
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6335 if (showKeys) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6336 keyControl.style.top =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6337 imageHeight -
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6338 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6339 keys * (keySize + keyBuffer) -
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6340 keyBuffer +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6341 margin +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6342 keyControl.clientHeight * 1.5
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6343 ) + 'px';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6344 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6345 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6346 keyControl.style.top =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6347 (imageHeight - margin - keyControl.clientHeight) + 'px';
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6348 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6349 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6350 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6351
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6352 function updateView() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6353 if (selectedNode.depth > maxAbsoluteDepth - 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6354 maxAbsoluteDepth = selectedNode.depth + 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6355 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6356
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6357 highlightedNode = selectedNode;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6358
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6359 angleFactor = 2 * Math.PI / (selectedNode.magnitude);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6360
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6361 maxPossibleDepth = Math.floor(gRadius / (fontSize * minRingWidthFactor));
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6362
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6363 if (maxPossibleDepth < 4) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6364 maxPossibleDepth = 4;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6365 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6366
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6367 var minRadiusInner = fontSize * 8 / gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6368 var minRadiusFirst = fontSize * 6 / gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6369 var minRadiusOuter = fontSize * 5 / gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6370
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6371 if (.25 < minRadiusInner) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6372 minRadiusInner = .25;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6373 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6374
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6375 if (.15 < minRadiusFirst) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6376 minRadiusFirst = .15;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6377 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6378
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6379 if (.15 < minRadiusOuter) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6380 minRadiusOuter = .15;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6381 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6382
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6383 // visibility of nodes depends on the depth they are displayed at,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6384 // so we need to set the max depth assuming they can all be displayed
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6385 // and iterate it down based on the deepest child node we can display
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6386 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6387 var maxDepth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6388 var newMaxDepth = selectedNode.getMaxDepth() - selectedNode.getDepth() + 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6389 //
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6390 do {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6391 maxDepth = newMaxDepth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6392
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6393 if (!compress && maxDepth > maxPossibleDepth) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6394 maxDepth = maxPossibleDepth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6395 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6396
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6397 if (compress) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6398 compressedRadii = new Array(maxDepth);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6399
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6400 compressedRadii[0] = minRadiusInner;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6401
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6402 var offset = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6403
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6404 while
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6405 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6406 lerp
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6407 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6408 Math.atan(offset + 2),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6409 Math.atan(offset + 1),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6410 Math.atan(maxDepth + offset - 1),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6411 minRadiusInner,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6412 1 - minRadiusOuter
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6413 ) - minRadiusInner > minRadiusFirst &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6414 offset < 10
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6415 ) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6416 offset++;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6417 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6418
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6419 offset--;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6420
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6421 for (var i = 1; i < maxDepth; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6422 compressedRadii[i] = lerp
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6423 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6424 Math.atan(i + offset),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6425 Math.atan(offset),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6426 Math.atan(maxDepth + offset - 1),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6427 minRadiusInner,
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6428 1 - minRadiusOuter
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6429 )
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6430 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6431 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6432 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6433 nodeRadius = 1 / maxDepth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6434 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6435
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6436 newMaxDepth = selectedNode.maxVisibleDepth(maxDepth);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6437
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6438 if (compress) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6439 if (newMaxDepth <= maxPossibleDepth) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6440 // compress
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6441 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6442 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6443 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6444 if (newMaxDepth > maxPossibleDepth) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6445 newMaxDepth = maxPossibleDepth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6446 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6447 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6448 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6449 while (newMaxDepth < maxDepth);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6450
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6451 maxDisplayDepth = maxDepth;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6452
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6453 lightnessFactor = (lightnessMax - lightnessBase)
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6454 / (maxDepth > 8 ? 8 : maxDepth);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6455 keys = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6456
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6457 nLabelOffsets = new Array(maxDisplayDepth - 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6458 labelOffsets = new Array(maxDisplayDepth - 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6459 labelLastNodes = new Array(maxDisplayDepth - 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6460 labelFirstNodes = new Array(maxDisplayDepth - 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6461
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6462 for (var i = 0; i < maxDisplayDepth - 1; i++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6463 if (compress) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6464 if (i == maxDisplayDepth - 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6465 nLabelOffsets[i] = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6466 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6467 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6468 var width =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6469 (compressedRadii[i + 1] - compressedRadii[i]) *
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6470 gRadius;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6471
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6472 nLabelOffsets[i] = Math.floor(width / fontSize / 1.2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6473
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6474 if (nLabelOffsets[i] > 2) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6475 nLabelOffsets[i] = min
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6476 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6477 Math.floor(width / fontSize / 1.75),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6478 5
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6479 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6480 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6481 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6482 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6483 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6484 nLabelOffsets[i] = Math.max
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6485 (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6486 Math.floor(Math.sqrt((nodeRadius * gRadius / fontSize)) * 1.5),
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6487 3
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6488 );
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6489 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6490
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6491 labelOffsets[i] = Math.floor((nLabelOffsets[i] - 1) / 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6492 labelLastNodes[i] = new Array(nLabelOffsets[i] + 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6493 labelFirstNodes[i] = new Array(nLabelOffsets[i] + 1);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6494
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6495 for (var j = 0; j <= nLabelOffsets[i]; j++) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6496 // these arrays will allow nodes with neighboring labels to link to
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6497 // each other to determine max label length
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6498
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6499 labelLastNodes[i][j] = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6500 labelFirstNodes[i][j] = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6501 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6502 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6503
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6504 fontSizeText.innerHTML = fontSize;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6505 fontNormal = fontSize + 'px ' + fontFamily;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6506 context.font = fontNormal;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6507 fontBold = 'bold ' + fontSize + 'px ' + fontFamily;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6508 tickLength = fontSize * .7;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6509
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6510 head.setTargets(0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6511
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6512 keySize = ((imageHeight - margin * 3) * 1 / 2) / keys * 3 / 4;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6513
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6514 if (keySize > fontSize * maxKeySizeFactor) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6515 keySize = fontSize * maxKeySizeFactor;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6516 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6517
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6518 keyBuffer = keySize / 3;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6519
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6520 fontSizeLast = fontSize;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6521
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6522 if (datasetChanged) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6523 datasetChanged = false;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6524 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6525 else {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6526 datasetAlpha.start = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6527 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6528
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6529 var date = new Date();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6530 tweenStartTime = date.getTime();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6531 progress = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6532 tweenFrames = 0;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6533
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6534 updateKeyControl();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6535 updateDatasetWidths();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6536
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6537 document.title = ('Re@ - ' +
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6538 location.href.split("/").slice(-1)[0].split(".html")[0]);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6539 updateNavigationButtons();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6540 snapshotButton.disabled = true;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6541
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6542 maxAbsoluteDepthText.innerHTML = maxAbsoluteDepth - 1;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6543
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6544 maxAbsoluteDepthButtonDecrease.disabled = (maxAbsoluteDepth == 2);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6545 maxAbsoluteDepthButtonIncrease.disabled =
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6546 (maxAbsoluteDepth == head.maxDepth);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6547
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6548 bkgBrightButtonDecrease.disabled = (bkgBright == '555555');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6549 bkgBrightButtonIncrease.disabled = (bkgBright == 'ffffff');
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6550
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6551 if (collapse != collapseLast && search.value != '') {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6552 onSearchChange();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6553 collapseLast = collapse;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6554 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6555 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6556
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6557 function updateMaxAbsoluteDepth() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6558 while (maxAbsoluteDepth > 1 && selectedNode.depth > maxAbsoluteDepth - 1) {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6559 selectedNode = selectedNode.getParent();
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6560 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6561 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6562
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6563 function updateNavigationButtons() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6564 backButton.disabled = (nodeHistoryPosition == 0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6565 // upButton.disabled = (selectedNode.getParent() == 0);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6566 forwardButton.disabled = (nodeHistoryPosition == nodeHistory.length);
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6567 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6568
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6569 function useHue() {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6570 return useHueCheckBox && useHueCheckBox.checked;
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6571 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6572
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6573 /*
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6574 function zoomOut()
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6575 {
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6576 return (
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6577 selectedNodeLast != 0 &&
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6578 selectedNodeLast.getDepth() < selectedNode.getDepth());
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6579 }
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6580 */</script></head><body><img id="hiddenImage" src="data:image/png;base64,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" style="display:none"><img id="loadingImage" 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
fe733f05c2f8 planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee iuc parents: diff changeset	6581 " style="display:none"><noscript>Javascript must be enabled to view this page.</noscript><div style="display:none"><krona collapse="true" key="true" chart="TAXOMIC"><attributes magnitude="count"><attribute display="Count" dataAll="members" tip="Number of reads assigned to this and child taxa">count</attribute><attribute display="Unassigned" dataNode="members" tip="Number of reads assigned specifically to this taxon">unassigned</attribute><attribute display="TaxID" mono="true" hrefBase="https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=" tip="Taxonomic identifier">tid</attribute><attribute display="Rank" mono="true" tip="Taxonomic rank/level">rank</attribute><attribute display="Read length (avg)" tip="Averaged score of reads assigned to this and child taxa">score</attribute></attributes><datasets rawSamples="3"><dataset isctr="False" sread="10999" sclas="10354" sfilt="10354" scmin="23.0" scavg="190.73954464627033" scmax="400.1051804377604" lnmin="70 nt" lnavg="387 nt" lnmax="602 nt" tclas="215" tfilt="215" tfold="5" sclim="None" totnt="4.22 Mnt">input_dir/centrifuge_1_out</dataset><dataset isctr="False" sread="10999" sclas="10354" sfilt="10354" scmin="23.0" scavg="190.73954464627033" scmax="400.1051804377604" lnmin="70 nt" lnavg="387 nt" lnmax="602 nt" tclas="215" tfilt="215" tfold="5" sclim="None" totnt="4.22 Mnt">input_dir/centrifuge_2_out</dataset><dataset isctr="False" sread="10999" sclas="10354" sfilt="10354" scmin="23.0" scavg="190.73954464627033" scmax="400.1051804377604" lnmin="70 nt" lnavg="387 nt" lnmax="602 nt" tclas="215" tfilt="215" tfold="5" sclim="None" totnt="4.22 Mnt">input_dir/centrifuge_out</dataset><dataset>SHARED_species</dataset><dataset>SHARED_genus</dataset><dataset>SHARED_family</dataset><dataset>SHARED_order</dataset><dataset>SHARED_class</dataset><dataset>SHARED_phylum</dataset><dataset>SHARED_SUMMARY</dataset></datasets><color attribute="score" hueStart="0" hueEnd="300" valueStart="390.6" valueEnd="494.0" default="true"> </color><node name="root" href="https://www.google.com/search?q=root"><count><val>75</val><val>75</val><val>75</val><val>31</val><val>35</val><val>67</val><val>73</val><val>75</val><val>75</val><val>75</val></count><unassigned><val></val><val></val><val></val><val></val><val></val><val></val><val></val><val></val><val></val><val></val></unassigned><tid><val href="1">1</val></tid><rank><val>no_rank</val></rank><score><val>392.6</val><val>392.6</val><val>392.6</val><val>488.4</val><val>489.0</val><val>446.7</val><val>442.0</val><val>440.7</val><val>440.7</val><val>440.7</val></score><node name="Bacteria" href="https://www.google.com/search?q=Bacteria"><count><val>75</val><val>75</val><val>75</val><val>31</val><val>35</val><val>67</val><val>73</val><val>75</val><val>75</val><val>75</val></count><unassigned><val></val><val></val><val></val><val></val><val></val><val></val><val></val><val></val><val></val><val></val></unassigned><tid><val href="2">2</val></tid><rank><val>superkingdom</val></rank><score><val>392.6</val><val>392.6</val><val>392.6</val><val>488.4</val><val>489.0</val><val>446.7</val><val>442.0</val><val>440.7</val><val>440.7</val><val>440.7</val></score><node name="Proteobacteria" href="https://www.google.com/search?q=Proteobacteria"><count><val>75</val><val>75</val><val>75</val><val>31</val><val>35</val><val>67</val><val>73</val><val>75</val><val>75</val><val>75</val></count><unassigned><val></val><val></val><val></val><val></val><val></val><val></val><val></val><val></val><val>75</val><val></val></unassigned><tid><val href="1224">1224</val></tid><rank><val>phylum</val></rank><score><val>392.6</val><val>392.6</val><val>392.6</val><val>488.4</val><val>489.0</val><val>446.7</val><val>442.0</val><val>440.7</val><val>440.7</val><val>440.7</val></score><node name="Gammaproteobacteria" href="https://www.google.com/search?q=Gammaproteobacteria"><count><val>75</val><val>75</val><val>75</val><val>31</val><val>35</val><val>67</val><val>73</val><val>75</val><val></val><val>75</val></count><unassigned><val>2</val><val>2</val><val>2</val><val></val><val></val><val></val><val></val><val>75</val><val></val><val>2</val></unassigned><tid><val href="1236">1236</val></tid><rank><val>class</val></rank><score><val>392.6</val><val>392.6</val><val>392.6</val><val>488.4</val><val>489.0</val><val>446.7</val><val>442.0</val><val>440.7</val><val>0</val><val>440.7</val></score><node name="Enterobacteriales" href="https://www.google.com/search?q=Enterobacteriales"><count><val>73</val><val>73</val><val>73</val><val>31</val><val>35</val><val>67</val><val>73</val><val></val><val></val><val>73</val></count><unassigned><val>6</val><val>6</val><val>6</val><val></val><val></val><val></val><val>73</val><val></val><val></val><val>6</val></unassigned><tid><val href="91347">91347</val></tid><rank><val>order</val></rank><score><val>390.6</val><val>390.6</val><val>390.6</val><val>488.4</val><val>489.0</val><val>446.7</val><val>442.0</val><val>0</val><val>0</val><val>442.0</val></score><node name="Enterobacteriaceae" href="https://www.google.com/search?q=Enterobacteriaceae"><count><val>67</val><val>67</val><val>67</val><val>31</val><val>35</val><val>67</val><val></val><val></val><val></val><val>67</val></count><unassigned><val>32</val><val>32</val><val>32</val><val></val><val></val><val>67</val><val></val><val></val><val></val><val>32</val></unassigned><tid><val href="543">543</val></tid><rank><val>family</val></rank><score><val>400.3</val><val>400.3</val><val>400.3</val><val>488.4</val><val>489.0</val><val>446.7</val><val>0</val><val>0</val><val>0</val><val>446.7</val></score><node name="Escherichia" href="https://www.google.com/search?q=Escherichia"><count><val>35</val><val>35</val><val>35</val><val>31</val><val>35</val><val></val><val></val><val></val><val></val><val>35</val></count><unassigned><val>4</val><val>4</val><val>4</val><val></val><val>35</val><val></val><val></val><val></val><val></val><val>4</val></unassigned><tid><val href="561">561</val></tid><rank><val>genus</val></rank><score><val>494.0</val><val>494.0</val><val>494.0</val><val>488.4</val><val>489.0</val><val>0</val><val>0</val><val>0</val><val>0</val><val>489.0</val></score><node name="Escherichia coli" href="https://www.google.com/search?q=Escherichia coli"><count><val>31</val><val>31</val><val>31</val><val>31</val><val></val><val></val><val></val><val></val><val></val><val>31</val></count><unassigned><val>31</val><val>31</val><val>31</val><val>31</val><val></val><val></val><val></val><val></val><val></val><val>31</val></unassigned><tid><val href="562">562</val></tid><rank><val>species</val></rank><score><val>488.4</val><val>488.4</val><val>488.4</val><val>488.4</val><val>0</val><val>0</val><val>0</val><val>0</val><val>0</val><val>488.4</val></score></node></node></node></node></node></node></node></node></krona></div></body></html>

Mercurial > repos > iuc > recentrifuge

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