Mercurial > repos > iuc > recentrifuge

comparison test-data/kraken_test/test3_tsv.log @ 4:12f0968f171c draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/recentrifuge commit fbb5d7bb68cbb5f497cdda3c0697b21b046a8262
author iuc
date Thu, 25 Jan 2024 17:02:43 +0000
parents fe733f05c2f8
children
comparison
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3:b5407cc2bf51 4:12f0968f171c
1 1
2 =-= /home/pierre/anaconda3/envs/__recentrifuge@1.9.1/bin/rcf =-= v1.9.1 - Jun 2022 =-= by Jose Manuel Martí =-= 2 =-= /home/pierre/miniconda3/envs/__recentrifuge@1.13.2/bin/rcf =-= v1.13.2 - Jan 2024 =-= by Jose Manuel Martí =-=
3 3
4 CAUTION! --strain experimental mode activated! 4 CAUTION! --strain experimental mode activated!
5 Kraken .krk files to analyze: ['input_dir/kraken_out.krk'] 5 Kraken .krk files to analyze: ['input_dir/kraken_out.krk']
6 Loading NCBI nodes... OK!  6 Loading NCBI nodes... OK! 
7 Loading NCBI names... OK!  7 Loading NCBI names... OK! 
21  Check for more seqs lost ([in/ex]clude affects)...  21  Check for more seqs lost ([in/ex]clude affects)... 
22 Info: 90 additional seqs discarded (90.909% of accepted) 22 Info: 90 additional seqs discarded (90.909% of accepted)
23  23 
24 Warning! 11 orphan taxids (rerun with --debug for details) 24 Warning! 11 orphan taxids (rerun with --debug for details)
25 input_dir/kraken_out sample OK! 25 input_dir/kraken_out sample OK!
26 Load elapsed time: 0.00395 sec 26 Load elapsed time: 0.00424 sec
27  27 
28  28 
29 Building the taxonomy multiple tree... OK! 29 Building the taxonomy multiple tree... OK!
30 Generating tsv extra output ([output.rcf.]*.tsv)... OK! 30 Generating tsv extra output ([output.rcf.]*.tsv)... OK!
31 Total elapsed time: 00:00:00 31 Total elapsed time: 00:00:00