# HG changeset patch
# User iuc
# Date 1484321264 18000
# Node ID d7f1312b3455f37d674911ad26266735aa886e9a
# Parent  e5c7fffdc0783554b655f480163103850a320d4d
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/repmatch_gff3 commit 4eb5632ca7b54134911d40ae94eaf155dc673a71

diff -r e5c7fffdc078 -r d7f1312b3455 repmatch_gff3.xml
--- a/repmatch_gff3.xml	Tue Jul 26 06:10:53 2016 -0400
+++ b/repmatch_gff3.xml	Fri Jan 13 10:27:44 2017 -0500
@@ -1,10 +1,18 @@
 <?xml version="1.0"?>
-<tool id="repmatch_gff3" name="RepMatch" version="@WRAPPER_VERSION@.0">
+<tool id="repmatch_gff3" name="RepMatch" version="@WRAPPER_VERSION@.1">
     <description>Match paired peaks from two or more replicates</description>
     <macros>
         <import>repmatch_gff3_macros.xml</import>
     </macros>
     <expand macro="requirements" />
+    <stdio>
+        <!-- Anything other than zero is an error -->
+        <exit_code range=":-1" />
+        <exit_code range="1:" />
+        <!-- Check stderr in case the return code has not been set -->
+        <regex match="Error:" />
+        <regex match="Exception:" />
+    </stdio>
     <command>
         python $__tool_directory__/repmatch_gff3.py
         #for $i in $input:
diff -r e5c7fffdc078 -r d7f1312b3455 repmatch_gff3_macros.xml
--- a/repmatch_gff3_macros.xml	Tue Jul 26 06:10:53 2016 -0400
+++ b/repmatch_gff3_macros.xml	Fri Jan 13 10:27:44 2017 -0500
@@ -3,7 +3,7 @@
     <token name="@WRAPPER_VERSION@">1.0</token>
     <xml name="requirements">
         <requirements>
-            <requirement type="package" version="2.3.0">anaconda</requirement>
+            <requirement type="package" version="1.5.3">matplotlib</requirement>
         </requirements>
     </xml>
     <xml name="stdio">
diff -r e5c7fffdc078 -r d7f1312b3455 repmatch_gff3_util.pyc
Binary file repmatch_gff3_util.pyc has changed
diff -r e5c7fffdc078 -r d7f1312b3455 tool_dependencies.xml
--- a/tool_dependencies.xml	Tue Jul 26 06:10:53 2016 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,6 +0,0 @@
-<?xml version="1.0"?>
-<tool_dependency>
-    <package name="anaconda" version="2.3.0">
-        <repository changeset_revision="94d978ebbfd4" name="package_anaconda_2_3_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-    </package>
-</tool_dependency>