Mercurial > repos > iuc > rgcca
comparison macro.xml @ 0:067d45e6caa9 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgcca commit 00f9e92845737e05a4afb1c93043f35b7e4ea771"
author | iuc |
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date | Tue, 12 Jan 2021 10:12:04 +0000 |
parents | |
children | 4e73ea176c34 |
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-1:000000000000 | 0:067d45e6caa9 |
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1 <macros> | |
2 | |
3 <token name="@TOOL_VERSION@">3.0.0</token> | |
4 | |
5 <token name="@BLOCK_RULES@">1 corresponds to the first block, 2 corresponds to the second one, etc. This number should not be greater than the number of blocks selected.</token> | |
6 | |
7 <token name="@COMP_RULES@">This number should not be greater than the selected number of component (2, by default).</token> | |
8 | |
9 <xml name="output_tests" token_path="" token_compx="1" token_compy="2"> | |
10 <param name="output_selector" value="individuals,corcircle,top_variables,ave,design,individual_table,variable_table,rdata"/> | |
11 <output name="individual_plot" file="@PATH@/individuals.pdf" ftype="pdf"/> | |
12 <output name="top_variables" file="@PATH@/top_variables.pdf" ftype="pdf"/> | |
13 <output name="corcircle" file="@PATH@/corcircle.pdf" ftype="pdf"/> | |
14 <output name="ave" file="@PATH@/ave.pdf" ftype="pdf"/> | |
15 <output name="design" file="@PATH@/design.pdf" ftype="pdf"/> | |
16 <output name="rdata" file="@PATH@/rgcca.result.RData" compare="sim_size" delta="1000" ftype="rdata"/> | |
17 <output name="variable_table"> | |
18 <assert_contents> | |
19 <has_n_columns n="5"/> | |
20 <has_line_matching | |
21 expression='.*"cor.axis.@COMPX@"\s"cor.axis.@COMPY@"\s"weight.axis.@COMPX@"\s"weight.axis.@COMPY@".*\s"block"'/> | |
22 <has_line_matching | |
23 expression='^.+(\s\-?\d+.\d+){4}.+$'/> | |
24 </assert_contents> | |
25 </output> | |
26 </xml> | |
27 | |
28 <xml name="output_tests_3blocks"> | |
29 <param name="blocks" value="agriculture.tsv,industry.tsv,politic.tsv" ftype = "tsv"/> | |
30 <section name="analyse"> | |
31 <conditional name="tau"> | |
32 <param name="bool" value="false"/> | |
33 <param name="value" value="0.75"/> | |
34 </conditional> | |
35 <param name="scheme" value="4"/> | |
36 </section> | |
37 <assert_command> | |
38 <has_text text="--penalty 0.75"/> | |
39 <has_text text="--scheme 4"/> | |
40 </assert_command> | |
41 </xml> | |
42 | |
43 </macros> | |
44 |