comparison rg_rnaStar.xml @ 11:41929aa1e7f3 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 2911002ccd79fe062f6346ee5699ea262f92f04f"

10:d82339e37e8e

            </conditional>
            <conditional name="refGenomeSource">
                <param name="geneSource" value="indexed" />
                <conditional name="GTFconditional">
                    <param name="GTFselect" value="with-gtf" />
                    <param name="genomeDir" value="000" />
                </conditional>
            </conditional>
            <section name="oformat">
                <param name="outSAMattributes" value="NH,HI,AS,nM,NM,MD,jM,jI,MC,ch" />
                <param name="outSAMmapqUnique" value="255" />

            </conditional>
            <conditional name="refGenomeSource">
                <param name="geneSource" value="indexed" />
                <conditional name="GTFconditional">
                    <param name="GTFselect" value="without-gtf" />
                    <param name="genomeDir" value="001" />
                </conditional>
            </conditional>
            <conditional name="twopass">
                <param name="twopassMode" value="Basic" />
            </conditional>

11:41929aa1e7f3

            </conditional>
            <conditional name="refGenomeSource">
                <param name="geneSource" value="indexed" />
                <conditional name="GTFconditional">
                    <param name="GTFselect" value="with-gtf" />
                    <param name="genomeDir" value="001" />
                </conditional>
            </conditional>
            <section name="oformat">
                <param name="outSAMattributes" value="NH,HI,AS,nM,NM,MD,jM,jI,MC,ch" />
                <param name="outSAMmapqUnique" value="255" />

            </conditional>
            <conditional name="refGenomeSource">
                <param name="geneSource" value="indexed" />
                <conditional name="GTFconditional">
                    <param name="GTFselect" value="without-gtf" />
                    <param name="genomeDir" value="000" />
                </conditional>
            </conditional>
            <conditional name="twopass">
                <param name="twopassMode" value="Basic" />
            </conditional>