Mercurial > repos > iuc > rgrnastar
view test-data/test-cache/tophat-test/genomeParameters.txt @ 21:4074fc1940e2 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 1f8b01701c5b81d155617267a179ba42a0d4a307"
author | iuc |
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date | Fri, 10 Sep 2021 16:45:37 +0000 |
parents | 5ec75f5dae3c |
children |
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### STAR --runMode genomeGenerate --genomeDir tempstargenomedir --genomeFastaFiles tools/rgrnastar/test-data/tophat_test.fa --genomeSAindexNbases 5 ### GstrandBit 32 versionGenome 2.7.4a genomeType Full genomeFastaFiles tools/rgrnastar/test-data/tophat_test.fa genomeSAindexNbases 5 genomeChrBinNbits 18 genomeSAsparseD 1 genomeTransformType None genomeTransformVCF - sjdbOverhang 0 sjdbFileChrStartEnd - sjdbGTFfile - sjdbGTFchrPrefix - sjdbGTFfeatureExon exon sjdbGTFtagExonParentTranscript transcript_id sjdbGTFtagExonParentGene gene_id sjdbInsertSave Basic genomeFileSizes 262144 5366