Mercurial > repos > iuc > rna_starsolo

comparison test-data/rnastar_test_diploid.log @ 18:8dc4a444ec04 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 452556bcdcc3fe4e9ace07201be2365cd6f99e2f
author iuc
date Sun, 11 Feb 2024 00:02:30 +0000
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17:5ef7ec16b04f 18:8dc4a444ec04
1 Started job on | .*
2 Started mapping on | .*
3 Finished on | .*
4 Mapping speed, Million of reads per hour | inf
5
6 Number of input reads | 100
7 Average input read length | 75
8 UNIQUE READS:
9 Uniquely mapped reads number | 100
10 Uniquely mapped reads % | 100.00%
11 Average mapped length | 74.65
12 Number of splices: Total | 53
13 Number of splices: Annotated (sjdb) | 0
14 Number of splices: GT/AG | 53
15 Number of splices: GC/AG | 0
16 Number of splices: AT/AC | 0
17 Number of splices: Non-canonical | 0
18 Mismatch rate per base, % | 1.63%
19 Deletion rate per base | 0.00%
20 Deletion average length | 0.00
21 Insertion rate per base | 0.00%
22 Insertion average length | 0.00
23 MULTI-MAPPING READS:
24 Number of reads mapped to multiple loci | 0
25 % of reads mapped to multiple loci | 0.00%
26 Number of reads mapped to too many loci | 0
27 % of reads mapped to too many loci | 0.00%
28 UNMAPPED READS:
29 Number of reads unmapped: too many mismatches | 0
30 % of reads unmapped: too many mismatches | 0.00%
31 Number of reads unmapped: too short | 0
32 % of reads unmapped: too short | 0.00%
33 Number of reads unmapped: other | 0
34 % of reads unmapped: other | 0.00%
35 CHIMERIC READS:
36 Number of chimeric reads | 0
37 % of chimeric reads | 0.00%