Mercurial > repos > iuc > rna_starsolo

comparison test-data/rnastar_test_twopass.log @ 0:e3c94e2933c9 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 686574b0392e554b75035a9b79bc919dfda9ab97"
author iuc
date Thu, 15 Aug 2019 01:53:49 -0400
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-1:000000000000 0:e3c94e2933c9
1 Started job on | .*
2 Started mapping on | .*
3 Finished on | .*
4 Mapping speed, Million of reads per hour | .*
5
6 Number of input reads | 100
7 Average input read length | 75
8 UNIQUE READS:
9 Uniquely mapped reads number | 99
10 Uniquely mapped reads % | 99.00%
11 Average mapped length | 74.84
12 Number of splices: Total | 56
13 Number of splices: Annotated (sjdb) | 56
14 Number of splices: GT/AG | 56
15 Number of splices: GC/AG | 0
16 Number of splices: AT/AC | 0
17 Number of splices: Non-canonical | 0
18 Mismatch rate per base, % | 2.01%
19 Deletion rate per base | 0.00%
20 Deletion average length | 0.00
21 Insertion rate per base | 0.00%
22 Insertion average length | 0.00
23 MULTI-MAPPING READS:
24 Number of reads mapped to multiple loci | 1
25 % of reads mapped to multiple loci | 1.00%
26 Number of reads mapped to too many loci | 0
27 % of reads mapped to too many loci | 0.00%
28 UNMAPPED READS:
29 % of reads unmapped: too many mismatches | 0.00%
30 % of reads unmapped: too short | 0.00%
31 % of reads unmapped: other | 0.00%
32 CHIMERIC READS:
33 Number of chimeric reads | 0
34 % of chimeric reads | 0.00%