Mercurial > repos > iuc > rna_starsolo
changeset 16:13022c3d3076 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 7474e67190d0dcf2bd54c6b3cbfa30e54134c8a0
| author | iuc |
|---|---|
| date | Mon, 27 Mar 2023 16:38:01 +0000 |
| parents | b8f5f6e87f5c |
| children | 5ef7ec16b04f |
| files | macros.xml |
| diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/macros.xml Thu Mar 09 21:12:17 2023 +0000 +++ b/macros.xml Mon Mar 27 16:38:01 2023 +0000 @@ -5,7 +5,7 @@ the index versions in sync, but you should manually update @IDX_VERSION_SUFFIX@ --> <!-- STAR version to be used --> <token name="@TOOL_VERSION@">2.7.10b</token> - <token name="@VERSION_SUFFIX@">2</token> + <token name="@VERSION_SUFFIX@">3</token> <token name="@PROFILE@">21.01</token> <!-- STAR index version compatible with this version of STAR This is the STAR version that introduced the index structure expected @@ -309,7 +309,7 @@ <option value="read_5p">signal from only 5’ of the 1st read</option> <option value="read2">signal from only 2nd read</option> </param> - <param argument="--outWigStrand" type="boolean" truevalue="Stranded" falsevalue="Unstranded" checked="true" label="collapse strands (unstranded coverage)" help="By default, the strands are separated."/> + <param argument="--outWigStrand" type="boolean" truevalue="Stranded" falsevalue="Unstranded" checked="true" label="Generate a coverage for each strand (stranded coverage)"/> <param argument="--outWigReferencesPrefix" type="text" value="-" label="prefix matching reference name" help="For example, set 'chr' if you mapped on an ensembl genome but you want to display on UCSC"/> <param argument="--outWigNorm" type="boolean" truevalue="RPM" falsevalue="None" checked="true" label="Normalize coverage to million of mapped reads (RPM)"/> </xml>