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annotate test-data/reference.gtf @ 8:f73ab5187eed draft default tip

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planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit 140ef122cde10b77c9c9466cf8464c1bce6599e9
author iuc
date Fri, 30 Aug 2024 14:12:04 +0000
parents f89e3c318453
children
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f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
diff changeset
1 # stringtie /tmp/tmp3qb6tqs4/files/c/1/f/dataset_c1fd9ae0-5da1-47fe-a836-aebb9f0c8b87.dat -o /tmp/tmp3qb6tqs4/job_working_directory/000/9/outputs/galaxy_dataset_a1b533cb-fdd6-428d-8565-7686254dec8b.dat -p 1 -f 0.01 -m 200 -a 10 -j 1 -c 1 -g 50 -M 1.0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
diff changeset
2 # StringTie version 2.2.1
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
diff changeset
3 phiX174 StringTie transcript 17 5385 1000 . . gene_id "STRG.1"; transcript_id "STRG.1.1"; cov "12.758615"; FPKM "186254.437500"; TPM "1000000.062500";
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
diff changeset
4 phiX174 StringTie exon 17 5385 1000 . . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; cov "12.758615";