Mercurial > repos > iuc > rnaquast

annotate test-data/test_08_short_report.tab @ 8:f73ab5187eed draft default tip

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planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit 140ef122cde10b77c9c9466cf8464c1bce6599e9
author iuc
date Fri, 30 Aug 2024 14:12:04 +0000
parents 3125faf00ffd
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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7
3125faf00ffd planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit d68ebc953fe79f2909c79ef1b133300f450aa822
iuc
parents: 5
diff changeset
1 METRICS/TRANSCRIPTS transcriptome01 transcriptome_02
5
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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2 Genes 1 1
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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3 Avg. number of exons per isoform 1.0 1.0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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4 Transcripts 1 1
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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5 Transcripts > 500 bp 1 1
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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6 Transcripts > 1000 bp 1 1
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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7 Aligned 1 1
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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8 Uniquely aligned 0 0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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9 Multiply aligned 1 1
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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10 Unaligned 0 0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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11 Avg. aligned fraction 1.0 1.0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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12 Avg. alignment length 5369.0 5369.0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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13 Avg. mismatches per transcript 0.0 0.0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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14 Misassemblies 0 0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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15 Database coverage 1.0 1.0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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16 Duplication ratio 4.0 8.0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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17 Relative database coverage 0.0 0.0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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18 5000%-assembled genes 0 0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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19 9500%-assembled genes 0 0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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20 5000%-covered genes 0 0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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21 9500%-covered genes 0 0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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22 5000%-assembled isoforms 0 0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
diff changeset
23 9500%-assembled isoforms 0 0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
diff changeset
24 5000%-covered isoforms 0 0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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25 9500%-covered isoforms 0 0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
diff changeset
26 Mean isoform coverage 1.0 1.0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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27 Mean isoform assembly 1.0 1.0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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28 5000%-matched 0 0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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29 9500%-matched 0 0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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30 Unannotated 0 0
f89e3c318453 planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
iuc
parents:
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31 Mean fraction of transcript matched 1.0 1.0