comparison rna_quast.xml @ 6:8e66f695d859 draft default tip

planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit 7536270b3b51024e516b840728db6e6d0f903f69

5:f89e3c318453

                <assert_contents>
                    <has_text text="Transcripts" />
                    <has_size value="140" delta="5"/>
                </assert_contents>
            </output>
                        
        </test>
        <!-- Test 07: Transcriptome reference, annotation, mapping and BUSCO, additional outputs-->
        <test expect_num_outputs="4">
            <param name="transcripts" value="transcriptome01.fasta"/>
            <conditional name="gene_coordinates">

            </output_collection>
            <output name="short_report_pdf" file="test_07_short_report.pdf" ftype="pdf" compare="sim_size" delta="1000"/>
            <output name="short_report_tabular" file="test_07_short_report.tab" ftype="tabular"/>
            <output name="compressed_files" ftype="tgz">
                <assert_contents>
                    <has_size value="281260" delta="250"/>
                </assert_contents>
            </output>         
        </test>
        <!-- Test 08: Multiple inputs-->
        <test expect_num_outputs="6">

6:8e66f695d859

                <assert_contents>
                    <has_text text="Transcripts" />
                    <has_size value="140" delta="5"/>
                </assert_contents>
            </output>
        </test>
        <!-- Test 07: Transcriptome reference, annotation, mapping and BUSCO, additional outputs-->
        <test expect_num_outputs="4">
            <param name="transcripts" value="transcriptome01.fasta"/>
            <conditional name="gene_coordinates">

            </output_collection>
            <output name="short_report_pdf" file="test_07_short_report.pdf" ftype="pdf" compare="sim_size" delta="1000"/>
            <output name="short_report_tabular" file="test_07_short_report.tab" ftype="tabular"/>
            <output name="compressed_files" ftype="tgz">
                <assert_contents>
                    <has_archive_member path="./outputdir/.*" n="62" delta="0"/>
                    <has_archive_member path="./outputdir/logs/.*" n="10" delta="0"/>
                    <has_archive_member path="./outputdir/transcriptome01_output/.*" n="45" delta="0"/>
                </assert_contents>
            </output>         
        </test>
        <!-- Test 08: Multiple inputs-->
        <test expect_num_outputs="6">