Mercurial > repos > iuc > rnaquast

comparison test-data/test_08_short_report.tab @ 5:f89e3c318453 draft

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planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
author iuc
date Wed, 07 Jun 2023 12:02:03 +0000
parents
children 3125faf00ffd
comparison
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4:f9f2ad782d8f 5:f89e3c318453
1 METRICS/TRANSCRIPTS transcriptome01 transcriptome02
2 Genes 1 1
3 Avg. number of exons per isoform 1.0 1.0
4 Transcripts 1 1
5 Transcripts > 500 bp 1 1
6 Transcripts > 1000 bp 1 1
7 Aligned 1 1
8 Uniquely aligned 0 0
9 Multiply aligned 1 1
10 Unaligned 0 0
11 Avg. aligned fraction 1.0 1.0
12 Avg. alignment length 5369.0 5369.0
13 Avg. mismatches per transcript 0.0 0.0
14 Misassemblies 0 0
15 Database coverage 1.0 1.0
16 Duplication ratio 4.0 8.0
17 Relative database coverage 0.0 0.0
18 5000%-assembled genes 0 0
19 9500%-assembled genes 0 0
20 5000%-covered genes 0 0
21 9500%-covered genes 0 0
22 5000%-assembled isoforms 0 0
23 9500%-assembled isoforms 0 0
24 5000%-covered isoforms 0 0
25 9500%-covered isoforms 0 0
26 Mean isoform coverage 1.0 1.0
27 Mean isoform assembly 1.0 1.0
28 5000%-matched 0 0
29 9500%-matched 0 0
30 Unannotated 0 0
31 Mean fraction of transcript matched 1.0 1.0