Mercurial > repos > iuc > rnaquast
diff test-data/test_08_short_report.tab @ 5:f89e3c318453 draft
planemo upload for repository https://git.ufz.de/lehmanju/rnaquast commit c633f5c634128e3c81ab48e94df6f703dd005c46
| author | iuc |
|---|---|
| date | Wed, 07 Jun 2023 12:02:03 +0000 |
| parents | |
| children | 3125faf00ffd |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test_08_short_report.tab Wed Jun 07 12:02:03 2023 +0000 @@ -0,0 +1,31 @@ +METRICS/TRANSCRIPTS transcriptome01 transcriptome02 +Genes 1 1 +Avg. number of exons per isoform 1.0 1.0 +Transcripts 1 1 +Transcripts > 500 bp 1 1 +Transcripts > 1000 bp 1 1 +Aligned 1 1 +Uniquely aligned 0 0 +Multiply aligned 1 1 +Unaligned 0 0 +Avg. aligned fraction 1.0 1.0 +Avg. alignment length 5369.0 5369.0 +Avg. mismatches per transcript 0.0 0.0 +Misassemblies 0 0 +Database coverage 1.0 1.0 +Duplication ratio 4.0 8.0 +Relative database coverage 0.0 0.0 +5000%-assembled genes 0 0 +9500%-assembled genes 0 0 +5000%-covered genes 0 0 +9500%-covered genes 0 0 +5000%-assembled isoforms 0 0 +9500%-assembled isoforms 0 0 +5000%-covered isoforms 0 0 +9500%-covered isoforms 0 0 +Mean isoform coverage 1.0 1.0 +Mean isoform assembly 1.0 1.0 +5000%-matched 0 0 +9500%-matched 0 0 +Unannotated 0 0 +Mean fraction of transcript matched 1.0 1.0