comparison test-data/rnaspades-out1.fa @ 0:0d30fed9628b draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rnaspades commit 9bfb3d0e41daa3990a997b92438b9e56c2b6edbf
author iuc
date Tue, 13 Dec 2016 11:32:10 -0500
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:0d30fed9628b
1 >NODE_1_length_193_cov_2.51449
2 CATCACCAATTGTATTGGACCAATGTGACCTTGTCACTAGAGCTTGCGGGTTGTATTCAT
3 CATACTCCCTTAATCCGCAACTACGCAACTGTAAACTCCCGAAACATATATACCGTTTAA
4 AATATGATGTAACTGTTACCAAGTTCTTAAGTGATGTACCAGTGGCGACATTGCCCATAG
5 ATTTCATAGTTCC
6 >NODE_2_length_186_cov_2.1374
7 GTTCCAATTTCAATACTGCTCAATAATCCATTGTAGTTCACGACATGTAGAGCATCCAAT
8 TTGTTAATAAACTTGAGAATATTGGATCGAATCAACGACAGCATTTTTAGGCTCAATTGT
9 TCCTTGACACGTTGTGTTCGCATGTTGAAATGGTTAGTGTTGGTTGTTAGCAGCCAATCA
10 GAGATC
11 >NODE_3_length_181_cov_3.33333
12 TTCATATTGGGCTAACTCATATATGCTGACTCAATAGTTAACTTGACATCTCTGCCTTCA
13 TAATCAGATATATAAGCATAATAAATAAATACTCATATTTCTTGATAATTTGTTTAACCA
14 CAGATAAATCCTCACTGTAAGCCAGCTTCCAAGTTGACACCCTTACAAAAACCAGGACTC
15 A
16 >NODE_4_length_178_cov_2.80488
17 GCAGTTCGAACAGTGACTTGCTAATAAAACCATTTTTGGAAGCACGAGTAAATTTAAGTG
18 TTCAAGAAATACTTCAAATGACCCCTTCACATTACTCGGGAAATATTGTTCATAGGTACA
19 ACGATCAATACAGTCCTCATTCTTTCATGGCCAATCGTATGAGTATCTCAGCAACGCG
20 >NODE_5_length_156_cov_2.07921
21 CATGCCGTTTTACGAGTAACTTTGGTATTCGCCGTAGCCTCCATCATCGGGGTCAACTAC
22 CACATCGGGAATGGTCGTATCCTGTGAGTCAGTCGGATCATCATCTTGATGGCCAGGATT
23 GTCGTCATCATTGATGGGTCCTGGAAAGGGAATGTC
24 >NODE_6_length_153_cov_2
25 GTGGGCGTCCTCTCTCATATGAAGCTTCCATTTAAGAGTTGTCTGCACTCACTGTTTAAA
26 TTTCTATTGACTTTTTTACCAATGCTTTGTGTGTGTTAGGTTACAACTAAATTCTACCGG
27 TTTGCAGATCTGATTATTACAACTTAAGAAAAA
28 >NODE_7_length_153_cov_2.42857
29 GAACCGCAAGAAGCCTGGGCCGGCGAAATTTTCCCTCCTTCATGAGTCCACACTGAAAGC
30 ATTTACACAAGGGTCCTCGACACGAATGCAAAGTTTAATTCTTGAATTCAATAGCTCTCT
31 TGCTATCTAACTAAGATGGACTACTTCATATTG
32 >NODE_8_length_151_cov_2.125
33 TGAGTCCTCCTTTTAGAGGATTATTGTCATAAATCAATTCATTTTCTCGGTATCTTGTTA
34 AATCTAAATCCAATGTAGATGTGTATGTTAAGTACTGAGCTGGTACCTCCCGGGTGCAAC
35 ACTTAGTTAGATGAAGTTGAGCACGATTATA
36 >NODE_9_length_149_cov_2.54255
37 AACATAATACACTGGAGCTTCAAACATAGCCAATGTGATTCTAACTCCTTTAAACTCACA
38 GTTAATCATAAACAAGGTTTGACATCAATCTAGCTATATCTTTAAGAATGATAAACTTGA
39 TGAAGATTAAGAAAAAGGTAATCTGTCGA
40 >NODE_10_length_143_cov_2.55682
41 GTTTGTTTTTCGCACTTAGGGTGATAGTCCTACGTACAATCTGGCGCAGAAATGAAGTTA
42 AGTCTTGCGACCCAGGAACATTTAATCCGCTAGGATTTAGCACAAAGTCAATGGCAGTGC
43 AGTTCCCAGGGTTCTTCGCAATT
44 >NODE_11_length_137_cov_2.0122
45 CCAGCAGCGCCAGACGGGATTCGGGGCTTCCCCCGGTGCCGGTATGTGCACAAAGTATCA
46 GGAACGGGACCATGTGCCGGAGACTTTGCCTTCCACAAAGAGGGTGCTTTCTTCCTGTAT
47 GATCGACTTGCTTCCAC
48 >NODE_12_length_134_cov_2.05063
49 CTTCATATGAGAGAGGACGCCCCCGAGCTGCCAGACAGCATTCAAGGGATGGACACGACC
50 ACCATGTTCGAGCACGATCATCATCCAGAGAGAATTATCGAGGTGAGTACCGTCAATCAA
51 GGAGCGCCTCACAA
52 >NODE_13_length_133_cov_3.01282
53 ACGACAAACTAGTTTGTCGACATCACTAACCTGTAATGTACTATTGTGGATAACTCCAAG
54 CGGGATGGAAAATGTTCTTTGGAAAAGGATAATTACCCAAAGAAAGAATGATGTCCTCTT
55 GACTGGATCACGA
56 >NODE_14_length_132_cov_2.41558
57 GATGAAATTGCTGGCTGTACTCTTACATGTGTAAACAAGATTGTCGTGAGGATGTACATG
58 ATCATTTATGGTAGTTTTAAAAGCCTGGTGTCTTGATGAATCATGCACCAGCAGTTCTAC
59 GATCTGATGGAG
60 >NODE_15_length_129_cov_2.21622
61 CCTAAATGTAGAGCTTAACAAAAGACTCATAATATACCTGTTTTTAAAAGATTGATTGAT
62 GAAAGATCATGACTAATAACATTACAAACAATCCTACTATAATCAATACGGTGATTCAAA
63 TGTCAATCT
64 >NODE_16_length_128_cov_3.27397
65 TTATCTTGGTTGTTTAATTGACTTATATTATCTAGGGCTGATACTCACAAGTGTATCATT
66 AATGTAACATACCCTATAGTTCAGCAGTTGAAGCCTCTGCTATTAGTTGCCTCTTTCGGA
67 GGGAAAAG
68 >NODE_17_length_126_cov_2
69 GAAATCCAAGATACGAAATGGTTAATTGTAACTAAACCCGCAGGTCATGTGTGTTAGGTT
70 TCACAAATTATATATATTACTAACTCCATACTCGTAACTAACATTAGATAAGTAGGTGAA
71 GAAAAA
72 >NODE_18_length_124_cov_2.47826
73 TTTTTCCAAGGCTAACAGCTGAACATTATAGAAGATGACCTTATTCGACTGCCTCACTTA
74 TCTGGATGGGAGCTAGCTAAGACCATCATGCAATCAATTATTTCAGATAGCAATAATTCG
75 TCGA
76 >NODE_19_length_123_cov_2.13235
77 ATGGGAATTTTACCACCTTGACCATCCTCCACTTTTCTCAACCAAAATTATTAGTGACTT
78 AAGTATTTTTATAAAAGACAGAGCTACTGCAGTAGAAAGGACATGCTGGGATGCAGTATT
79 CGA
80 >NODE_20_length_121_cov_2.5
81 GTCTCTGCATCCATGGTTATAACCTCGACTTGCCTAGGTAGCCTTGCTCTTTGGTCTTTA
82 AACCAAGTAGGATTTGTTATGTCTGTTATTTGGCTTGCTGAGTTGTTAAGAATAATCTCA
83 A
84 >NODE_21_length_119_cov_2.1875
85 ATCATTCACTACCCTTTTCTTAACTTATCCCAAGATAGGACTTCTGTACAGTTTTGGGGC
86 CTTTGTAAGTTATTACCTTGGCAATACAATTCTTCGGACTAAGAAATTAACACTTGACA
87 >NODE_22_length_117_cov_2.12903
88 TCGTCGTCGGCATCGTCCAGTGGGTCTGCCTCTTCGTTGATTGGGGTCAGCATGCGAGGG
89 CTGGTTGAGCCGGAGGGTTCGTTTCTTCTGTCATTGTCCGTGAGTGGAGCACAGGCA
90 >NODE_23_length_113_cov_2.58621
91 TCCACAAAGAGGGTGCTTTCTTCCTGTATGATCGACTTGCTTCCACAGTTATCTACCGAG
92 GAACGACTTTCGCTGAAGGTGTCGTTGCATTTCTGATACTGCCCCAAGCTAAG
93 >NODE_24_length_113_cov_2.06897
94 GATGATGAAGGTTTTAATCTTCATCATTAGTTTTTTCTTAATTATAAAACGATCGTGTAA
95 ATGTTGGGCAGGCTAGTAGGTAAGTTATAAAAGCATAATGTAATTTAATTTAG
96 >NODE_25_length_112_cov_2.52632
97 ACCATCGACCATGCCAGCCACACACCAGGCAGTGTGTCATCAGCATTCATCCTCGAAGCT
98 ATGGTGAATGTCATATCGGGCCCCAAAGTGCTAATGAAGCAAATTCCAATTT
99 >NODE_26_length_111_cov_2.51786
100 AAGAGAAGTCAAGAACAAACCACCAGAGATCCACATGATGGCACTGAACGGAGTCTAGTC
101 CTGCAAATGAGCCATGAAATAAAAAGAACGACAATTCCACTAGAGAACACG
102 >NODE_27_length_110_cov_3.54545
103 GCCATGATGCTTGATGCAATAAGCTTTCTTTTTGTTCACGTTCCGTAACTACCATCATAT
104 TGCTAGGAAATGCTTTAGCAAGACCATCAGCTAACAGAGCTTCACAAAGT
105 >NODE_28_length_110_cov_2.30909
106 AGAGCGTCGTTCCAACAATCGAGCGCAAGGTTACAAGGTTGAACTGAGAGTGTCTAGACA
107 ACAAAATATCGATACTCCAGACACCAAGCAAGACCTGAGAAAAAACCATG
108 >NODE_29_length_109_cov_2.5
109 CTTTCCATTATCTTTAGTCTTCATCCTTGATTCTACAATCATGACAGTTGTCTTTAATGA
110 AAAAGGAAAAAAGCCTTTTTATTAAGTTGTAATAATCAGATCTGCAAAC
111 >NODE_30_length_107_cov_2.59615
112 ATTACCTTGTTGACACTGATCAAGACGGCAGAACACTGGGCGAGACAAGACATCCGAACC
113 ATAGAGGATTCCAAATTAAGGGCATTGTTAACTCTATGTGCTGTGAT
114 >NODE_31_length_107_cov_2.30769
115 ATCCTAGTTTCATTGATTTGAGGTTGAGTTTTGCCGTGAAACAATCTGAAGAAAGACTAA
116 AAGACAAATTTGCATATACAGAATAAAGCGATAACTGCAATTATAAC
117 >NODE_32_length_107_cov_2.09615
118 CCAAAATAAGCTTCACTAGAAGGATATTGTGAGGCGACAACACAATGGGTGTTACAGGAA
119 TATTGCAGTTACCTCGTGATCGATTCAAGAGGACATCATTCTTTCTT
120 >NODE_33_length_105_cov_2.7
121 ACCTTATTATTACTAGCCGTTTTTCAAAGTTCAATTTGAGTCTTAATGCAAATAAGCGTT
122 AAGCCACAGTTATAGCCATAATGGTAACTCAATATCTTAGCAAGC