Mercurial > repos > iuc > rnaspades

view test-data/rnaspades-out1.fa @ 1:9e58ff014088 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rnaspades commit a68a0ea372748c9d7ed2c96116b7b7c4c7585af4
author iuc
date Tue, 28 Mar 2017 10:53:20 -0400
parents 0d30fed9628b
children
line wrap: on
line source

>NODE_1_length_193_cov_2.51449
CATCACCAATTGTATTGGACCAATGTGACCTTGTCACTAGAGCTTGCGGGTTGTATTCAT
CATACTCCCTTAATCCGCAACTACGCAACTGTAAACTCCCGAAACATATATACCGTTTAA
AATATGATGTAACTGTTACCAAGTTCTTAAGTGATGTACCAGTGGCGACATTGCCCATAG
ATTTCATAGTTCC
>NODE_2_length_186_cov_2.1374
GTTCCAATTTCAATACTGCTCAATAATCCATTGTAGTTCACGACATGTAGAGCATCCAAT
TTGTTAATAAACTTGAGAATATTGGATCGAATCAACGACAGCATTTTTAGGCTCAATTGT
TCCTTGACACGTTGTGTTCGCATGTTGAAATGGTTAGTGTTGGTTGTTAGCAGCCAATCA
GAGATC
>NODE_3_length_181_cov_3.33333
TTCATATTGGGCTAACTCATATATGCTGACTCAATAGTTAACTTGACATCTCTGCCTTCA
TAATCAGATATATAAGCATAATAAATAAATACTCATATTTCTTGATAATTTGTTTAACCA
CAGATAAATCCTCACTGTAAGCCAGCTTCCAAGTTGACACCCTTACAAAAACCAGGACTC
A
>NODE_4_length_178_cov_2.80488
GCAGTTCGAACAGTGACTTGCTAATAAAACCATTTTTGGAAGCACGAGTAAATTTAAGTG
TTCAAGAAATACTTCAAATGACCCCTTCACATTACTCGGGAAATATTGTTCATAGGTACA
ACGATCAATACAGTCCTCATTCTTTCATGGCCAATCGTATGAGTATCTCAGCAACGCG
>NODE_5_length_156_cov_2.07921
CATGCCGTTTTACGAGTAACTTTGGTATTCGCCGTAGCCTCCATCATCGGGGTCAACTAC
CACATCGGGAATGGTCGTATCCTGTGAGTCAGTCGGATCATCATCTTGATGGCCAGGATT
GTCGTCATCATTGATGGGTCCTGGAAAGGGAATGTC
>NODE_6_length_153_cov_2
GTGGGCGTCCTCTCTCATATGAAGCTTCCATTTAAGAGTTGTCTGCACTCACTGTTTAAA
TTTCTATTGACTTTTTTACCAATGCTTTGTGTGTGTTAGGTTACAACTAAATTCTACCGG
TTTGCAGATCTGATTATTACAACTTAAGAAAAA
>NODE_7_length_153_cov_2.42857
GAACCGCAAGAAGCCTGGGCCGGCGAAATTTTCCCTCCTTCATGAGTCCACACTGAAAGC
ATTTACACAAGGGTCCTCGACACGAATGCAAAGTTTAATTCTTGAATTCAATAGCTCTCT
TGCTATCTAACTAAGATGGACTACTTCATATTG
>NODE_8_length_151_cov_2.125
TGAGTCCTCCTTTTAGAGGATTATTGTCATAAATCAATTCATTTTCTCGGTATCTTGTTA
AATCTAAATCCAATGTAGATGTGTATGTTAAGTACTGAGCTGGTACCTCCCGGGTGCAAC
ACTTAGTTAGATGAAGTTGAGCACGATTATA
>NODE_9_length_149_cov_2.54255
AACATAATACACTGGAGCTTCAAACATAGCCAATGTGATTCTAACTCCTTTAAACTCACA
GTTAATCATAAACAAGGTTTGACATCAATCTAGCTATATCTTTAAGAATGATAAACTTGA
TGAAGATTAAGAAAAAGGTAATCTGTCGA
>NODE_10_length_143_cov_2.55682
GTTTGTTTTTCGCACTTAGGGTGATAGTCCTACGTACAATCTGGCGCAGAAATGAAGTTA
AGTCTTGCGACCCAGGAACATTTAATCCGCTAGGATTTAGCACAAAGTCAATGGCAGTGC
AGTTCCCAGGGTTCTTCGCAATT
>NODE_11_length_137_cov_2.0122
CCAGCAGCGCCAGACGGGATTCGGGGCTTCCCCCGGTGCCGGTATGTGCACAAAGTATCA
GGAACGGGACCATGTGCCGGAGACTTTGCCTTCCACAAAGAGGGTGCTTTCTTCCTGTAT
GATCGACTTGCTTCCAC
>NODE_12_length_134_cov_2.05063
CTTCATATGAGAGAGGACGCCCCCGAGCTGCCAGACAGCATTCAAGGGATGGACACGACC
ACCATGTTCGAGCACGATCATCATCCAGAGAGAATTATCGAGGTGAGTACCGTCAATCAA
GGAGCGCCTCACAA
>NODE_13_length_133_cov_3.01282
ACGACAAACTAGTTTGTCGACATCACTAACCTGTAATGTACTATTGTGGATAACTCCAAG
CGGGATGGAAAATGTTCTTTGGAAAAGGATAATTACCCAAAGAAAGAATGATGTCCTCTT
GACTGGATCACGA
>NODE_14_length_132_cov_2.41558
GATGAAATTGCTGGCTGTACTCTTACATGTGTAAACAAGATTGTCGTGAGGATGTACATG
ATCATTTATGGTAGTTTTAAAAGCCTGGTGTCTTGATGAATCATGCACCAGCAGTTCTAC
GATCTGATGGAG
>NODE_15_length_129_cov_2.21622
CCTAAATGTAGAGCTTAACAAAAGACTCATAATATACCTGTTTTTAAAAGATTGATTGAT
GAAAGATCATGACTAATAACATTACAAACAATCCTACTATAATCAATACGGTGATTCAAA
TGTCAATCT
>NODE_16_length_128_cov_3.27397
TTATCTTGGTTGTTTAATTGACTTATATTATCTAGGGCTGATACTCACAAGTGTATCATT
AATGTAACATACCCTATAGTTCAGCAGTTGAAGCCTCTGCTATTAGTTGCCTCTTTCGGA
GGGAAAAG
>NODE_17_length_126_cov_2
GAAATCCAAGATACGAAATGGTTAATTGTAACTAAACCCGCAGGTCATGTGTGTTAGGTT
TCACAAATTATATATATTACTAACTCCATACTCGTAACTAACATTAGATAAGTAGGTGAA
GAAAAA
>NODE_18_length_124_cov_2.47826
TTTTTCCAAGGCTAACAGCTGAACATTATAGAAGATGACCTTATTCGACTGCCTCACTTA
TCTGGATGGGAGCTAGCTAAGACCATCATGCAATCAATTATTTCAGATAGCAATAATTCG
TCGA
>NODE_19_length_123_cov_2.13235
ATGGGAATTTTACCACCTTGACCATCCTCCACTTTTCTCAACCAAAATTATTAGTGACTT
AAGTATTTTTATAAAAGACAGAGCTACTGCAGTAGAAAGGACATGCTGGGATGCAGTATT
CGA
>NODE_20_length_121_cov_2.5
GTCTCTGCATCCATGGTTATAACCTCGACTTGCCTAGGTAGCCTTGCTCTTTGGTCTTTA
AACCAAGTAGGATTTGTTATGTCTGTTATTTGGCTTGCTGAGTTGTTAAGAATAATCTCA
A
>NODE_21_length_119_cov_2.1875
ATCATTCACTACCCTTTTCTTAACTTATCCCAAGATAGGACTTCTGTACAGTTTTGGGGC
CTTTGTAAGTTATTACCTTGGCAATACAATTCTTCGGACTAAGAAATTAACACTTGACA
>NODE_22_length_117_cov_2.12903
TCGTCGTCGGCATCGTCCAGTGGGTCTGCCTCTTCGTTGATTGGGGTCAGCATGCGAGGG
CTGGTTGAGCCGGAGGGTTCGTTTCTTCTGTCATTGTCCGTGAGTGGAGCACAGGCA
>NODE_23_length_113_cov_2.58621
TCCACAAAGAGGGTGCTTTCTTCCTGTATGATCGACTTGCTTCCACAGTTATCTACCGAG
GAACGACTTTCGCTGAAGGTGTCGTTGCATTTCTGATACTGCCCCAAGCTAAG
>NODE_24_length_113_cov_2.06897
GATGATGAAGGTTTTAATCTTCATCATTAGTTTTTTCTTAATTATAAAACGATCGTGTAA
ATGTTGGGCAGGCTAGTAGGTAAGTTATAAAAGCATAATGTAATTTAATTTAG
>NODE_25_length_112_cov_2.52632
ACCATCGACCATGCCAGCCACACACCAGGCAGTGTGTCATCAGCATTCATCCTCGAAGCT
ATGGTGAATGTCATATCGGGCCCCAAAGTGCTAATGAAGCAAATTCCAATTT
>NODE_26_length_111_cov_2.51786
AAGAGAAGTCAAGAACAAACCACCAGAGATCCACATGATGGCACTGAACGGAGTCTAGTC
CTGCAAATGAGCCATGAAATAAAAAGAACGACAATTCCACTAGAGAACACG
>NODE_27_length_110_cov_3.54545
GCCATGATGCTTGATGCAATAAGCTTTCTTTTTGTTCACGTTCCGTAACTACCATCATAT
TGCTAGGAAATGCTTTAGCAAGACCATCAGCTAACAGAGCTTCACAAAGT
>NODE_28_length_110_cov_2.30909
AGAGCGTCGTTCCAACAATCGAGCGCAAGGTTACAAGGTTGAACTGAGAGTGTCTAGACA
ACAAAATATCGATACTCCAGACACCAAGCAAGACCTGAGAAAAAACCATG
>NODE_29_length_109_cov_2.5
CTTTCCATTATCTTTAGTCTTCATCCTTGATTCTACAATCATGACAGTTGTCTTTAATGA
AAAAGGAAAAAAGCCTTTTTATTAAGTTGTAATAATCAGATCTGCAAAC
>NODE_30_length_107_cov_2.59615
ATTACCTTGTTGACACTGATCAAGACGGCAGAACACTGGGCGAGACAAGACATCCGAACC
ATAGAGGATTCCAAATTAAGGGCATTGTTAACTCTATGTGCTGTGAT
>NODE_31_length_107_cov_2.30769
ATCCTAGTTTCATTGATTTGAGGTTGAGTTTTGCCGTGAAACAATCTGAAGAAAGACTAA
AAGACAAATTTGCATATACAGAATAAAGCGATAACTGCAATTATAAC
>NODE_32_length_107_cov_2.09615
CCAAAATAAGCTTCACTAGAAGGATATTGTGAGGCGACAACACAATGGGTGTTACAGGAA
TATTGCAGTTACCTCGTGATCGATTCAAGAGGACATCATTCTTTCTT
>NODE_33_length_105_cov_2.7
ACCTTATTATTACTAGCCGTTTTTCAAAGTTCAATTTGAGTCTTAATGCAAATAAGCGTT
AAGCCACAGTTATAGCCATAATGGTAACTCAATATCTTAGCAAGC