Mercurial > repos > iuc > samtools_bam_to_cram

changeset 6:0b663ca9a961 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/bam_to_cram commit 5cb103832529f17e5c72e7f122758c13519fbe5e
author iuc
date Mon, 15 Aug 2022 09:14:16 +0000
parents c2eda9a95b01
children b9ea85dfaf45
files macros.xml samtools_bam_to_cram.xml
diffstat 2 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/macros.xml	Sat Nov 27 12:31:16 2021 +0000
+++ b/macros.xml	Mon Aug 15 09:14:16 2022 +0000
@@ -5,7 +5,7 @@
             <yield/>
         </requirements>
     </xml>
-    <token name="@TOOL_VERSION@">1.13</token>
+    <token name="@TOOL_VERSION@">1.15.1</token>
     <token name="@PROFILE@">20.05</token>
     <token name="@FLAGS@"><![CDATA[
         #set $flags = 0
@@ -103,7 +103,7 @@
         #end if
     ]]></token>
 
-    <xml name="optional_reference">
+    <xml name="optional_reference" token_help="" token_argument="">
         <conditional name="addref_cond">
             <param name="addref_select" type="select" label="Use a reference sequence">
                 <help>@HELP@</help>
--- a/samtools_bam_to_cram.xml	Sat Nov 27 12:31:16 2021 +0000
+++ b/samtools_bam_to_cram.xml	Mon Aug 15 09:14:16 2022 +0000
@@ -1,4 +1,4 @@
-<tool id="samtools_bam_to_cram" name="samtools BAM to CRAM" version="@TOOL_VERSION@" profile="@PROFILE@">
+<tool id="samtools_bam_to_cram" name="samtools BAM to CRAM" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@">
     <description>convert BAM alignments to CRAM format</description>
 
     <macros>