# HG changeset patch
# User iuc
# Date 1762952406 0
# Node ID 74e06ecd1f83bd918a030920c22bcbbf0a159a5e
# Parent  8feff76651815d2f90bb19c0d89a323749f93d61
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tool_collections/samtools/samtools_consensus commit 19dd8b645a77899ff98d139d79de824a23f416bb

diff -r 8feff7665181 -r 74e06ecd1f83 samtools_consensus.xml
--- a/samtools_consensus.xml	Wed Nov 12 12:51:35 2025 +0000
+++ b/samtools_consensus.xml	Wed Nov 12 13:00:06 2025 +0000
@@ -140,9 +140,9 @@
             <param name="minimum_depth" argument="--min-depth" type="integer" value="1" label="Minimum depth" help="The minimum depth required to make a call. Failing this depth check will produce consensus 'N', or absent if it is an insertion. Note this check is performed after filtering by flags and mapping/base quality"/>
             <!-- region -->
             <repeat name="reg_repeat" title="region" min="0" max="1">
-                <param name="reg" type="text" optional="false" format="fasta" label="Region"/>
-                <param name="start" type="integer" format="fasta" optional="true" label="Start"/>
-                <param name="end" type="integer" format="fasta" optional="true" label="End"/>
+                <param name="reg" type="text" optional="false" label="Region"/>
+                <param name="start" type="integer" optional="true" label="Start"/>
+                <param name="end" type="integer" optional="true" label="End"/>
             </repeat>
             <!-- use contional ref macro -->
              <expand macro="optional_reference" token_argument="--reference" token_help="Select a reference genome to guide consensus generation."/>