comparison test-data/11.2.fq.expected @ 2:720217c23995 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fastx commit 0f75269223c0821c6c82acf98fde947d0f816f2b"

2:720217c23995

@ref1_grp1_p001/2 2:N:0:AC+GT	MD:Z:10	RG:Z:grp1	BC:Z:AC-GT
GTCGACTCTA
+
----------
@ref1_grp1_p002/2 2:N:0:AATT+CCGG	MD:Z:10	RG:Z:grp1	BC:Z:AATT+CCGG
GCAGGTCGAC
+
//////////
@ref1_grp1_p003/2 2:N:0:0	MD:Z:10	RG:Z:grp1
GCCTGCAGGT
+
1111111111
@ref1_grp1_p004/2 2:N:0:0	MD:Z:10	RG:Z:grp1
GCATGCCTGC
+
3333333333
@ref1_grp1_p005/2 2:N:0:0	MD:Z:10	RG:Z:grp1
GCTTGCATGC
+
5555555555
@ref1_grp1_p006/2 2:N:0:0	MD:Z:10	RG:Z:grp1
TCAAGCTTGC
+
7777777777
@ref1_grp2_p001/2 2:N:0:TG+CA	MD:Z:10	RG:Z:grp2	BC:Z:TG+CA	QT:Z:ab+cd
AGGTCGACTC
+
..........
@ref1_grp2_p002/2 2:N:0:0	MD:Z:10	RG:Z:grp2
CTGCAGGTCG
+
0000000000
@ref1_grp2_p003/2 2:N:0:0	MD:Z:10	RG:Z:grp2
ATGCCTGCAG
+
2222222222
@ref1_grp2_p004/2 2:N:0:0	MD:Z:10	RG:Z:grp2
TTGCATGCCT
+
4444444444
@ref1_grp2_p005/2 2:N:0:0	MD:Z:10	RG:Z:grp2
AAGCTTGCAT
+
6666666666
@ref1_grp2_p006/2 2:N:0:0	MD:Z:10	RG:Z:grp2
ACTCAAGCTT
+
8888888888
@ref2_grp3_p001/2 2:N:0:0	MD:Z:0T0A0A1C0A0T0G0G0T0C0A1A0G0	RG:Z:grp3
CTGTTTCCTGTGTGA
+
|||||||||||||||
@ref2_grp3_p002/2 2:N:0:0	MD:Z:15	RG:Z:grp3
CGCCAAGCTATTTAG
+
}}}}}}}}}}}}}}}
@ref2_grp3_p003/2 2:N:0:0	MD:Z:0A0T0T0C0T0A0T0A0G0T0G0T1A0C0	RG:Z:grp3
ACGTMRWSYKVHDBN
+
0123456789abcd!
@ref12_grp1_p001/2 2:N:0:0	MD:Z:10	RG:Z:grp1
CACTATAGAA
+
BBBBBBBBBB
@ref12_grp2_p001/2 2:N:0:0	MD:Z:10	RG:Z:grp2
ATTTAGGTGA
+
BBBBBBBBBB