# HG changeset patch # User iuc # Date 1538123959 14400 # Node ID a8d69aee190e2d021b03b1f79c63997974d1fdb2 # Parent a0d039fa9771eb0f4f8aadf18fae79e316dc875e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fastx commit 60257e09a1aadf54bb2f06cbe1e88db6fd835e83 diff -r a0d039fa9771 -r a8d69aee190e macros.xml --- a/macros.xml Mon Mar 12 12:53:10 2018 -0400 +++ b/macros.xml Fri Sep 28 04:39:19 2018 -0400 @@ -1,26 +1,131 @@ - samtools + samtools - 1.3.1 + 1.9 #set $flags = sum(map(int, str($filter).split(','))) - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + ^[^\s'\":]+(:\d+(-\d+){0,1}){0,1}$ + + + + + + + + + @@ -64,21 +169,4 @@ - ------ - -.. class:: warningmark - -**No options available? How to re-detect metadata** - -If you see a "No options available" within the "**Select references (chromosomes and contigs) you would like to restrict bam to**" drop down, you need to re-detect metadata for the dataset you are trying to process. To do this follow these steps: - -1. Click on the **pencil** icon adjacent to the dataset in the history -2. A new menu will appear in the center pane of the interface -3. Click **Datatype** tab -4. Set **New Type** to **BAM** -5. Click **Save** - -The medatada will be re-detected and you will be able to see the list of reference sequences in the "**Select references (chromosomes and contigs) you would like to restrict bam to**" drop-down. - diff -r a0d039fa9771 -r a8d69aee190e samtools_fastx.xml --- a/samtools_fastx.xml Mon Mar 12 12:53:10 2018 -0400 +++ b/samtools_fastx.xml Fri Sep 28 04:39:19 2018 -0400 @@ -1,104 +1,515 @@ - - - FASTA or FASTQ from a SAM file + + extract FASTA or FASTQ from alignment files macros.xml + - - input && +#else: + ln -s '$input' input && +#end if + +#set command=str($output_fmt_cond.output_fmt_select)[:5] + +samtools $command +#if str($output_fmt_cond.output_fmt_select).startswith('fastq'): + #if str($output_fmt_cond.default_quality) != '': + -v $output_fmt_cond.default_quality + #end if + $output_fmt_cond.output_quality + $output_fmt_cond.ilumina_casava +#end if +$copy_tags +#if str($copy_arb_tags) != '': + -T '$copy_arb_tags' +#end if +$read_numbering +#if 'r0' in str($outputs): + -0 nonspecific.$output_fmt_cond.output_fmt_select +#end if +#if 'r1' in str($outputs): + -1 forward.$output_fmt_cond.output_fmt_select +#end if +#if 'r2' in str($outputs): + -2 reverse.$output_fmt_cond.output_fmt_select +#end if +#if str($inclusive_filter) != 'None': + #set $filter = $inclusive_filter + @FLAGS@ + -f $flags +#end if +#if str($exclusive_filter) != 'None': + #set $filter = $exclusive_filter + @FLAGS@ + -F $flags +#end if +#if str($exclusive_filter) != 'None': + #set $filter = $exclusive_filter_all + @FLAGS@ + -G $flags +#end if +#if 's' in str($outputs): + -s singletons.$output_fmt_cond.output_fmt_select +#end if +#if str($idxout_cond.idxout_select) == 'yes': + #if str($idxout_cond.write1st) == 'yes': + --i1 i1.$output_fmt_cond.output_fmt_select + #end if + #if str($idxout_cond.write2nd) == 'yes': + --i2 i2.$output_fmt_cond.output_fmt_select + #end if + #if str($idxout_cond.index_format) != '': + --index-format $idxout_cond.index_format + #end if + #if str($idxout_cond.barcode_tag) != '': + --barcode-tag $idxout_cond.barcode_tag + #end if + #if str($idxout_cond.quality_tag) != '': + --quality-tag $idxout_cond.quality_tag + #end if +#end if + +input + +#if str($outputs)=='None' or 'other' in str($outputs): + ## since currently stdout in not zipped (samtools doesn't know about the extension) + #if str($output_fmt_cond.output_fmt_select).endswith('.gz'): + | gzip - + #end if + > output.$output_fmt_cond.output_fmt_select + && ln -s output.$output_fmt_cond.output_fmt_select output +#else + ## otherwise the remaining sequences would show up in the datasets info box + > /dev/null +#end if +#if 'r0' in str($outputs): + && ln -s nonspecific.$output_fmt_cond.output_fmt_select nonspecific +#end if +#if 'r1' in str($outputs): + && ln -s forward.$output_fmt_cond.output_fmt_select forward +#end if +#if 'r2' in str($outputs): + && ln -s reverse.$output_fmt_cond.output_fmt_select reverse +#end if +#if 's' in str($outputs): + && ln -s singletons.$output_fmt_cond.output_fmt_select singletons +#end if +#if str($idxout_cond.idxout_select) == 'yes': + #if str($idxout_cond.write1st) == 'yes': + && ln -s i1.$output_fmt_cond.output_fmt_select i1 + #end if + #if str($idxout_cond.write2nd) == 'yes': + && ln -s i2.$output_fmt_cond.output_fmt_select i2 + #end if +#end if ]]> - - - - - - - - - - - - - - + + + + + + + - - - + + + + + + + + + + + + + + + + + + disjoint subsets of the reads can be redirected to separate data sets. "READ[12]" are reads for which the READ[12] flag is set and the READ[21] flag is not set. "unspecific" reads are those for which both ore neither of these flags are set. "singletons" are the singleto reads. Note that if selected READ1 and READ2 contain only the paired reads. "other" are the remaining reads. If onlz 'others' or nothing is selected all reads go to a single data set. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +The index-format string describes how to parse the barcode and quality tags, for example: + i14i8 the first 14 characters are index 1, the next 8 characters are index 2 + n8i14 ignore the first 8 characters, and use the next 14 characters for index 1 + If the tag contains a separator, then the numeric part can be replaced with '*' to mean + 'read until the separator or end of tag', for example: + n*i* ignore the left part of the tag until the separator, then use the second part + of the tag as index 1 + + + + + - - - - + + 'r0' in str(outputs) + + + + + + + 'r1' in str(outputs) + + + + + + + 'r2' in str(outputs) + + + + - - - - + + 's' in str(outputs) + + + + + + + str(outputs)=='None' or 'other' in str(outputs) + + + + - - - - + + idxout_cond['idxout_select']=='yes' and idxout_cond['write1st'] + + + + + + + idxout_cond['idxout_select']=='yes' and idxout_cond['write2nd'] + + + + + - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - - - - + + + + + + + - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - - `_ to extract sequences from a SAM or BAM file in FASTA or FASTQ format. - ]]> + `_ to extract sequences from a +SAM or BAM file in FASTA or FASTQ format. + ]]> diff -r a0d039fa9771 -r a8d69aee190e test-data/1.1.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/1.1.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,72 @@ +@ref1_grp1_p001 +CGAGCTCGGT ++ +!!!!!!!!!! +@ref1_grp1_p002 +CTCGGTACCC ++ +########## +@ref1_grp1_p003 +GTACCCGGGG ++ +%%%%%%%%%% +@ref1_grp1_p004 +CCGGGGATCC ++ +'''''''''' +@ref1_grp1_p005 +GGATCCTCTA ++ +)))))))))) +@ref1_grp1_p006 +CCTCTAGAGT ++ +++++++++++ +@ref1_grp2_p001 +AGCTCGGTAC ++ +"""""""""" +@ref1_grp2_p002 +CGGTACCCGG ++ +$$$$$$$$$$ +@ref1_grp2_p003 +ACCCGGGGAT ++ +&&&&&&&&&& +@ref1_grp2_p004 +GGGGATCCTC ++ +(((((((((( +@ref1_grp2_p005 +ATCCTCTAGA ++ +********** +@ref1_grp2_p006 +TCTAGAGTCG ++ +,,,,,,,,,, +@ref2_grp3_p001 +GTGACACTATAGAAT ++ +~~~~~~~~~~~~~~~ +@ref2_grp3_p002 +CTGTTTCCTGTGTGA ++ +{{{{{{{{{{{{{{{ +@ref2_grp3_p003 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001 +TGCAGGCATG ++ +AAAAAAAAAA +@ref12_grp2_p001 +CAAGCTTGAG ++ +AAAAAAAAAA +@unaligned_grp3_p001 +CACTCGTTCATGACG ++ +0123456789abcde diff -r a0d039fa9771 -r a8d69aee190e test-data/1.2.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/1.2.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,72 @@ +@ref1_grp1_p001 +GTCGACTCTA ++ +---------- +@ref1_grp1_p002 +GCAGGTCGAC ++ +////////// +@ref1_grp1_p003 +GCCTGCAGGT ++ +1111111111 +@ref1_grp1_p004 +GCATGCCTGC ++ +3333333333 +@ref1_grp1_p005 +GCTTGCATGC ++ +5555555555 +@ref1_grp1_p006 +TCAAGCTTGC ++ +7777777777 +@ref1_grp2_p001 +AGGTCGACTC ++ +.......... +@ref1_grp2_p002 +CTGCAGGTCG ++ +0000000000 +@ref1_grp2_p003 +ATGCCTGCAG ++ +2222222222 +@ref1_grp2_p004 +TTGCATGCCT ++ +4444444444 +@ref1_grp2_p005 +AAGCTTGCAT ++ +6666666666 +@ref1_grp2_p006 +ACTCAAGCTT ++ +8888888888 +@ref2_grp3_p001 +CTGTTTCCTGTGTGA ++ +||||||||||||||| +@ref2_grp3_p002 +CGCCAAGCTATTTAG ++ +}}}}}}}}}}}}}}} +@ref2_grp3_p003 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001 +CACTATAGAA ++ +BBBBBBBBBB +@ref12_grp2_p001 +ATTTAGGTGA ++ +BBBBBBBBBB +@unaligned_grp3_p001 +GAAAGTGAGGAGGTG ++ +edcba9876543210 diff -r a0d039fa9771 -r a8d69aee190e test-data/1.stdout.expected diff -r a0d039fa9771 -r a8d69aee190e test-data/10.1.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/10.1.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,68 @@ +@ref1_grp1_p001 +CGAGCTCGGT ++ +!!!!!!!!!! +@ref1_grp1_p002 +CTCGGTACCC ++ +########## +@ref1_grp1_p003 +GTACCCGGGG ++ +%%%%%%%%%% +@ref1_grp1_p004 +CCGGGGATCC ++ +'''''''''' +@ref1_grp1_p005 +GGATCCTCTA ++ +)))))))))) +@ref1_grp1_p006 +CCTCTAGAGT ++ +++++++++++ +@ref1_grp2_p001 +AGCTCGGTAC ++ +"""""""""" +@ref1_grp2_p002 +CGGTACCCGG ++ +$$$$$$$$$$ +@ref1_grp2_p003 +ACCCGGGGAT ++ +&&&&&&&&&& +@ref1_grp2_p004 +GGGGATCCTC ++ +(((((((((( +@ref1_grp2_p005 +ATCCTCTAGA ++ +********** +@ref1_grp2_p006 +TCTAGAGTCG ++ +1111111111 +@ref2_grp3_p001 +GTGACACTATAGAAT ++ +~~~~~~~~~~~~~~~ +@ref2_grp3_p002 +CTGTTTCCTGTGTGA ++ +{{{{{{{{{{{{{{{ +@ref2_grp3_p003 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001 +TGCAGGCATG ++ +AAAAAAAAAA +@ref12_grp2_p001 +CAAGCTTGAG ++ +AAAAAAAAAA diff -r a0d039fa9771 -r a8d69aee190e test-data/10.2.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/10.2.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,68 @@ +@ref1_grp1_p001 +GTCGACTCTA ++ +---------- +@ref1_grp1_p002 +GCAGGTCGAC ++ +////////// +@ref1_grp1_p003 +GCCTGCAGGT ++ +1111111111 +@ref1_grp1_p004 +GCATGCCTGC ++ +3333333333 +@ref1_grp1_p005 +GCTTGCATGC ++ +5555555555 +@ref1_grp1_p006 +TCAAGCTTGC ++ +7777777777 +@ref1_grp2_p001 +AGGTCGACTC ++ +.......... +@ref1_grp2_p002 +CTGCAGGTCG ++ +0000000000 +@ref1_grp2_p003 +ATGCCTGCAG ++ +2222222222 +@ref1_grp2_p004 +TTGCATGCCT ++ +9999999999 +@ref1_grp2_p005 +AAGCTTGCAT ++ +6666666666 +@ref1_grp2_p006 +ACTCAAGCTT ++ +8888888888 +@ref2_grp3_p001 +CTGTTTCCTGTGTGA ++ +||||||||||||||| +@ref2_grp3_p002 +CGCCAAGCTATTTAG ++ +}}}}}}}}}}}}}}} +@ref2_grp3_p003 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001 +CACTATAGAA ++ +BBBBBBBBBB +@ref12_grp2_p001 +ATTTAGGTGA ++ +BBBBBBBBBB diff -r a0d039fa9771 -r a8d69aee190e test-data/10.s.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/10.s.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,8 @@ +@ref1_grp2_p002a +CGGTACCCGG ++ +$$$$$$$$$$ +@unaligned_grp3_p001 +CACTCGTTCATGACG ++ +0123456789abcde diff -r a0d039fa9771 -r a8d69aee190e test-data/2.1.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/2.1.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,72 @@ +@ref1_grp1_p001 +CGAGCTCGGT ++ +!!!!!!!!!! +@ref1_grp1_p002 +CTCGGTACCC ++ +########## +@ref1_grp1_p003 +GTACCCGGGG ++ +%%%%%%%%%% +@ref1_grp1_p004 +CCGGGGATCC ++ +'''''''''' +@ref1_grp1_p005 +GGATCCTCTA ++ +)))))))))) +@ref1_grp1_p006 +CCTCTAGAGT ++ +++++++++++ +@ref1_grp2_p001 +AGCTCGGTAC ++ +"""""""""" +@ref1_grp2_p002 +CGGTACCCGG ++ +$$$$$$$$$$ +@ref1_grp2_p003 +ACCCGGGGAT ++ +&&&&&&&&&& +@ref1_grp2_p004 +GGGGATCCTC ++ +(((((((((( +@ref1_grp2_p005 +ATCCTCTAGA ++ +********** +@ref1_grp2_p006 +TCTAGAGTCG ++ +,,,,,,,,,, +@ref2_grp3_p001 +GTGACACTATAGAAT ++ +~~~~~~~~~~~~~~~ +@ref2_grp3_p002 +CTGTTTCCTGTGTGA ++ +{{{{{{{{{{{{{{{ +@ref2_grp3_p003 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001 +TGCAGGCATG ++ +AAAAAAAAAA +@ref12_grp2_p001 +CAAGCTTGAG ++ +AAAAAAAAAA +@unaligned_grp3_p001 +CACTCGTTCATGACG ++ +0123456789abcde diff -r a0d039fa9771 -r a8d69aee190e test-data/2.2.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/2.2.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,72 @@ +@ref1_grp1_p001 +GTCGACTCTA ++ +---------- +@ref1_grp1_p002 +GCAGGTCGAC ++ +////////// +@ref1_grp1_p003 +GCCTGCAGGT ++ +1111111111 +@ref1_grp1_p004 +GCATGCCTGC ++ +3333333333 +@ref1_grp1_p005 +GCTTGCATGC ++ +5555555555 +@ref1_grp1_p006 +TCAAGCTTGC ++ +7777777777 +@ref1_grp2_p001 +AGGTCGACTC ++ +.......... +@ref1_grp2_p002 +CTGCAGGTCG ++ +0000000000 +@ref1_grp2_p003 +ATGCCTGCAG ++ +2222222222 +@ref1_grp2_p004 +TTGCATGCCT ++ +4444444444 +@ref1_grp2_p005 +AAGCTTGCAT ++ +6666666666 +@ref1_grp2_p006 +ACTCAAGCTT ++ +8888888888 +@ref2_grp3_p001 +CTGTTTCCTGTGTGA ++ +||||||||||||||| +@ref2_grp3_p002 +CGCCAAGCTATTTAG ++ +}}}}}}}}}}}}}}} +@ref2_grp3_p003 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001 +CACTATAGAA ++ +BBBBBBBBBB +@ref12_grp2_p001 +ATTTAGGTGA ++ +BBBBBBBBBB +@unaligned_grp3_p001 +GAAAGTGAGGAGGTG ++ +edcba9876543210 diff -r a0d039fa9771 -r a8d69aee190e test-data/2.s.fq.expected diff -r a0d039fa9771 -r a8d69aee190e test-data/2.stdout.expected diff -r a0d039fa9771 -r a8d69aee190e test-data/3.1.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/3.1.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,72 @@ +@ref1_grp1_p001 +CGAGCTCGGT ++ +!!!!!!!!!! +@ref1_grp1_p002 +CTCGGTACCC ++ +########## +@ref1_grp1_p003 +GTACCCGGGG ++ +%%%%%%%%%% +@ref1_grp1_p004 +CCGGGGATCC ++ +'''''''''' +@ref1_grp1_p005 +GGATCCTCTA ++ +)))))))))) +@ref1_grp1_p006 +CCTCTAGAGT ++ +++++++++++ +@ref1_grp2_p001 +AGCTCGGTAC ++ +"""""""""" +@ref1_grp2_p002 +CGGTACCCGG ++ +$$$$$$$$$$ +@ref1_grp2_p003 +ACCCGGGGAT ++ +&&&&&&&&&& +@ref1_grp2_p004 +GGGGATCCTC ++ +(((((((((( +@ref1_grp2_p005 +ATCCTCTAGA ++ +********** +@ref1_grp2_p006 +TCTAGAGTCG ++ +,,,,,,,,,, +@ref2_grp3_p001 +GTGACACTATAGAAT ++ +~~~~~~~~~~~~~~~ +@ref2_grp3_p002 +CTGTTTCCTGTGTGA ++ +{{{{{{{{{{{{{{{ +@ref2_grp3_p003 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001 +TGCAGGCATG ++ +AAAAAAAAAA +@ref12_grp2_p001 +CAAGCTTGAG ++ +AAAAAAAAAA +@unaligned_grp3_p001 +CACTCGTTCATGACG ++ +0123456789abcde diff -r a0d039fa9771 -r a8d69aee190e test-data/3.2.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/3.2.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,72 @@ +@ref1_grp1_p001 +GTCGACTCTA ++ +---------- +@ref1_grp1_p002 +GCAGGTCGAC ++ +////////// +@ref1_grp1_p003 +GCCTGCAGGT ++ +1111111111 +@ref1_grp1_p004 +GCATGCCTGC ++ +3333333333 +@ref1_grp1_p005 +GCTTGCATGC ++ +5555555555 +@ref1_grp1_p006 +TCAAGCTTGC ++ +7777777777 +@ref1_grp2_p001 +AGGTCGACTC ++ +.......... +@ref1_grp2_p002 +CTGCAGGTCG ++ +0000000000 +@ref1_grp2_p003 +ATGCCTGCAG ++ +2222222222 +@ref1_grp2_p004 +TTGCATGCCT ++ +4444444444 +@ref1_grp2_p005 +AAGCTTGCAT ++ +6666666666 +@ref1_grp2_p006 +ACTCAAGCTT ++ +8888888888 +@ref2_grp3_p001 +CTGTTTCCTGTGTGA ++ +||||||||||||||| +@ref2_grp3_p002 +CGCCAAGCTATTTAG ++ +}}}}}}}}}}}}}}} +@ref2_grp3_p003 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001 +CACTATAGAA ++ +BBBBBBBBBB +@ref12_grp2_p001 +ATTTAGGTGA ++ +BBBBBBBBBB +@unaligned_grp3_p001 +GAAAGTGAGGAGGTG ++ +edcba9876543210 diff -r a0d039fa9771 -r a8d69aee190e test-data/3.s.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/3.s.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,4 @@ +@ref1_grp2_p002a +CGGTACCCGG ++ +$$$$$$$$$$ diff -r a0d039fa9771 -r a8d69aee190e test-data/3.stdout.expected diff -r a0d039fa9771 -r a8d69aee190e test-data/4.1.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/4.1.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,68 @@ +@ref1_grp1_p001 +CGAGCTCGGT ++ +!!!!!!!!!! +@ref1_grp1_p002 +CTCGGTACCC ++ +########## +@ref1_grp1_p003 +GTACCCGGGG ++ +%%%%%%%%%% +@ref1_grp1_p004 +CCGGGGATCC ++ +'''''''''' +@ref1_grp1_p005 +GGATCCTCTA ++ +)))))))))) +@ref1_grp1_p006 +CCTCTAGAGT ++ +++++++++++ +@ref1_grp2_p001 +AGCTCGGTAC ++ +"""""""""" +@ref1_grp2_p002 +CGGTACCCGG ++ +$$$$$$$$$$ +@ref1_grp2_p003 +ACCCGGGGAT ++ +&&&&&&&&&& +@ref1_grp2_p004 +GGGGATCCTC ++ +(((((((((( +@ref1_grp2_p005 +ATCCTCTAGA ++ +********** +@ref1_grp2_p006 +TCTAGAGTCG ++ +,,,,,,,,,, +@ref2_grp3_p001 +GTGACACTATAGAAT ++ +~~~~~~~~~~~~~~~ +@ref2_grp3_p002 +CTGTTTCCTGTGTGA ++ +{{{{{{{{{{{{{{{ +@ref2_grp3_p003 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001 +TGCAGGCATG ++ +AAAAAAAAAA +@ref12_grp2_p001 +CAAGCTTGAG ++ +AAAAAAAAAA diff -r a0d039fa9771 -r a8d69aee190e test-data/4.2.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/4.2.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,68 @@ +@ref1_grp1_p001 +GTCGACTCTA ++ +---------- +@ref1_grp1_p002 +GCAGGTCGAC ++ +////////// +@ref1_grp1_p003 +GCCTGCAGGT ++ +1111111111 +@ref1_grp1_p004 +GCATGCCTGC ++ +3333333333 +@ref1_grp1_p005 +GCTTGCATGC ++ +5555555555 +@ref1_grp1_p006 +TCAAGCTTGC ++ +7777777777 +@ref1_grp2_p001 +AGGTCGACTC ++ +.......... +@ref1_grp2_p002 +CTGCAGGTCG ++ +0000000000 +@ref1_grp2_p003 +ATGCCTGCAG ++ +2222222222 +@ref1_grp2_p004 +TTGCATGCCT ++ +4444444444 +@ref1_grp2_p005 +AAGCTTGCAT ++ +6666666666 +@ref1_grp2_p006 +ACTCAAGCTT ++ +8888888888 +@ref2_grp3_p001 +CTGTTTCCTGTGTGA ++ +||||||||||||||| +@ref2_grp3_p002 +CGCCAAGCTATTTAG ++ +}}}}}}}}}}}}}}} +@ref2_grp3_p003 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001 +CACTATAGAA ++ +BBBBBBBBBB +@ref12_grp2_p001 +ATTTAGGTGA ++ +BBBBBBBBBB diff -r a0d039fa9771 -r a8d69aee190e test-data/4.s.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/4.s.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,8 @@ +@ref1_grp2_p002a +CGGTACCCGG ++ +$$$$$$$$$$ +@unaligned_grp3_p001 +CACTCGTTCATGACG ++ +0123456789abcde diff -r a0d039fa9771 -r a8d69aee190e test-data/4.stdout.expected diff -r a0d039fa9771 -r a8d69aee190e test-data/5.1.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/5.1.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,68 @@ +@ref1_grp1_p001/1 +CGAGCTCGGT ++ +!!!!!!!!!! +@ref1_grp1_p002/1 +CTCGGTACCC ++ +########## +@ref1_grp1_p003/1 +GTACCCGGGG ++ +%%%%%%%%%% +@ref1_grp1_p004/1 +CCGGGGATCC ++ +'''''''''' +@ref1_grp1_p005/1 +GGATCCTCTA ++ +)))))))))) +@ref1_grp1_p006/1 +CCTCTAGAGT ++ +++++++++++ +@ref1_grp2_p001/1 +AGCTCGGTAC ++ +"""""""""" +@ref1_grp2_p002/1 +CGGTACCCGG ++ +$$$$$$$$$$ +@ref1_grp2_p003/1 +ACCCGGGGAT ++ +&&&&&&&&&& +@ref1_grp2_p004/1 +GGGGATCCTC ++ +(((((((((( +@ref1_grp2_p005/1 +ATCCTCTAGA ++ +********** +@ref1_grp2_p006/1 +TCTAGAGTCG ++ +,,,,,,,,,, +@ref2_grp3_p001/1 +GTGACACTATAGAAT ++ +~~~~~~~~~~~~~~~ +@ref2_grp3_p002/1 +CTGTTTCCTGTGTGA ++ +{{{{{{{{{{{{{{{ +@ref2_grp3_p003/1 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001/1 +TGCAGGCATG ++ +AAAAAAAAAA +@ref12_grp2_p001/1 +CAAGCTTGAG ++ +AAAAAAAAAA diff -r a0d039fa9771 -r a8d69aee190e test-data/5.2.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/5.2.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,68 @@ +@ref1_grp1_p001/2 +GTCGACTCTA ++ +---------- +@ref1_grp1_p002/2 +GCAGGTCGAC ++ +////////// +@ref1_grp1_p003/2 +GCCTGCAGGT ++ +1111111111 +@ref1_grp1_p004/2 +GCATGCCTGC ++ +3333333333 +@ref1_grp1_p005/2 +GCTTGCATGC ++ +5555555555 +@ref1_grp1_p006/2 +TCAAGCTTGC ++ +7777777777 +@ref1_grp2_p001/2 +AGGTCGACTC ++ +.......... +@ref1_grp2_p002/2 +CTGCAGGTCG ++ +0000000000 +@ref1_grp2_p003/2 +ATGCCTGCAG ++ +2222222222 +@ref1_grp2_p004/2 +TTGCATGCCT ++ +4444444444 +@ref1_grp2_p005/2 +AAGCTTGCAT ++ +6666666666 +@ref1_grp2_p006/2 +ACTCAAGCTT ++ +8888888888 +@ref2_grp3_p001/2 +CTGTTTCCTGTGTGA ++ +||||||||||||||| +@ref2_grp3_p002/2 +CGCCAAGCTATTTAG ++ +}}}}}}}}}}}}}}} +@ref2_grp3_p003/2 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001/2 +CACTATAGAA ++ +BBBBBBBBBB +@ref12_grp2_p001/2 +ATTTAGGTGA ++ +BBBBBBBBBB diff -r a0d039fa9771 -r a8d69aee190e test-data/5.s.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/5.s.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,8 @@ +@ref1_grp2_p002a/1 +CGGTACCCGG ++ +$$$$$$$$$$ +@unaligned_grp3_p001/1 +CACTCGTTCATGACG ++ +0123456789abcde diff -r a0d039fa9771 -r a8d69aee190e test-data/6.1.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/6.1.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,68 @@ +@ref1_grp1_p001/1 RG:Z:grp1 BC:Z:AC-GT +CGAGCTCGGT ++ +!!!!!!!!!! +@ref1_grp1_p002/1 RG:Z:grp1 BC:Z:AATT+CCGG +CTCGGTACCC ++ +########## +@ref1_grp1_p003/1 RG:Z:grp1 +GTACCCGGGG ++ +%%%%%%%%%% +@ref1_grp1_p004/1 RG:Z:grp1 +CCGGGGATCC ++ +'''''''''' +@ref1_grp1_p005/1 RG:Z:grp1 +GGATCCTCTA ++ +)))))))))) +@ref1_grp1_p006/1 RG:Z:grp1 +CCTCTAGAGT ++ +++++++++++ +@ref1_grp2_p001/1 RG:Z:grp2 BC:Z:TG+CA QT:Z:ab+cd +AGCTCGGTAC ++ +"""""""""" +@ref1_grp2_p002/1 RG:Z:grp2 +CGGTACCCGG ++ +$$$$$$$$$$ +@ref1_grp2_p003/1 RG:Z:grp2 +ACCCGGGGAT ++ +&&&&&&&&&& +@ref1_grp2_p004/1 RG:Z:grp2 +GGGGATCCTC ++ +(((((((((( +@ref1_grp2_p005/1 RG:Z:grp2 +ATCCTCTAGA ++ +********** +@ref1_grp2_p006/1 RG:Z:grp2 +TCTAGAGTCG ++ +,,,,,,,,,, +@ref2_grp3_p001/1 RG:Z:grp3 +GTGACACTATAGAAT ++ +~~~~~~~~~~~~~~~ +@ref2_grp3_p002/1 RG:Z:grp3 +CTGTTTCCTGTGTGA ++ +{{{{{{{{{{{{{{{ +@ref2_grp3_p003/1 RG:Z:grp3 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001/1 RG:Z:grp1 +TGCAGGCATG ++ +AAAAAAAAAA +@ref12_grp2_p001/1 RG:Z:grp2 +CAAGCTTGAG ++ +AAAAAAAAAA diff -r a0d039fa9771 -r a8d69aee190e test-data/6.2.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/6.2.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,68 @@ +@ref1_grp1_p001/2 RG:Z:grp1 +GTCGACTCTA ++ +---------- +@ref1_grp1_p002/2 RG:Z:grp1 +GCAGGTCGAC ++ +////////// +@ref1_grp1_p003/2 RG:Z:grp1 +GCCTGCAGGT ++ +1111111111 +@ref1_grp1_p004/2 RG:Z:grp1 +GCATGCCTGC ++ +3333333333 +@ref1_grp1_p005/2 RG:Z:grp1 +GCTTGCATGC ++ +5555555555 +@ref1_grp1_p006/2 RG:Z:grp1 +TCAAGCTTGC ++ +7777777777 +@ref1_grp2_p001/2 RG:Z:grp2 +AGGTCGACTC ++ +.......... +@ref1_grp2_p002/2 RG:Z:grp2 +CTGCAGGTCG ++ +0000000000 +@ref1_grp2_p003/2 RG:Z:grp2 +ATGCCTGCAG ++ +2222222222 +@ref1_grp2_p004/2 RG:Z:grp2 +TTGCATGCCT ++ +4444444444 +@ref1_grp2_p005/2 RG:Z:grp2 +AAGCTTGCAT ++ +6666666666 +@ref1_grp2_p006/2 RG:Z:grp2 +ACTCAAGCTT ++ +8888888888 +@ref2_grp3_p001/2 RG:Z:grp3 +CTGTTTCCTGTGTGA ++ +||||||||||||||| +@ref2_grp3_p002/2 RG:Z:grp3 +CGCCAAGCTATTTAG ++ +}}}}}}}}}}}}}}} +@ref2_grp3_p003/2 RG:Z:grp3 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001/2 RG:Z:grp1 +CACTATAGAA ++ +BBBBBBBBBB +@ref12_grp2_p001/2 RG:Z:grp2 +ATTTAGGTGA ++ +BBBBBBBBBB diff -r a0d039fa9771 -r a8d69aee190e test-data/6.s.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/6.s.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,8 @@ +@ref1_grp2_p002a/1 RG:Z:grp2 +CGGTACCCGG ++ +$$$$$$$$$$ +@unaligned_grp3_p001/1 RG:Z:grp3 +CACTCGTTCATGACG ++ +0123456789abcde diff -r a0d039fa9771 -r a8d69aee190e test-data/7.1.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/7.1.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,68 @@ +@ref1_grp1_p001/1 RG:Z:grp1 BC:Z:AC-GT MD:Z:10 +CGAGCTCGGT ++ +!!!!!!!!!! +@ref1_grp1_p002/1 RG:Z:grp1 BC:Z:AATT+CCGG MD:Z:10 +CTCGGTACCC ++ +########## +@ref1_grp1_p003/1 RG:Z:grp1 MD:Z:10 +GTACCCGGGG ++ +%%%%%%%%%% +@ref1_grp1_p004/1 RG:Z:grp1 MD:Z:10 +CCGGGGATCC ++ +'''''''''' +@ref1_grp1_p005/1 RG:Z:grp1 MD:Z:10 ia:i:40000 +GGATCCTCTA ++ +)))))))))) +@ref1_grp1_p006/1 RG:Z:grp1 MD:Z:10 ia:i:255 +CCTCTAGAGT ++ +++++++++++ +@ref1_grp2_p001/1 RG:Z:grp2 BC:Z:TG+CA QT:Z:ab+cd MD:Z:8 +AGCTCGGTAC ++ +"""""""""" +@ref1_grp2_p002/1 RG:Z:grp2 MD:Z:10 +CGGTACCCGG ++ +$$$$$$$$$$ +@ref1_grp2_p003/1 RG:Z:grp2 MD:Z:10 ia:i:4294967295 +ACCCGGGGAT ++ +&&&&&&&&&& +@ref1_grp2_p004/1 RG:Z:grp2 MD:Z:10 ia:i:-2147483648 +GGGGATCCTC ++ +(((((((((( +@ref1_grp2_p005/1 RG:Z:grp2 MD:Z:10 ia:i:-1000 +ATCCTCTAGA ++ +********** +@ref1_grp2_p006/1 RG:Z:grp2 MD:Z:10 ia:i:-1 +TCTAGAGTCG ++ +,,,,,,,,,, +@ref2_grp3_p001/1 RG:Z:grp3 MD:Z:15 +GTGACACTATAGAAT ++ +~~~~~~~~~~~~~~~ +@ref2_grp3_p002/1 RG:Z:grp3 MD:Z:15 +CTGTTTCCTGTGTGA ++ +{{{{{{{{{{{{{{{ +@ref2_grp3_p003/1 RG:Z:grp3 MD:Z:1T0T0C0T0A0T0A0G0T0G0T0C0A0C0 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001/1 RG:Z:grp1 MD:Z:10 +TGCAGGCATG ++ +AAAAAAAAAA +@ref12_grp2_p001/1 RG:Z:grp2 MD:Z:10 +CAAGCTTGAG ++ +AAAAAAAAAA diff -r a0d039fa9771 -r a8d69aee190e test-data/7.2.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/7.2.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,68 @@ +@ref1_grp1_p001/2 RG:Z:grp1 MD:Z:10 +GTCGACTCTA ++ +---------- +@ref1_grp1_p002/2 RG:Z:grp1 MD:Z:10 +GCAGGTCGAC ++ +////////// +@ref1_grp1_p003/2 RG:Z:grp1 MD:Z:10 +GCCTGCAGGT ++ +1111111111 +@ref1_grp1_p004/2 RG:Z:grp1 MD:Z:10 +GCATGCCTGC ++ +3333333333 +@ref1_grp1_p005/2 RG:Z:grp1 MD:Z:10 +GCTTGCATGC ++ +5555555555 +@ref1_grp1_p006/2 RG:Z:grp1 MD:Z:10 +TCAAGCTTGC ++ +7777777777 +@ref1_grp2_p001/2 RG:Z:grp2 MD:Z:10 +AGGTCGACTC ++ +.......... +@ref1_grp2_p002/2 RG:Z:grp2 MD:Z:10 +CTGCAGGTCG ++ +0000000000 +@ref1_grp2_p003/2 RG:Z:grp2 MD:Z:10 +ATGCCTGCAG ++ +2222222222 +@ref1_grp2_p004/2 RG:Z:grp2 MD:Z:10 +TTGCATGCCT ++ +4444444444 +@ref1_grp2_p005/2 RG:Z:grp2 MD:Z:10 +AAGCTTGCAT ++ +6666666666 +@ref1_grp2_p006/2 RG:Z:grp2 MD:Z:10 +ACTCAAGCTT ++ +8888888888 +@ref2_grp3_p001/2 RG:Z:grp3 MD:Z:0T0A0A1C0A0T0G0G0T0C0A1A0G0 +CTGTTTCCTGTGTGA ++ +||||||||||||||| +@ref2_grp3_p002/2 RG:Z:grp3 MD:Z:15 +CGCCAAGCTATTTAG ++ +}}}}}}}}}}}}}}} +@ref2_grp3_p003/2 RG:Z:grp3 MD:Z:0A0T0T0C0T0A0T0A0G0T0G0T1A0C0 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001/2 RG:Z:grp1 MD:Z:10 +CACTATAGAA ++ +BBBBBBBBBB +@ref12_grp2_p001/2 RG:Z:grp2 MD:Z:10 +ATTTAGGTGA ++ +BBBBBBBBBB diff -r a0d039fa9771 -r a8d69aee190e test-data/7.s.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/7.s.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,8 @@ +@ref1_grp2_p002a/1 RG:Z:grp2 MD:Z:10 +CGGTACCCGG ++ +$$$$$$$$$$ +@unaligned_grp3_p001/1 RG:Z:grp3 +CACTCGTTCATGACG ++ +0123456789abcde diff -r a0d039fa9771 -r a8d69aee190e test-data/8.1.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/8.1.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,68 @@ +@ref1_grp1_p001 1:N:0:GT +CGAGCTCGGT ++ +!!!!!!!!!! +@ref1_grp1_p002 1:N:0:TT +CTCGGTACCC ++ +########## +@ref1_grp1_p003 +GTACCCGGGG ++ +%%%%%%%%%% +@ref1_grp1_p004 +CCGGGGATCC ++ +'''''''''' +@ref1_grp1_p005 +GGATCCTCTA ++ +)))))))))) +@ref1_grp1_p006 +CCTCTAGAGT ++ +++++++++++ +@ref1_grp2_p001 1:N:0:CA +AGCTCGGTAC ++ +"""""""""" +@ref1_grp2_p002 +CGGTACCCGG ++ +$$$$$$$$$$ +@ref1_grp2_p003 +ACCCGGGGAT ++ +&&&&&&&&&& +@ref1_grp2_p004 +GGGGATCCTC ++ +(((((((((( +@ref1_grp2_p005 +ATCCTCTAGA ++ +********** +@ref1_grp2_p006 +TCTAGAGTCG ++ +,,,,,,,,,, +@ref2_grp3_p001 +GTGACACTATAGAAT ++ +~~~~~~~~~~~~~~~ +@ref2_grp3_p002 +CTGTTTCCTGTGTGA ++ +{{{{{{{{{{{{{{{ +@ref2_grp3_p003 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001 +TGCAGGCATG ++ +AAAAAAAAAA +@ref12_grp2_p001 +CAAGCTTGAG ++ +AAAAAAAAAA diff -r a0d039fa9771 -r a8d69aee190e test-data/8.2.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/8.2.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,68 @@ +@ref1_grp1_p001 1:N:0:GT +GTCGACTCTA ++ +---------- +@ref1_grp1_p002 1:N:0:TT +GCAGGTCGAC ++ +////////// +@ref1_grp1_p003 +GCCTGCAGGT ++ +1111111111 +@ref1_grp1_p004 +GCATGCCTGC ++ +3333333333 +@ref1_grp1_p005 +GCTTGCATGC ++ +5555555555 +@ref1_grp1_p006 +TCAAGCTTGC ++ +7777777777 +@ref1_grp2_p001 1:N:0:CA +AGGTCGACTC ++ +.......... +@ref1_grp2_p002 +CTGCAGGTCG ++ +0000000000 +@ref1_grp2_p003 +ATGCCTGCAG ++ +2222222222 +@ref1_grp2_p004 +TTGCATGCCT ++ +4444444444 +@ref1_grp2_p005 +AAGCTTGCAT ++ +6666666666 +@ref1_grp2_p006 +ACTCAAGCTT ++ +8888888888 +@ref2_grp3_p001 +CTGTTTCCTGTGTGA ++ +||||||||||||||| +@ref2_grp3_p002 +CGCCAAGCTATTTAG ++ +}}}}}}}}}}}}}}} +@ref2_grp3_p003 +ACGTMRWSYKVHDBN ++ +0123456789abcd! +@ref12_grp1_p001 +CACTATAGAA ++ +BBBBBBBBBB +@ref12_grp2_p001 +ATTTAGGTGA ++ +BBBBBBBBBB diff -r a0d039fa9771 -r a8d69aee190e test-data/8.i.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/8.i.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,12 @@ +@ref1_grp1_p001 1:N:0:GT +GT ++ +"" +@ref1_grp1_p002 1:N:0:TT +TT ++ +"" +@ref1_grp2_p001 1:N:0:CA +CA ++ +cd diff -r a0d039fa9771 -r a8d69aee190e test-data/8.s.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/8.s.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,8 @@ +@ref1_grp2_p002a +CGGTACCCGG ++ +$$$$$$$$$$ +@unaligned_grp3_p001 +CACTCGTTCATGACG ++ +0123456789abcde diff -r a0d039fa9771 -r a8d69aee190e test-data/9.1.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/9.1.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,28 @@ +@HS2000-355_269:2:1108:12969:26408 +CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCT ++ +BCBFFFFFGGHHHJJJJIIJGIIIJIJIJIJII990?G=)?0?FH?@7;;A############################## +@HS2000-355_269:1:1114:7529:75240 +TAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTACCCTAACCCTAACCCTCACCCTAACCCTAACCCTAACCCTAACCCTAACCCCAACCCTACCC ++ +@CCFFFFFDDAFB@GGHFGH@FHIFECBGAEC9CBBF?GFGDGIEGG>GCGI;=(8.6@=A)=???;?6;;66=2;;(,5;D>;@DEC@H(=FA@(==@)6=22)7;;?A>AA2;;;?@A##################### +@HS2000-690_130:8:2104:17804:42012 +ACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCCAACCCCAACCCCCACCCCCACCC ++ +CCCFFFFFHGDFHIIJJIIJJIGFHEHIIIJIGIEGDHHIIJJJHIHI=D(BC@FG2;=CEECH@CDF################################ +@HS2000-355_269:2:2213:5874:97462 +ACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTACCCCTAACCCTAACCCAAACCCTAACCCTAACCACAACCCACACCCATATCT ++ +@@@FDFADHDDBFG;CGB;BFHDHGGIG3CGGCC;9?GDF939BFG(B#################################################### diff -r a0d039fa9771 -r a8d69aee190e test-data/9.2.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/9.2.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,12 @@ +@HS2000-355_269:1:2307:11945:73421 +AGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGGTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTGGGGTTGGGG ++ +?@@DBDBDFAAC;CBG;AAA+AAB6AA12?22?@*:)?1??ABB###################################################################### diff -r a0d039fa9771 -r a8d69aee190e test-data/bam2fq.001.sam --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/bam2fq.001.sam Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,65 @@ +@HD VN:1.4 SO:queryname +@RG ID:grp1 DS:Group 1 LB:Library 1 SM:Sample +@RG ID:grp2 DS:Group 2 LB:Library 2 SM:Sample +@RG ID:grp3 DS:Group 3 LB:Library 3 SM:Sample +@PG ID:prog1 PN:emacs CL:emacs VN:23.1.1 +@CO The MIT License +@CO +@CO Copyright (c) 2014, 2015 Genome Research Ltd. +@CO +@CO Permission is hereby granted, free of charge, to any person obtaining a copy +@CO of this software and associated documentation files (the "Software"), to deal +@CO in the Software without restriction, including without limitation the rights +@CO to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +@CO copies of the Software, and to permit persons to whom the Software is +@CO furnished to do so, subject to the following conditions: +@CO +@CO The above copyright notice and this permission notice shall be included in +@CO all copies or substantial portions of the Software. +@CO +@CO THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +@CO IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +@CO FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +@CO AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +@CO LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +@CO OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +@CO THE SOFTWARE. +@SQ SN:ref1 LN:56 M5:08c04d512d4797d9ba2a156c1daba468 +@SQ SN:ref2 LN:60 M5:7c35feac7036c1cdef3bee0cc4b21437 +ref1_grp1_p001 99 ref1 1 0 10M = 25 34 CGAGCTCGGT !!!!!!!!!! MD:Z:10 NM:i:0 RG:Z:grp1 BC:Z:ACGT H0:i:1 aa:A:! ab:A:~ fa:f:3.14159 za:Z:Hello world! ha:H:DEADBEEF ba:B:c,-128,0,127 bb:B:C,0,127,255 bc:B:s,-32768,0,32767 bd:B:S,0,32768,65535 be:B:i,-2147483648,0,2147483647 bf:B:I,0,2147483648,4294967295 bg:B:f,2.71828,6.626e-34,2.9979e+09 +ref1_grp1_p001 147 ref1 25 12 10M = 1 -34 TAGAGTCGAC ---------- MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p002 99 ref1 5 2 10M = 29 34 CTCGGTACCC ########## MD:Z:10 NM:i:0 RG:Z:grp1 BC:Z:AATTCCGG H0:i:1 aa:A:a ab:A:z fa:f:4.3597e-18 za:Z:Another string ha:H:2000AD +ref1_grp1_p002 147 ref1 29 14 10M = 5 -34 GTCGACCTGC ////////// MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p003 99 ref1 9 4 10M = 33 34 GTACCCGGGG %%%%%%%%%% MD:Z:10 NM:i:0 fa:f:1.66e-27 RG:Z:grp1 +ref1_grp1_p003 147 ref1 33 16 10M = 9 -34 ACCTGCAGGC 1111111111 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p004 99 ref1 13 6 10M = 37 34 CCGGGGATCC '''''''''' MD:Z:10 NM:i:0 fa:f:1.38e-23 za:Z:xRG:Z:grp2 RG:Z:grp1 +ref1_grp1_p004 147 ref1 37 18 10M = 13 -34 GCAGGCATGC 3333333333 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p005 99 ref1 17 8 10M = 41 34 GGATCCTCTA )))))))))) MD:Z:10 NM:i:0 RG:Z:grp1 ia:i:40000 +ref1_grp1_p005 147 ref1 41 20 10M = 17 -34 GCATGCAAGC 5555555555 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p006 99 ref1 21 10 10M = 45 34 CCTCTAGAGT ++++++++++ MD:Z:10 NM:i:0 RG:Z:grp1 ia:i:255 +ref1_grp1_p006 147 ref1 45 22 10M = 21 -34 GCAAGCTTGA 7777777777 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp2_p001 99 ref1 3 1 8M2S = 27 34 AGCTCGGTAC """""""""" MD:Z:8 NM:i:0 RG:Z:grp2 BC:Z:TGCA H0:i:1 aa:A:A ab:A:Z fa:f:6.67e-11 za:Z:!"$%^&*() ha:H:CAFE +ref1_grp2_p001 2147 ref1 11 1 8H2M = 27 34 AC "" MD:Z:2 NM:i:0 RG:Z:grp2 BC:Z:TGCA H0:i:1 aa:A:A ab:A:Z fa:f:6.67e-11 za:Z:!"$%^&*() ha:H:CAFE +ref1_grp2_p001 147 ref1 27 13 10M = 3 -34 GAGTCGACCT .......... MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p002 99 ref1 7 3 10M = 31 34 CGGTACCCGG $$$$$$$$$$ MD:Z:10 NM:i:0 fa:f:6.022e+23 RG:Z:grp2 +ref1_grp2_p002 147 ref1 31 15 10M = 7 -34 CGACCTGCAG 0000000000 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p003 99 ref1 11 5 10M = 35 34 ACCCGGGGAT &&&&&&&&&& MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:4294967295 +ref1_grp2_p003 147 ref1 35 17 10M = 11 -34 CTGCAGGCAT 2222222222 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p004 99 ref1 15 7 10M = 39 34 GGGGATCCTC (((((((((( MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-2147483648 +ref1_grp2_p004 147 ref1 39 19 10M = 15 -34 AGGCATGCAA 4444444444 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p005 99 ref1 19 9 10M = 43 34 ATCCTCTAGA ********** MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-1000 +ref1_grp2_p005 147 ref1 43 21 10M = 19 -34 ATGCAAGCTT 6666666666 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p006 99 ref1 23 11 10M = 47 34 TCTAGAGTCG ,,,,,,,,,, MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-1 +ref1_grp2_p006 147 ref1 47 23 10M = 23 -34 AAGCTTGAGT 8888888888 MD:Z:10 NM:i:0 RG:Z:grp2 +ref2_grp3_p001 83 ref2 1 99 15M = 31 45 ATTCTATAGTGTCAC ~~~~~~~~~~~~~~~ MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p001 163 ref2 31 99 15M = 1 -45 CTGTTTCCTGTGTGA ||||||||||||||| MD:Z:0T0A0A1C0A0T0G0G0T0C0A1A0G0 NM:i:13 RG:Z:grp3 +ref2_grp3_p002 99 ref2 46 99 15M = 16 -45 CTGTTTCCTGTGTGA {{{{{{{{{{{{{{{ MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p002 147 ref2 16 99 15M = 46 45 CTAAATAGCTTGGCG }}}}}}}}}}}}}}} MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p003 99 ref2 1 99 15M = 1 15 ACGTMRWSYKVHDBN 0123456789abcd! MD:Z:1T0T0C0T0A0T0A0G0T0G0T0C0A0C0 NM:i:14 RG:Z:grp3 +ref2_grp3_p003 147 ref2 1 99 15M = 1 -15 NVHDBMRSWYKACGT !dcba9876543210 MD:Z:0A0T0T0C0T0A0T0A0G0T0G0T1A0C0 NM:i:14 RG:Z:grp3 +ref12_grp1_p001 97 ref1 36 50 10M ref2 2 0 TGCAGGCATG AAAAAAAAAA MD:Z:10 NM:i:0 RG:Z:grp1 +ref12_grp1_p001 145 ref2 2 50 10M ref1 36 0 TTCTATAGTG BBBBBBBBBB MD:Z:10 NM:i:0 RG:Z:grp1 +ref12_grp2_p001 97 ref1 46 50 10M ref2 12 0 CAAGCTTGAG AAAAAAAAAA MD:Z:10 NM:i:0 RG:Z:grp2 +ref12_grp2_p001 145 ref2 12 50 10M ref1 46 0 TCACCTAAAT BBBBBBBBBB MD:Z:10 NM:i:0 RG:Z:grp2 +unaligned_grp3_p001 77 * 0 0 * * 0 0 CACTCGTTCATGACG 0123456789abcde RG:Z:grp3 +unaligned_grp3_p001 141 * 0 0 * * 0 0 GAAAGTGAGGAGGTG edcba9876543210 RG:Z:grp3 diff -r a0d039fa9771 -r a8d69aee190e test-data/bam2fq.002.sam --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/bam2fq.002.sam Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,66 @@ +@HD VN:1.4 SO:queryname +@RG ID:grp1 DS:Group 1 LB:Library 1 SM:Sample +@RG ID:grp2 DS:Group 2 LB:Library 2 SM:Sample +@RG ID:grp3 DS:Group 3 LB:Library 3 SM:Sample +@PG ID:prog1 PN:emacs CL:emacs VN:23.1.1 +@CO The MIT License +@CO +@CO Copyright (c) 2014, 2015 Genome Research Ltd. +@CO +@CO Permission is hereby granted, free of charge, to any person obtaining a copy +@CO of this software and associated documentation files (the "Software"), to deal +@CO in the Software without restriction, including without limitation the rights +@CO to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +@CO copies of the Software, and to permit persons to whom the Software is +@CO furnished to do so, subject to the following conditions: +@CO +@CO The above copyright notice and this permission notice shall be included in +@CO all copies or substantial portions of the Software. +@CO +@CO THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +@CO IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +@CO FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +@CO AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +@CO LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +@CO OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +@CO THE SOFTWARE. +@SQ SN:ref1 LN:56 M5:08c04d512d4797d9ba2a156c1daba468 +@SQ SN:ref2 LN:60 M5:7c35feac7036c1cdef3bee0cc4b21437 +ref1_grp1_p001 99 ref1 1 0 10M = 25 34 CGAGCTCGGT !!!!!!!!!! MD:Z:10 NM:i:0 RG:Z:grp1 BC:Z:ACGT H0:i:1 aa:A:! ab:A:~ fa:f:3.14159 za:Z:Hello world! ha:H:DEADBEEF ba:B:c,-128,0,127 bb:B:C,0,127,255 bc:B:s,-32768,0,32767 bd:B:S,0,32768,65535 be:B:i,-2147483648,0,2147483647 bf:B:I,0,2147483648,4294967295 bg:B:f,2.71828,6.626e-34,2.9979e+09 +ref1_grp1_p001 147 ref1 25 12 10M = 1 -34 TAGAGTCGAC ---------- MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p002 99 ref1 5 2 10M = 29 34 CTCGGTACCC ########## MD:Z:10 NM:i:0 RG:Z:grp1 BC:Z:AATTCCGG H0:i:1 aa:A:a ab:A:z fa:f:4.3597e-18 za:Z:Another string ha:H:2000AD +ref1_grp1_p002 147 ref1 29 14 10M = 5 -34 GTCGACCTGC ////////// MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p003 99 ref1 9 4 10M = 33 34 GTACCCGGGG %%%%%%%%%% MD:Z:10 NM:i:0 fa:f:1.66e-27 RG:Z:grp1 +ref1_grp1_p003 147 ref1 33 16 10M = 9 -34 ACCTGCAGGC 1111111111 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p004 99 ref1 13 6 10M = 37 34 CCGGGGATCC '''''''''' MD:Z:10 NM:i:0 fa:f:1.38e-23 za:Z:xRG:Z:grp2 RG:Z:grp1 +ref1_grp1_p004 147 ref1 37 18 10M = 13 -34 GCAGGCATGC 3333333333 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p005 99 ref1 17 8 10M = 41 34 GGATCCTCTA )))))))))) MD:Z:10 NM:i:0 RG:Z:grp1 ia:i:40000 +ref1_grp1_p005 147 ref1 41 20 10M = 17 -34 GCATGCAAGC 5555555555 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p006 99 ref1 21 10 10M = 45 34 CCTCTAGAGT ++++++++++ MD:Z:10 NM:i:0 RG:Z:grp1 ia:i:255 +ref1_grp1_p006 147 ref1 45 22 10M = 21 -34 GCAAGCTTGA 7777777777 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp2_p001 99 ref1 3 1 8M2S = 27 34 AGCTCGGTAC """""""""" MD:Z:8 NM:i:0 RG:Z:grp2 BC:Z:TGCA H0:i:1 aa:A:A ab:A:Z fa:f:6.67e-11 za:Z:!"$%^&*() ha:H:CAFE +ref1_grp2_p001 2147 ref1 11 1 8H2M = 27 34 AC "" MD:Z:2 NM:i:0 RG:Z:grp2 BC:Z:TGCA H0:i:1 aa:A:A ab:A:Z fa:f:6.67e-11 za:Z:!"$%^&*() ha:H:CAFE +ref1_grp2_p001 147 ref1 27 13 10M = 3 -34 GAGTCGACCT .......... MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p002a 99 ref1 7 3 10M = 31 34 CGGTACCCGG $$$$$$$$$$ MD:Z:10 NM:i:0 fa:f:6.022e+23 RG:Z:grp2 +ref1_grp2_p002 99 ref1 7 3 10M = 31 34 CGGTACCCGG $$$$$$$$$$ MD:Z:10 NM:i:0 fa:f:6.022e+23 RG:Z:grp2 +ref1_grp2_p002 147 ref1 31 15 10M = 7 -34 CGACCTGCAG 0000000000 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p003 99 ref1 11 5 10M = 35 34 ACCCGGGGAT &&&&&&&&&& MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:4294967295 +ref1_grp2_p003 147 ref1 35 17 10M = 11 -34 CTGCAGGCAT 2222222222 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p004 99 ref1 15 7 10M = 39 34 GGGGATCCTC (((((((((( MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-2147483648 +ref1_grp2_p004 147 ref1 39 19 10M = 15 -34 AGGCATGCAA 4444444444 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p005 99 ref1 19 9 10M = 43 34 ATCCTCTAGA ********** MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-1000 +ref1_grp2_p005 147 ref1 43 21 10M = 19 -34 ATGCAAGCTT 6666666666 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p006 99 ref1 23 11 10M = 47 34 TCTAGAGTCG ,,,,,,,,,, MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-1 +ref1_grp2_p006 147 ref1 47 23 10M = 23 -34 AAGCTTGAGT 8888888888 MD:Z:10 NM:i:0 RG:Z:grp2 +ref2_grp3_p001 83 ref2 1 99 15M = 31 45 ATTCTATAGTGTCAC ~~~~~~~~~~~~~~~ MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p001 163 ref2 31 99 15M = 1 -45 CTGTTTCCTGTGTGA ||||||||||||||| MD:Z:0T0A0A1C0A0T0G0G0T0C0A1A0G0 NM:i:13 RG:Z:grp3 +ref2_grp3_p002 99 ref2 46 99 15M = 16 -45 CTGTTTCCTGTGTGA {{{{{{{{{{{{{{{ MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p002 147 ref2 16 99 15M = 46 45 CTAAATAGCTTGGCG }}}}}}}}}}}}}}} MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p003 99 ref2 1 99 15M = 1 15 ACGTMRWSYKVHDBN 0123456789abcd! MD:Z:1T0T0C0T0A0T0A0G0T0G0T0C0A0C0 NM:i:14 RG:Z:grp3 +ref2_grp3_p003 147 ref2 1 99 15M = 1 -15 NVHDBMRSWYKACGT !dcba9876543210 MD:Z:0A0T0T0C0T0A0T0A0G0T0G0T1A0C0 NM:i:14 RG:Z:grp3 +ref12_grp1_p001 97 ref1 36 50 10M ref2 2 0 TGCAGGCATG AAAAAAAAAA MD:Z:10 NM:i:0 RG:Z:grp1 +ref12_grp1_p001 145 ref2 2 50 10M ref1 36 0 TTCTATAGTG BBBBBBBBBB MD:Z:10 NM:i:0 RG:Z:grp1 +ref12_grp2_p001 97 ref1 46 50 10M ref2 12 0 CAAGCTTGAG AAAAAAAAAA MD:Z:10 NM:i:0 RG:Z:grp2 +ref12_grp2_p001 145 ref2 12 50 10M ref1 46 0 TCACCTAAAT BBBBBBBBBB MD:Z:10 NM:i:0 RG:Z:grp2 +unaligned_grp3_p001 77 * 0 0 * * 0 0 CACTCGTTCATGACG 0123456789abcde RG:Z:grp3 +unaligned_grp3_p001 141 * 0 0 * * 0 0 GAAAGTGAGGAGGTG edcba9876543210 RG:Z:grp3 diff -r a0d039fa9771 -r a8d69aee190e test-data/bam2fq.003.sam --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/bam2fq.003.sam Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,65 @@ +@HD VN:1.4 SO:queryname +@RG ID:grp1 DS:Group 1 LB:Library 1 SM:Sample +@RG ID:grp2 DS:Group 2 LB:Library 2 SM:Sample +@RG ID:grp3 DS:Group 3 LB:Library 3 SM:Sample +@PG ID:prog1 PN:emacs CL:emacs VN:23.1.1 +@CO The MIT License +@CO +@CO Copyright (c) 2014, 2015 Genome Research Ltd. +@CO +@CO Permission is hereby granted, free of charge, to any person obtaining a copy +@CO of this software and associated documentation files (the "Software"), to deal +@CO in the Software without restriction, including without limitation the rights +@CO to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +@CO copies of the Software, and to permit persons to whom the Software is +@CO furnished to do so, subject to the following conditions: +@CO +@CO The above copyright notice and this permission notice shall be included in +@CO all copies or substantial portions of the Software. +@CO +@CO THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +@CO IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +@CO FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +@CO AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +@CO LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +@CO OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +@CO THE SOFTWARE. +@SQ SN:ref1 LN:56 M5:08c04d512d4797d9ba2a156c1daba468 +@SQ SN:ref2 LN:60 M5:7c35feac7036c1cdef3bee0cc4b21437 +ref1_grp1_p001 99 ref1 1 0 10M = 25 34 CGAGCTCGGT !!!!!!!!!! MD:Z:10 NM:i:0 RG:Z:grp1 BC:Z:ACGT H0:i:1 aa:A:! ab:A:~ fa:f:3.14159 za:Z:Hello world! ha:H:DEADBEEF ba:B:c,-128,0,127 bb:B:C,0,127,255 bc:B:s,-32768,0,32767 bd:B:S,0,32768,65535 be:B:i,-2147483648,0,2147483647 bf:B:I,0,2147483648,4294967295 bg:B:f,2.71828,6.626e-34,2.9979e+09 +ref1_grp1_p001 147 ref1 25 12 10M = 1 -34 TAGAGTCGAC ---------- MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p002 99 ref1 5 2 10M = 29 34 CTCGGTACCC ########## MD:Z:10 NM:i:0 RG:Z:grp1 BC:Z:AATTCCGG H0:i:1 aa:A:a ab:A:z fa:f:4.3597e-18 za:Z:Another string ha:H:2000AD +ref1_grp1_p002 147 ref1 29 14 10M = 5 -34 GTCGACCTGC ////////// MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p003 99 ref1 9 4 10M = 33 34 GTACCCGGGG %%%%%%%%%% MD:Z:10 NM:i:0 fa:f:1.66e-27 RG:Z:grp1 +ref1_grp1_p003 147 ref1 33 16 10M = 9 -34 ACCTGCAGGC 1111111111 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p004 99 ref1 13 6 10M = 37 34 CCGGGGATCC '''''''''' MD:Z:10 NM:i:0 fa:f:1.38e-23 za:Z:xRG:Z:grp2 RG:Z:grp1 +ref1_grp1_p004 147 ref1 37 18 10M = 13 -34 GCAGGCATGC 3333333333 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p005 99 ref1 17 8 10M = 41 34 GGATCCTCTA )))))))))) MD:Z:10 NM:i:0 RG:Z:grp1 ia:i:40000 +ref1_grp1_p005 147 ref1 41 20 10M = 17 -34 GCATGCAAGC 5555555555 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p006 99 ref1 21 10 10M = 45 34 CCTCTAGAGT ++++++++++ MD:Z:10 NM:i:0 RG:Z:grp1 ia:i:255 +ref1_grp1_p006 147 ref1 45 22 10M = 21 -34 GCAAGCTTGA 7777777777 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp2_p001 99 ref1 3 1 8M2S = 27 34 AGCTCGGTAC """""""""" MD:Z:8 NM:i:0 RG:Z:grp2 BC:Z:TGCA H0:i:1 aa:A:A ab:A:Z fa:f:6.67e-11 za:Z:!"$%^&*() ha:H:CAFE +ref1_grp2_p001 2147 ref1 11 1 8H2M = 27 34 AC "" MD:Z:2 NM:i:0 RG:Z:grp2 BC:Z:TGCA H0:i:1 aa:A:A ab:A:Z fa:f:6.67e-11 za:Z:!"$%^&*() ha:H:CAFE +ref1_grp2_p001 147 ref1 27 13 10M = 3 -34 GAGTCGACCT .......... MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p002a 99 ref1 7 3 10M = 31 34 CGGTACCCGG $$$$$$$$$$ MD:Z:10 NM:i:0 fa:f:6.022e+23 RG:Z:grp2 +ref1_grp2_p002 99 ref1 7 3 10M = 31 34 CGGTACCCGG $$$$$$$$$$ MD:Z:10 NM:i:0 fa:f:6.022e+23 RG:Z:grp2 +ref1_grp2_p002 147 ref1 31 15 10M = 7 -34 CGACCTGCAG 0000000000 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p003 99 ref1 11 5 10M = 35 34 ACCCGGGGAT &&&&&&&&&& MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:4294967295 +ref1_grp2_p003 147 ref1 35 17 10M = 11 -34 CTGCAGGCAT 2222222222 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p004 99 ref1 15 7 10M = 39 34 GGGGATCCTC (((((((((( MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-2147483648 +ref1_grp2_p004 147 ref1 39 19 10M = 15 -34 AGGCATGCAA 4444444444 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p005 99 ref1 19 9 10M = 43 34 ATCCTCTAGA ********** MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-1000 +ref1_grp2_p005 147 ref1 43 21 10M = 19 -34 ATGCAAGCTT 6666666666 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p006 99 ref1 23 11 10M = 47 34 TCTAGAGTCG ,,,,,,,,,, MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-1 +ref1_grp2_p006 147 ref1 47 23 10M = 23 -34 AAGCTTGAGT 8888888888 MD:Z:10 NM:i:0 RG:Z:grp2 +ref2_grp3_p001 83 ref2 1 99 15M = 31 45 ATTCTATAGTGTCAC ~~~~~~~~~~~~~~~ MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p001 163 ref2 31 99 15M = 1 -45 CTGTTTCCTGTGTGA ||||||||||||||| MD:Z:0T0A0A1C0A0T0G0G0T0C0A1A0G0 NM:i:13 RG:Z:grp3 +ref2_grp3_p002 99 ref2 46 99 15M = 16 -45 CTGTTTCCTGTGTGA {{{{{{{{{{{{{{{ MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p002 147 ref2 16 99 15M = 46 45 CTAAATAGCTTGGCG }}}}}}}}}}}}}}} MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p003 99 ref2 1 99 15M = 1 15 ACGTMRWSYKVHDBN 0123456789abcd! MD:Z:1T0T0C0T0A0T0A0G0T0G0T0C0A0C0 NM:i:14 RG:Z:grp3 +ref2_grp3_p003 147 ref2 1 99 15M = 1 -15 NVHDBMRSWYKACGT !dcba9876543210 MD:Z:0A0T0T0C0T0A0T0A0G0T0G0T1A0C0 NM:i:14 RG:Z:grp3 +ref12_grp1_p001 97 ref1 36 50 10M ref2 2 0 TGCAGGCATG AAAAAAAAAA MD:Z:10 NM:i:0 RG:Z:grp1 +ref12_grp1_p001 145 ref2 2 50 10M ref1 36 0 TTCTATAGTG BBBBBBBBBB MD:Z:10 NM:i:0 RG:Z:grp1 +ref12_grp2_p001 97 ref1 46 50 10M ref2 12 0 CAAGCTTGAG AAAAAAAAAA MD:Z:10 NM:i:0 RG:Z:grp2 +ref12_grp2_p001 145 ref2 12 50 10M ref1 46 0 TCACCTAAAT BBBBBBBBBB MD:Z:10 NM:i:0 RG:Z:grp2 +unaligned_grp3_p001 77 * 0 0 * * 0 0 CACTCGTTCATGACG 0123456789abcde RG:Z:grp3 diff -r a0d039fa9771 -r a8d69aee190e test-data/bam2fq.004.sam --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/bam2fq.004.sam Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,65 @@ +@HD VN:1.4 SO:queryname +@RG ID:grp1 DS:Group 1 LB:Library 1 SM:Sample +@RG ID:grp2 DS:Group 2 LB:Library 2 SM:Sample +@RG ID:grp3 DS:Group 3 LB:Library 3 SM:Sample +@PG ID:prog1 PN:emacs CL:emacs VN:23.1.1 +@CO The MIT License +@CO +@CO Copyright (c) 2014, 2015 Genome Research Ltd. +@CO +@CO Permission is hereby granted, free of charge, to any person obtaining a copy +@CO of this software and associated documentation files (the "Software"), to deal +@CO in the Software without restriction, including without limitation the rights +@CO to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +@CO copies of the Software, and to permit persons to whom the Software is +@CO furnished to do so, subject to the following conditions: +@CO +@CO The above copyright notice and this permission notice shall be included in +@CO all copies or substantial portions of the Software. +@CO +@CO THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +@CO IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +@CO FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +@CO AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +@CO LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +@CO OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +@CO THE SOFTWARE. +@SQ SN:ref1 LN:56 M5:08c04d512d4797d9ba2a156c1daba468 +@SQ SN:ref2 LN:60 M5:7c35feac7036c1cdef3bee0cc4b21437 +ref1_grp1_p001 99 ref1 1 0 10M = 25 34 CGAGCTCGGT !!!!!!!!!! MD:Z:10 NM:i:0 RG:Z:grp1 BC:Z:ACGT H0:i:1 aa:A:! ab:A:~ fa:f:3.14159 za:Z:Hello world! ha:H:DEADBEEF ba:B:c,-128,0,127 bb:B:C,0,127,255 bc:B:s,-32768,0,32767 bd:B:S,0,32768,65535 be:B:i,-2147483648,0,2147483647 bf:B:I,0,2147483648,4294967295 bg:B:f,2.71828,6.626e-34,2.9979e+09 +ref1_grp1_p001 147 ref1 25 12 10M = 1 -34 TAGAGTCGAC ---------- MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p002 99 ref1 5 2 10M = 29 34 CTCGGTACCC ########## MD:Z:10 NM:i:0 RG:Z:grp1 BC:Z:AATTCCGG H0:i:1 aa:A:a ab:A:z fa:f:4.3597e-18 za:Z:Another string ha:H:2000AD +ref1_grp1_p002 147 ref1 29 14 10M = 5 -34 GTCGACCTGC ////////// MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p003 99 ref1 9 4 10M = 33 34 GTACCCGGGG %%%%%%%%%% MD:Z:10 NM:i:0 fa:f:1.66e-27 RG:Z:grp1 +ref1_grp1_p003 147 ref1 33 16 10M = 9 -34 ACCTGCAGGC 1111111111 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p004 99 ref1 13 6 10M = 37 34 CCGGGGATCC '''''''''' MD:Z:10 NM:i:0 fa:f:1.38e-23 za:Z:xRG:Z:grp2 RG:Z:grp1 +ref1_grp1_p004 147 ref1 37 18 10M = 13 -34 GCAGGCATGC 3333333333 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p005 99 ref1 17 8 10M = 41 34 GGATCCTCTA )))))))))) MD:Z:10 NM:i:0 RG:Z:grp1 ia:i:40000 +ref1_grp1_p005 147 ref1 41 20 10M = 17 -34 GCATGCAAGC 5555555555 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p006 99 ref1 21 10 10M = 45 34 CCTCTAGAGT ++++++++++ MD:Z:10 NM:i:0 RG:Z:grp1 ia:i:255 +ref1_grp1_p006 147 ref1 45 22 10M = 21 -34 GCAAGCTTGA 7777777777 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp2_p001 99 ref1 3 1 8M2S = 27 34 AGCTCGGTAC """""""""" MD:Z:8 NM:i:0 RG:Z:grp2 BC:Z:TGCA QT:Z:abcd H0:i:1 aa:A:A ab:A:Z fa:f:6.67e-11 za:Z:!"$%^&*() ha:H:CAFE +ref1_grp2_p001 2147 ref1 11 1 8H2M = 27 34 AC "" MD:Z:2 NM:i:0 RG:Z:grp2 BC:Z:TGCA H0:i:1 aa:A:A ab:A:Z fa:f:6.67e-11 za:Z:!"$%^&*() ha:H:CAFE +ref1_grp2_p001 147 ref1 27 13 10M = 3 -34 GAGTCGACCT .......... MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p002a 99 ref1 7 3 10M = 31 34 CGGTACCCGG $$$$$$$$$$ MD:Z:10 NM:i:0 fa:f:6.022e+23 RG:Z:grp2 +ref1_grp2_p002 99 ref1 7 3 10M = 31 34 CGGTACCCGG $$$$$$$$$$ MD:Z:10 NM:i:0 fa:f:6.022e+23 RG:Z:grp2 +ref1_grp2_p002 147 ref1 31 15 10M = 7 -34 CGACCTGCAG 0000000000 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p003 99 ref1 11 5 10M = 35 34 ACCCGGGGAT &&&&&&&&&& MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:4294967295 +ref1_grp2_p003 147 ref1 35 17 10M = 11 -34 CTGCAGGCAT 2222222222 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p004 99 ref1 15 7 10M = 39 34 GGGGATCCTC (((((((((( MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-2147483648 +ref1_grp2_p004 147 ref1 39 19 10M = 15 -34 AGGCATGCAA 4444444444 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p005 99 ref1 19 9 10M = 43 34 ATCCTCTAGA ********** MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-1000 +ref1_grp2_p005 147 ref1 43 21 10M = 19 -34 ATGCAAGCTT 6666666666 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p006 99 ref1 23 11 10M = 47 34 TCTAGAGTCG ,,,,,,,,,, MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-1 +ref1_grp2_p006 147 ref1 47 23 10M = 23 -34 AAGCTTGAGT 8888888888 MD:Z:10 NM:i:0 RG:Z:grp2 +ref2_grp3_p001 83 ref2 1 99 15M = 31 45 ATTCTATAGTGTCAC ~~~~~~~~~~~~~~~ MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p001 163 ref2 31 99 15M = 1 -45 CTGTTTCCTGTGTGA ||||||||||||||| MD:Z:0T0A0A1C0A0T0G0G0T0C0A1A0G0 NM:i:13 RG:Z:grp3 +ref2_grp3_p002 99 ref2 46 99 15M = 16 -45 CTGTTTCCTGTGTGA {{{{{{{{{{{{{{{ MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p002 147 ref2 16 99 15M = 46 45 CTAAATAGCTTGGCG }}}}}}}}}}}}}}} MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p003 99 ref2 1 99 15M = 1 15 ACGTMRWSYKVHDBN 0123456789abcd! MD:Z:1T0T0C0T0A0T0A0G0T0G0T0C0A0C0 NM:i:14 RG:Z:grp3 +ref2_grp3_p003 147 ref2 1 99 15M = 1 -15 NVHDBMRSWYKACGT !dcba9876543210 MD:Z:0A0T0T0C0T0A0T0A0G0T0G0T1A0C0 NM:i:14 RG:Z:grp3 +ref12_grp1_p001 97 ref1 36 50 10M ref2 2 0 TGCAGGCATG AAAAAAAAAA MD:Z:10 NM:i:0 RG:Z:grp1 +ref12_grp1_p001 145 ref2 2 50 10M ref1 36 0 TTCTATAGTG BBBBBBBBBB MD:Z:10 NM:i:0 RG:Z:grp1 +ref12_grp2_p001 97 ref1 46 50 10M ref2 12 0 CAAGCTTGAG AAAAAAAAAA MD:Z:10 NM:i:0 RG:Z:grp2 +ref12_grp2_p001 145 ref2 12 50 10M ref1 46 0 TCACCTAAAT BBBBBBBBBB MD:Z:10 NM:i:0 RG:Z:grp2 +unaligned_grp3_p001 77 * 0 0 * * 0 0 CACTCGTTCATGACG 0123456789abcde RG:Z:grp3 diff -r a0d039fa9771 -r a8d69aee190e test-data/bam2fq.005.sam --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/bam2fq.005.sam Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,65 @@ +@HD VN:1.4 SO:queryname +@RG ID:grp1 DS:Group 1 LB:Library 1 SM:Sample +@RG ID:grp2 DS:Group 2 LB:Library 2 SM:Sample +@RG ID:grp3 DS:Group 3 LB:Library 3 SM:Sample +@PG ID:prog1 PN:emacs CL:emacs VN:23.1.1 +@CO The MIT License +@CO +@CO Copyright (c) 2014, 2015 Genome Research Ltd. +@CO +@CO Permission is hereby granted, free of charge, to any person obtaining a copy +@CO of this software and associated documentation files (the "Software"), to deal +@CO in the Software without restriction, including without limitation the rights +@CO to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +@CO copies of the Software, and to permit persons to whom the Software is +@CO furnished to do so, subject to the following conditions: +@CO +@CO The above copyright notice and this permission notice shall be included in +@CO all copies or substantial portions of the Software. +@CO +@CO THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +@CO IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +@CO FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +@CO AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +@CO LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +@CO OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +@CO THE SOFTWARE. +@SQ SN:ref1 LN:56 M5:08c04d512d4797d9ba2a156c1daba468 +@SQ SN:ref2 LN:60 M5:7c35feac7036c1cdef3bee0cc4b21437 +ref1_grp1_p001 99 ref1 1 0 10M = 25 34 CGAGCTCGGT !!!!!!!!!! MD:Z:10 NM:i:0 RG:Z:grp1 BC:Z:AC-GT H0:i:1 aa:A:! ab:A:~ fa:f:3.14159 za:Z:Hello world! ha:H:DEADBEEF ba:B:c,-128,0,127 bb:B:C,0,127,255 bc:B:s,-32768,0,32767 bd:B:S,0,32768,65535 be:B:i,-2147483648,0,2147483647 bf:B:I,0,2147483648,4294967295 bg:B:f,2.71828,6.626e-34,2.9979e+09 +ref1_grp1_p001 147 ref1 25 12 10M = 1 -34 TAGAGTCGAC ---------- MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p002 99 ref1 5 2 10M = 29 34 CTCGGTACCC ########## MD:Z:10 NM:i:0 RG:Z:grp1 BC:Z:AATT+CCGG H0:i:1 aa:A:a ab:A:z fa:f:4.3597e-18 za:Z:Another string ha:H:2000AD +ref1_grp1_p002 147 ref1 29 14 10M = 5 -34 GTCGACCTGC ////////// MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p003 99 ref1 9 4 10M = 33 34 GTACCCGGGG %%%%%%%%%% MD:Z:10 NM:i:0 fa:f:1.66e-27 RG:Z:grp1 +ref1_grp1_p003 147 ref1 33 16 10M = 9 -34 ACCTGCAGGC 1111111111 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p004 99 ref1 13 6 10M = 37 34 CCGGGGATCC '''''''''' MD:Z:10 NM:i:0 fa:f:1.38e-23 za:Z:xRG:Z:grp2 RG:Z:grp1 +ref1_grp1_p004 147 ref1 37 18 10M = 13 -34 GCAGGCATGC 3333333333 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p005 99 ref1 17 8 10M = 41 34 GGATCCTCTA )))))))))) MD:Z:10 NM:i:0 RG:Z:grp1 ia:i:40000 +ref1_grp1_p005 147 ref1 41 20 10M = 17 -34 GCATGCAAGC 5555555555 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p006 99 ref1 21 10 10M = 45 34 CCTCTAGAGT ++++++++++ MD:Z:10 NM:i:0 RG:Z:grp1 ia:i:255 +ref1_grp1_p006 147 ref1 45 22 10M = 21 -34 GCAAGCTTGA 7777777777 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp2_p001 99 ref1 3 1 8M2S = 27 34 AGCTCGGTAC """""""""" MD:Z:8 NM:i:0 RG:Z:grp2 BC:Z:TG+CA QT:Z:ab+cd H0:i:1 aa:A:A ab:A:Z fa:f:6.67e-11 za:Z:!"$%^&*() ha:H:CAFE +ref1_grp2_p001 2147 ref1 11 1 8H2M = 27 34 AC "" MD:Z:2 NM:i:0 RG:Z:grp2 BC:Z:TG-CA H0:i:1 aa:A:A ab:A:Z fa:f:6.67e-11 za:Z:!"$%^&*() ha:H:CAFE +ref1_grp2_p001 147 ref1 27 13 10M = 3 -34 GAGTCGACCT .......... MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p002a 99 ref1 7 3 10M = 31 34 CGGTACCCGG $$$$$$$$$$ MD:Z:10 NM:i:0 fa:f:6.022e+23 RG:Z:grp2 +ref1_grp2_p002 99 ref1 7 3 10M = 31 34 CGGTACCCGG $$$$$$$$$$ MD:Z:10 NM:i:0 fa:f:6.022e+23 RG:Z:grp2 +ref1_grp2_p002 147 ref1 31 15 10M = 7 -34 CGACCTGCAG 0000000000 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p003 99 ref1 11 5 10M = 35 34 ACCCGGGGAT &&&&&&&&&& MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:4294967295 +ref1_grp2_p003 147 ref1 35 17 10M = 11 -34 CTGCAGGCAT 2222222222 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p004 99 ref1 15 7 10M = 39 34 GGGGATCCTC (((((((((( MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-2147483648 +ref1_grp2_p004 147 ref1 39 19 10M = 15 -34 AGGCATGCAA 4444444444 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p005 99 ref1 19 9 10M = 43 34 ATCCTCTAGA ********** MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-1000 +ref1_grp2_p005 147 ref1 43 21 10M = 19 -34 ATGCAAGCTT 6666666666 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p006 99 ref1 23 11 10M = 47 34 TCTAGAGTCG ,,,,,,,,,, MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-1 +ref1_grp2_p006 147 ref1 47 23 10M = 23 -34 AAGCTTGAGT 8888888888 MD:Z:10 NM:i:0 RG:Z:grp2 +ref2_grp3_p001 83 ref2 1 99 15M = 31 45 ATTCTATAGTGTCAC ~~~~~~~~~~~~~~~ MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p001 163 ref2 31 99 15M = 1 -45 CTGTTTCCTGTGTGA ||||||||||||||| MD:Z:0T0A0A1C0A0T0G0G0T0C0A1A0G0 NM:i:13 RG:Z:grp3 +ref2_grp3_p002 99 ref2 46 99 15M = 16 -45 CTGTTTCCTGTGTGA {{{{{{{{{{{{{{{ MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p002 147 ref2 16 99 15M = 46 45 CTAAATAGCTTGGCG }}}}}}}}}}}}}}} MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p003 99 ref2 1 99 15M = 1 15 ACGTMRWSYKVHDBN 0123456789abcd! MD:Z:1T0T0C0T0A0T0A0G0T0G0T0C0A0C0 NM:i:14 RG:Z:grp3 +ref2_grp3_p003 147 ref2 1 99 15M = 1 -15 NVHDBMRSWYKACGT !dcba9876543210 MD:Z:0A0T0T0C0T0A0T0A0G0T0G0T1A0C0 NM:i:14 RG:Z:grp3 +ref12_grp1_p001 97 ref1 36 50 10M ref2 2 0 TGCAGGCATG AAAAAAAAAA MD:Z:10 NM:i:0 RG:Z:grp1 +ref12_grp1_p001 145 ref2 2 50 10M ref1 36 0 TTCTATAGTG BBBBBBBBBB MD:Z:10 NM:i:0 RG:Z:grp1 +ref12_grp2_p001 97 ref1 46 50 10M ref2 12 0 CAAGCTTGAG AAAAAAAAAA MD:Z:10 NM:i:0 RG:Z:grp2 +ref12_grp2_p001 145 ref2 12 50 10M ref1 46 0 TCACCTAAAT BBBBBBBBBB MD:Z:10 NM:i:0 RG:Z:grp2 +unaligned_grp3_p001 77 * 0 0 * * 0 0 CACTCGTTCATGACG 0123456789abcde RG:Z:grp3 diff -r a0d039fa9771 -r a8d69aee190e test-data/bam2fq.010.sam --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/bam2fq.010.sam Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,65 @@ +@HD VN:1.4 SO:queryname +@RG ID:grp1 DS:Group 1 LB:Library 1 SM:Sample +@RG ID:grp2 DS:Group 2 LB:Library 2 SM:Sample +@RG ID:grp3 DS:Group 3 LB:Library 3 SM:Sample +@PG ID:prog1 PN:emacs CL:emacs VN:23.1.1 +@CO The MIT License +@CO +@CO Copyright (c) 2014, 2015 Genome Research Ltd. +@CO +@CO Permission is hereby granted, free of charge, to any person obtaining a copy +@CO of this software and associated documentation files (the "Software"), to deal +@CO in the Software without restriction, including without limitation the rights +@CO to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +@CO copies of the Software, and to permit persons to whom the Software is +@CO furnished to do so, subject to the following conditions: +@CO +@CO The above copyright notice and this permission notice shall be included in +@CO all copies or substantial portions of the Software. +@CO +@CO THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +@CO IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +@CO FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +@CO AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +@CO LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +@CO OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +@CO THE SOFTWARE. +@SQ SN:ref1 LN:56 M5:08c04d512d4797d9ba2a156c1daba468 +@SQ SN:ref2 LN:60 M5:7c35feac7036c1cdef3bee0cc4b21437 +ref1_grp1_p001 99 ref1 1 0 10M = 25 34 CGAGCTCGGT !!!!!!!!!! MD:Z:10 NM:i:0 RG:Z:grp1 BC:Z:ACGT H0:i:1 aa:A:! ab:A:~ fa:f:3.14159 za:Z:Hello world! ha:H:DEADBEEF ba:B:c,-128,0,127 bb:B:C,0,127,255 bc:B:s,-32768,0,32767 bd:B:S,0,32768,65535 be:B:i,-2147483648,0,2147483647 bf:B:I,0,2147483648,4294967295 bg:B:f,2.71828,6.626e-34,2.9979e+09 +ref1_grp1_p001 147 ref1 25 12 10M = 1 -34 TAGAGTCGAC ---------- MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p002 99 ref1 5 2 10M = 29 34 CTCGGTACCC ########## MD:Z:10 NM:i:0 RG:Z:grp1 BC:Z:AATTCCGG H0:i:1 aa:A:a ab:A:z fa:f:4.3597e-18 za:Z:Another string ha:H:2000AD +ref1_grp1_p002 147 ref1 29 14 10M = 5 -34 GTCGACCTGC ////////// MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p003 99 ref1 9 4 10M = 33 34 GTACCCGGGG %%%%%%%%%% MD:Z:10 NM:i:0 fa:f:1.66e-27 RG:Z:grp1 +ref1_grp1_p003 147 ref1 33 16 10M = 9 -34 ACCTGCAGGC 1111111111 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p004 99 ref1 13 6 10M = 37 34 CCGGGGATCC '''''''''' MD:Z:10 NM:i:0 fa:f:1.38e-23 za:Z:xRG:Z:grp2 RG:Z:grp1 +ref1_grp1_p004 147 ref1 37 18 10M = 13 -34 GCAGGCATGC 3333333333 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p005 99 ref1 17 8 10M = 41 34 GGATCCTCTA )))))))))) MD:Z:10 NM:i:0 RG:Z:grp1 ia:i:40000 +ref1_grp1_p005 147 ref1 41 20 10M = 17 -34 GCATGCAAGC 5555555555 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp1_p006 99 ref1 21 10 10M = 45 34 CCTCTAGAGT ++++++++++ MD:Z:10 NM:i:0 RG:Z:grp1 ia:i:255 +ref1_grp1_p006 147 ref1 45 22 10M = 21 -34 GCAAGCTTGA 7777777777 MD:Z:10 NM:i:0 RG:Z:grp1 +ref1_grp2_p001 99 ref1 3 1 8M2S = 27 34 AGCTCGGTAC """""""""" MD:Z:8 NM:i:0 RG:Z:grp2 BC:Z:TGCA QT:Z:abcd H0:i:1 aa:A:A ab:A:Z fa:f:6.67e-11 za:Z:!"$%^&*() ha:H:CAFE +ref1_grp2_p001 2147 ref1 11 1 8H2M = 27 34 AC "" MD:Z:2 NM:i:0 RG:Z:grp2 BC:Z:TGCA H0:i:1 aa:A:A ab:A:Z fa:f:6.67e-11 za:Z:!"$%^&*() ha:H:CAFE +ref1_grp2_p001 147 ref1 27 13 10M = 3 -34 GAGTCGACCT .......... MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p002a 99 ref1 7 3 10M = 31 34 CGGTACCCGG $$$$$$$$$$ MD:Z:10 NM:i:0 fa:f:6.022e+23 RG:Z:grp2 +ref1_grp2_p002 99 ref1 7 3 10M = 31 34 CGGTACCCGG $$$$$$$$$$ MD:Z:10 NM:i:0 fa:f:6.022e+23 RG:Z:grp2 +ref1_grp2_p002 147 ref1 31 15 10M = 7 -34 CGACCTGCAG 0000000000 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p003 99 ref1 11 5 10M = 35 34 ACCCGGGGAT &&&&&&&&&& MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:4294967295 +ref1_grp2_p003 147 ref1 35 17 10M = 11 -34 CTGCAGGCAT 2222222222 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p004 99 ref1 15 7 10M = 39 34 GGGGATCCTC (((((((((( MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-2147483648 +ref1_grp2_p004 147 ref1 39 19 10M = 15 -34 AGGCATGCAA 4444444444 MD:Z:10 NM:i:0 RG:Z:grp2 OQ:Z:9999999999 +ref1_grp2_p005 99 ref1 19 9 10M = 43 34 ATCCTCTAGA ********** MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-1000 +ref1_grp2_p005 147 ref1 43 21 10M = 19 -34 ATGCAAGCTT 6666666666 MD:Z:10 NM:i:0 RG:Z:grp2 +ref1_grp2_p006 99 ref1 23 11 10M = 47 34 TCTAGAGTCG ,,,,,,,,,, MD:Z:10 NM:i:0 RG:Z:grp2 ia:i:-1 OQ:Z:1111111111 +ref1_grp2_p006 147 ref1 47 23 10M = 23 -34 AAGCTTGAGT 8888888888 MD:Z:10 NM:i:0 RG:Z:grp2 +ref2_grp3_p001 83 ref2 1 99 15M = 31 45 ATTCTATAGTGTCAC ~~~~~~~~~~~~~~~ MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p001 163 ref2 31 99 15M = 1 -45 CTGTTTCCTGTGTGA ||||||||||||||| MD:Z:0T0A0A1C0A0T0G0G0T0C0A1A0G0 NM:i:13 RG:Z:grp3 +ref2_grp3_p002 99 ref2 46 99 15M = 16 -45 CTGTTTCCTGTGTGA {{{{{{{{{{{{{{{ MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p002 147 ref2 16 99 15M = 46 45 CTAAATAGCTTGGCG }}}}}}}}}}}}}}} MD:Z:15 NM:i:0 RG:Z:grp3 +ref2_grp3_p003 99 ref2 1 99 15M = 1 15 ACGTMRWSYKVHDBN 0123456789abcd! MD:Z:1T0T0C0T0A0T0A0G0T0G0T0C0A0C0 NM:i:14 RG:Z:grp3 +ref2_grp3_p003 147 ref2 1 99 15M = 1 -15 NVHDBMRSWYKACGT !dcba9876543210 MD:Z:0A0T0T0C0T0A0T0A0G0T0G0T1A0C0 NM:i:14 RG:Z:grp3 +ref12_grp1_p001 97 ref1 36 50 10M ref2 2 0 TGCAGGCATG AAAAAAAAAA MD:Z:10 NM:i:0 RG:Z:grp1 +ref12_grp1_p001 145 ref2 2 50 10M ref1 36 0 TTCTATAGTG BBBBBBBBBB MD:Z:10 NM:i:0 RG:Z:grp1 +ref12_grp2_p001 97 ref1 46 50 10M ref2 12 0 CAAGCTTGAG AAAAAAAAAA MD:Z:10 NM:i:0 RG:Z:grp2 +ref12_grp2_p001 145 ref2 12 50 10M ref1 46 0 TCACCTAAAT BBBBBBBBBB MD:Z:10 NM:i:0 RG:Z:grp2 +unaligned_grp3_p001 77 * 0 0 * * 0 0 CACTCGTTCATGACG 0123456789abcde RG:Z:grp3 diff -r a0d039fa9771 -r a8d69aee190e test-data/bc.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/bc.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,12 @@ +@ref1_grp1_p001 +GT ++ +"" +@ref1_grp1_p002 +TT ++ +"" +@ref1_grp2_p001 +CA ++ +cd diff -r a0d039fa9771 -r a8d69aee190e test-data/bc10.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/bc10.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,12 @@ +@ref1_grp1_p001 +GT ++ +"" +@ref1_grp1_p002 +TT ++ +"" +@ref1_grp2_p001 +CA ++ +cd diff -r a0d039fa9771 -r a8d69aee190e test-data/bc_split.fq.expected --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/bc_split.fq.expected Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,12 @@ +@ref1_grp1_p001/1 +GT ++ +"" +@ref1_grp1_p002/1 +CCGG ++ +"""" +@ref1_grp2_p001/1 +CA ++ +cd diff -r a0d039fa9771 -r a8d69aee190e test-data/samtools_fastx-out1-1.fasta.gz Binary file test-data/samtools_fastx-out1-1.fasta.gz has changed diff -r a0d039fa9771 -r a8d69aee190e test-data/samtools_fastx-out1-2.fasta.gz Binary file test-data/samtools_fastx-out1-2.fasta.gz has changed diff -r a0d039fa9771 -r a8d69aee190e test-data/samtools_fastx-out1-3.fasta.gz Binary file test-data/samtools_fastx-out1-3.fasta.gz has changed diff -r a0d039fa9771 -r a8d69aee190e test-data/samtools_fastx-out1.fasta --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/samtools_fastx-out1.fasta Fri Sep 28 04:39:19 2018 -0400 @@ -0,0 +1,800 @@ +>chrM_101_581_3:0:0_1:0:0_45/1 +GAGGTAAAATTACACATGCAAACCTCCATAGACCGGAGAAAAATCCCTTAAAGATTTACTTAAAATTTAA +>chrM_101_581_3:0:0_1:0:0_45/2 +TTTTAAGCTATGGCTAGTAGTTCTCTGGCAAATATTTTTGTTAAATTTAATTATTTAGGTTTATGGCTAA +>chrM_271_788_1:2:0_0:1:0_73/1 +TAGCCCATTTCTTCCCATTGCATTGGCTACACCTTGACCTAACGTTTTTATGTTTGATTCTTTTGCTTAC +>chrM_271_788_1:2:0_0:1:0_73/2 +TGACTAAGTTATACCTCTTAGGGTTGGCAAATTTCGTGCCAGCCACCTCGTTCATACGATTAACCCAAAC +>chrM_296_703_3:1:0_0:1:0_b/1 +GGGTTTGCTGAAGATGGCGGTATATAGGCTGAATTAGCAAGTGATGGTGAGGTAGAGCGGGGTTTATCGA +>chrM_296_703_3:1:0_0:1:0_b/2 +TTTAAATTTCGTGCCAGCCACCTGGGTCATACGATTAACCCAAACTAATTATCTTCGGCGTAAAACGTGT +>chrM_317_794_1:3:0_0:1:0_18/1 +CTCGGTCATACGATTAACCCAAACTAAATATTTTCGGCGTAAAACGTGTCATCTATAAATAAATAAATAG +>chrM_317_794_1:3:0_0:1:0_18/2 +AAAATGTAGCCCATTTCTTCCCATTGCATTGGCTACACCTTGACCTAACGTTTTTATGTTTGATTCTTTT +>chrM_408_812_0:2:1_4:2:0_ad/1 +TGAAAAATCATTGTTAGGACCTAAACCGTCAATAACGAAAGTAATTCTACTCATTTATAATACACGACAG +>chrM_408_812_0:2:1_4:2:0_ad/2 +GAAATGTTCTGTTATAAGAAAATGACGCCCATTTCTTCCCATTGCATTGGCTCCACCTTGACCTAACGTT +>chrM_424_929_1:0:1_1:1:0_4a/1 +GGACCTAAACCGTCAATAACGAAAGTAATTCTAGTCATTTATAATCCACGACAGCTAAGACCCAAACTGG +>chrM_424_929_1:0:1_1:1:0_4a/2 +TAATTTGAGGAGGGTGACTGGCGGTGTGTGCGTACTTCATTGCTCAATTCAATTAAGCTCCCTATTCTTA +>chrM_769_1311_4:2:0_1:0:0_9b/1 +CAAAGGGAAGACATGGGGTACATTTTCTTATAACAGAACATTACTATCCCCTTTATGAAACTAAAGGACT +>chrM_769_1311_4:2:0_1:0:0_9b/2 +TTAGTTAGAAGTTTTCTAGTTAGTTCATTATGCAAAAGGAACAAGGTTTAATCTTTGCTTGTTCTTACTT +>chrM_826_1305_2:0:0_0:0:0_63/1 +AGAAGTTTTCTAGTTAGTTCATTATGCAAAAGGTACAAGGTTTAATCTTTGCTTGTTCTTACTTTTAATT +>chrM_826_1305_2:0:0_0:0:0_63/2 +AAACTAAAGGACTAAGGAGGATTTAGTAGTAACTTAAGAATAGAGAGCTTAATTGAATTGAGGAATGAAG +>chrM_946_1374_2:0:1_1:0:0_b7/1 +GTTGATTCATAAAATTGTTTTTAGGTAGGTCGTTTGGTTTCGGGGTTTCTAGCTGTAATTCTTTTAGTTA +>chrM_946_1374_2:0:1_1:0:0_b7/2 +CTTATTTCTAGACATCCGTTTCTGAGAGGAGATAAGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTT +>chrM_1166_1638_1:0:0_3:1:0_54/1 +AGAATTGGAGAAAGAAATTCGTACATCTAGGAGCTATAGAACTAGTACCGCAAGGGAAAGATGAAAGACT +>chrM_1166_1638_1:0:0_3:1:0_54/2 +ATCGCATTCTTTATTGGTGGCTGCTTATAGGCCTCCAATGGTTAAAAGCTGTTTTGTTAATTATTCACTA +>chrM_1187_1670_2:0:0_1:1:0_5/1 +TACATCTAGGAGCTATAGAACTAGAACCGCAAGGGAAAGATGAAAGCCTAATTAAAAGTAAGAACAAGCA +>chrM_1187_1670_2:0:0_1:1:0_5/2 +ATGGAATTAATTGAAATTTTATTTTGAGCTTGATCGCTTTCTTTATTGGTGGCTGCTTTTAGGCCTACAA +>chrM_1366_1837_1:0:0_0:0:0_24/1 +ATTTATAGTGTGATTATTGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTTATACGCGTATG +>chrM_1366_1837_1:0:0_0:0:0_24/2 +TGAATCAACTCGTCTATGTGGCAAAATAGTGAGACGATTTTTAGGTAGAGGTGAAAAGCCTAACGAGCTT +>chrM_1396_1891_4:1:0_3:0:0_55/1 +GAGAAGATTTTTAGGTAGAGGTGAAACGCCTACCGAGCTTGTTGATAGCTTGTTACCCAAAAAGTGAATT +>chrM_1396_1891_4:1:0_3:0:0_55/2 +ATCTTTCCTATAGGCATTCCGGATTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTA +>chrM_1461_2059_1:2:0_0:0:0_8f/1 +GAATTTAAGTTCAATTATAAACTTGCTGAAAAAAGAACAAAATCAAAAAGTAAGTTTAGATTATAGCCAA +>chrM_1461_2059_1:2:0_0:0:0_8f/2 +CCCTAATTAAGGAACAAGTGATTATGCTACCTTTGCACGGTCAGGATACCGCGGCCGTTAAACTTTAGTC +>chrM_1654_2097_0:1:0_1:0:0_a8/1 +AGAGACAGTTGGACCCTCGTTTAGCCGTTCATGCTAGTCCCTAATTAAGGACCAAGTGATTATGCTACCT +>chrM_1654_2097_0:1:0_1:0:0_a8/2 +ATTTCAATTAATTCCATAATCTACACCAACTTCCTAAACTTAAAATTGGGTTAATCTATAACTTTATAGA +>chrM_1772_2275_1:0:0_1:0:0_3f/1 +ATTTTTATTCTCCGAGGTCACCCCAACCGAAATTTCAAACTTATACTATAGTTTTTGGGCCATTAGGTTT +>chrM_1772_2275_1:0:0_1:0:0_3f/2 +CGCGTATAACAACTCGGATAACCATTGTTAGTTAATCAGACTATAGGCAATAATCACACTATACATAATC +>chrM_2021_2595_3:0:0_2:0:0_22/1 +AAGGTGGCTCTATTTCTCTTGACCTTTCGTACTGGGAGAAATCGTAAATAGATAGAAACCGACCAGGATT +>chrM_2021_2595_3:0:0_2:0:0_22/2 +CGTGCAACGGTAGCATAATCACTTGTTCCTTAATTAGGGACTAGCATGAACGGCTCAACGAGGGTCCACC +>chrM_2195_2667_1:0:0_2:0:0_95/1 +TTTAATTTATTAAACCTAATGGCCCAAAAACTATAGTCTAAGTTTGAAATTTCGGTTGGGGTGACCTCGG +>chrM_2195_2667_1:0:0_2:0:0_95/2 +GTAGGTTAGAGGGTGTACGTATATATTTTATTTAGATTTTATTCATAAATTAAGTTGAGAGCGCTTATAT +>chrM_2674_3159_3:1:0_1:1:1_e/1 +CTACGGCTCGTAAAGCTCCGATTAGTGAGAATTTGGAGTTTGAGGCTCATCCTGATCAAGAATGGAGTAA +>chrM_2674_3159_3:1:0_1:1:1_e/2 +TTATTGGGGTGGCAGAGCCATGAAATTGCGTAAGACTAAAAACCTTGTTCCCAGAGGTTCAAATGCTCTC +>chrM_2706_3137_0:1:0_1:0:1_af/1 +AGACTTAAAACCTTGTTCCCAGAGGTTCAAATCCTCTCCCTAATAGTGTTCTTTATTATTATCCTAACAC +>chrM_2706_3137_0:1:0_1:0:1_af/2 +TAGTGAGTATTTGGAGTTTGAGGCTCATCCTGATCAAGAATGGAGTAAACTGCTAGGCTAGATGTTGCTA +>chrM_2740_3253_1:1:0_1:1:0_6c/1 +GTTGTAATAAGTGTTTTTAGAGAGTAGAATCCATTTATTAATAGAACTGATAAAAGGATAATAGCTATGG +>chrM_2740_3253_1:1:0_1:1:0_6c/2 +TCTCCCTAAAAGTGTTCTTTATTATTATCCTAACACTCCTCGTCCCCATTCTAATCGCCATAGCCTTCCT +>chrM_2789_3314_1:0:0_0:1:0_f/1 +TCTAATCGCCATAGCCTTCCTCACATTAGTAGAACGCAAAATCTTAGGGTACATACAACTACGAAAAGGC +>chrM_2789_3314_1:0:0_0:1:0_f/2 +TGAGATATATCATATTATGGCTATGGGTCAGGCTGGCAGAAGTAATCATATGTGTTCTTGGGTTGTAATA +>chrM_2945_3338_1:0:0_1:1:0_19/1 +GGCCCGGTTTGTTTCTGCTAGGGTTGAGATATATCATATTATGGCTATGGGTCAGGCTGGCAGACGTAAT +>chrM_2945_3338_1:0:0_1:1:0_19/2 +AACCTCTATATCCTTATTTATTATAGCACCTACCCTATCACTCACACTAGCATTAAGTCTATGAGTTCCC +>chrM_3103_3621_2:1:0_1:0:0_71/1 +GATCAGGATGATCCTCAAACTCCAAATCCTCACTAATCGGAGCTTTACGAGCCGTAGCCCAAACAATTTC +>chrM_3103_3621_2:1:0_1:0:0_71/2 +TTCATAGAAGATGTATAAGTTGATCGTAACGGAAGCGTGGCTAAGATGCTCGGATCCATAGGAATGTTGA +>chrM_3135_3669_1:2:0_1:0:0_2c/1 +AAGAAATATGTCACATACATAATGCTAGAGTTAGGGGTAGAAAGTTTTTTCATAGAAGATGTATAAGTTG +>chrM_3135_3669_1:2:0_1:0:0_2c/2 +GTAATCGGAGCTTTACGAGCCGTAGCCCAAACAATTTCATATGATGTAACCATAGCTATTATCCTTTTAT +>chrM_3169_3659_1:2:0_2:0:0_68/1 +TTTCATATGATGTAACCATAGCTATTATCCTTTTAACAGTTCTATTAATAAATGGATTCTACTCTCTACA +>chrM_3169_3659_1:2:0_2:0:0_68/2 +TCACATACATCATTCTAGTGTTAGGGGTAGAAAGTTTTTTCATAGAAGATGTATAAGTTGATCGTAACGG +>chrM_3187_3702_2:1:0_1:1:0_8d/1 +TAGCTATTCTCCTTTTATCAGTTCTATTAATAAATGGATTCTACTCTCTACAAACACTTATTACAACCGA +>chrM_3187_3702_2:1:0_1:1:0_8d/2 +TGTATGGTGGCACTCCGGCTGTAAAAATTGGTAAAGAAATATGTCACATACATAATGCTAGTGTTAGGGG +>chrM_3204_3728_0:1:0_2:2:0_4b/1 +TCAGTTCTATTAATAAATGGATTCTACTCTCTACAAACACTTATTACAACCCAAGAACACATATGATTAC +>chrM_3204_3728_0:1:0_2:2:0_4b/2 +ATTCTTTTATCAGACATATTTCTATATGTCTGGTGGCACTCCCGCTTTAAAAATTGGTAAAGCAATATGT +>chrM_3289_3819_1:1:0_4:1:0_3c/1 +CCAAAGCCATAATATGATATATCTCAACCCTAGCAGAAACAAACCGGGCCCCCTTCGACCTGACAGAAGG +>chrM_3289_3819_1:1:0_4:1:0_3c/2 +AGGAGAATTTTGAAATCTTAATTGTAGGTTCAATTCCTAATGTCCTAGAAATAAGCGGGCTTGAACCTCT +>chrM_3422_3872_1:0:0_2:1:0_3b/1 +CCCTATAGCTTAATTAGCTGACCTTAGTATTAGGATAAGGTGTTTAGGTAGCAAGGAGAATTTTGAATTC +>chrM_3422_3872_1:0:0_2:1:0_3b/2 +TATAGCAGAGTACACTAACATTATTCTAATAAACGCCCTAACAACTATAATCTTCCTAGGACCCCTATAC +>chrM_3504_4052_0:0:0_0:2:0_b9/1 +CCAGAACTCTACTCAACTAACTTCATAATAGAAGCTCTACTACTATCATCAACATTCCTATGGATCCGAG +>chrM_3504_4052_0:0:0_0:2:0_b9/2 +TGTTGATTAGTATGGGGATAATTGCTAGTAGGCTGAATTCCAGGCATACTCATATCAGTATTAGGTTGGT +>chrM_3542_4113_1:0:0_0:0:0_65/1 +ACTACTATCATCAACATTCCTATGGATCCGAGCATCTTATCGACGCTTCCGTTACGATCAACTTATACAT +>chrM_3542_4113_1:0:0_0:0:0_65/2 +GAGGCTGTTGCTTGTGTGACGAAGTATTTTGTTGCTGCTTCAGTTGATCGTGGGTTTTTTTTGTTGATTA +>chrM_3560_4153_2:0:0_1:0:0_4f/1 +CCTATGGATCCGAGCATCTTATGCACGCTTCCGTTACGATCAACTTATACATCTTCTATGAAAAAACATT +>chrM_3560_4153_2:0:0_1:0:0_4f/2 +TTGTTTATAGTTGAGTACGATGGCCAGGAGGATACTTATTGAGGCTGTTGCTTGTGTGACGAAGTATTTT +>chrM_3562_4117_0:0:0_3:0:0_51/1 +TATGGATCCGAGCATCTTATCCACGCTTCCGTTACGATCAACTTATACATCTTCTATGAAAAAACTTTCT +>chrM_3562_4117_0:0:0_3:0:0_51/2 +TCTTGAGGCTGATGCTTGTGTGACGAAGTATTTTGTTGCTTCTTCAGTTGATCGTGGGTTTTTTTTGTTG +>chrM_3587_4003_0:0:0_1:1:0_a7/1 +TCATATCAGTATTAGGTTGGTGCTGGATATTGTGATTACAGGACCTAATAAGATTGTGAAGTAGATGATG +>chrM_3587_4003_0:0:0_1:1:0_a7/2 +CTTCCGTTACGATCAACTTATACATCTTCTATGAAAAAACTTTCTACCCCTAACACTAGCATTATGTATG +>chrM_3799_4278_3:2:0_1:0:0_1d/1 +TTAAGAATTCAAAATTCTGCTAGCTACCAAAACACCTTATCCTGATAGTAAGGTCAGCTAATTAAGCTAT +>chrM_3799_4278_3:2:0_1:0:0_1d/2 +ATCCCTTGAGTTACTTCTGGTAATCAGAAGTGGAATGGTGCGAGGCCTAGTTTTATGGATAGGGCTATTA +>chrM_3889_4361_3:0:0_3:0:0_33/1 +TGAGTAGCGGGTAAATTTGACTTAAAATTGAAAGGGGCGCAATTTTTTGTCATGTAAGAAGAATAAGTCC +>chrM_3889_4361_3:0:0_3:0:0_33/2 +TTTTGTATAAATCCTTCCCGTACTAATAAATCCTATCACCCTTGCCATCATCTACTTCACAATCTTCTTA +>chrM_3912_4414_3:0:0_2:1:0_91/1 +TCATGCCCCAATGAAAATAGAAGTAAATGCTAGTATTAAAATGATAGTAGAGTTGAGTATCGGGTAAATT +>chrM_3912_4414_3:0:0_2:1:0_91/2 +TAATAAATCCTATCACCCTTGCCAACATCTAGTTCACAATCTTCTTAGGTCCTGTAATCACAAAATCCAG +>chrM_3945_4422_1:2:0_0:1:0_64/1 +AGTCCTCCTCATGCCCCAATGAAAATAGAAGTAATTGCTAGTATTAAAATGATAGTAGAGTTGAGTAGCG +>chrM_3945_4422_1:2:0_0:1:0_64/2 +TCACAATCTTCTTAGGTCCTGTAATCACAATATCCAGGACCAACCTAATACTGATATGAGTATGCCTGGA +>chrM_3998_4489_2:1:0_1:1:0_be/1 +ATATGAGAAGGCCTGGAATTCCGCCAACTAGCAATTATCCCCATACTAATCAACAAAAAAAACCCACGAT +>chrM_3998_4489_2:1:0_1:1:0_be/2 +TGCTAATATTCATCCTATGTGGGCAATTGATGAATAGGGTATAATTTTTCGTATTTGTGTTTGGTTAAAT +>chrM_4007_4449_2:0:0_3:1:0_17/1 +GTCCTGGAATTCAGCCTACTAGCACTTATCCCCATACTAATCAACAAAAAAAACCCACGATCAACTGAAG +>chrM_4007_4449_2:0:0_3:1:0_17/2 +ATAATTTTTCGTATTTGTGTTTGGTTAAATCGTCCTGATGCCCCTATGAAAATAGAAGTACTTGCTAGTA +>chrM_4079_4594_1:0:0_3:0:0_28/1 +GATGGTTATAGCGTTATTTAGTATAAGTGCTATGAATCTAGGGGCTGTAAGAATCATATAGATTATGAGG +>chrM_4079_4594_1:0:0_3:0:0_28/2 +GCAACAAAATACTTCGTCACACAAGCAACAGCCTGAATAATTATCCTCCTGGCCATCGTACTCAACTATA +>chrM_4139_4621_1:0:0_4:0:0_7e/1 +CTCAACTATAAACAACTAGGAACATGAATATTTCAACAACAAACAAACTGTCTTATCCTTAACATAACAT +>chrM_4139_4621_1:0:0_4:0:0_7e/2 +TTTATTTCATAGAAGTGCGATTGAGTTGATGGATATAGATTTATTTAGTATAAGTGCTAAGAATATAGGG +>chrM_4140_4598_2:0:0_2:0:0_12/1 +AGATGATGGTTATAGAGTTATTTAGTATAAGTGCTATGAATAAAGGGGCTGTAAGAATAATATAGATTAT +>chrM_4140_4598_2:0:0_2:0:0_12/2 +TCAACTATAAACAACTAGGAACATGAATATTTCAACAAGAAACAAACGGTCTTATCCTTAACATACCATT +>chrM_4200_4733_4:0:0_0:1:0_6f/1 +ACATCAGATTAATAGCCCTAACCATAAAACTAGGCCTCGCCCCATTCCACTACTGATTACCAGAAGTAAC +>chrM_4200_4733_4:0:0_0:1:0_6f/2 +GGTTTTTTATAAGTTCTGTGATGATAATTCATTTTGGTAAGAATCCTGTTAGTGGTGGAAGGCCTCCTAG +>chrM_4256_4777_1:0:0_2:2:0_66/1 +TTACCAGAAGTAACTCAAGGGATCCCACTGCACATAGGACTTATTCTTGTTACATGACAAAAAATTGCTC +>chrM_4256_4777_1:0:0_2:2:0_66/2 +TAGTAGAGCTACTATTGCTATGAGTGTTGCAATAATTAGACAGTGGTTTTTTATAAGTTCTGTGATGATA +>chrM_4306_4893_3:0:0_3:1:0_83/1 +GAAAATATTAGGTTATGTTTAGTTTTTGTTTGGTGAGTTATTAATTTTGAGTTATTGTTGGTTGGCAATA +>chrM_4306_4893_3:0:0_3:1:0_83/2 +TACATGACAAAAAATTGCTCCCCTATCAATTTTAAATCAAATTTACCCGCTACTCAACTGAACTATCATT +>chrM_4354_4860_0:1:0_1:0:1_b1/1 +GCTACTCAACTCTACTATCATTTTAATACTAGCAATTACTTCTATTTTCATAGGGGCATGAGGAGGATTT +>chrM_4354_4860_0:1:0_1:0:1_b1/2 +TGAGTTATTATTTTTGAGTTAATGTTGGTTGGAAATATTGTTAGTGAAGTGGAATAAATTAGGCGCAAGT +>chrM_4383_4859_1:1:0_0:0:1_90/1 +TAGCAATTACTTCTATTTTCATAGGGGCATTAGGAGGATTTAACCAAACACAAATACGAAAAATTATAGC +>chrM_4383_4859_1:1:0_0:0:1_90/2 +GAGTTATTATTTTTGAGTTATTGTTGGTTGGAAATATTGTTAGTGAAGTGGAATAAATTAGGCGCAAGTA +>chrM_4425_4987_2:0:0_2:3:0_35/1 +GCTTTGATTGCTCGCGGACTGGTAAATCCTAACCTTCTAGGTAATTAGTTGGGGGGCTAGGGGTAGGGTT +>chrM_4425_4987_2:0:0_2:3:0_35/2 +ACCAAACACAAATACGACAAATTCTAGCCTATTCATCAATTGCCCACATAGGATGAATATTAGCAATTCT +>chrM_4427_4991_1:0:0_3:3:0_7/1 +CAAACACAAATACGAAAAATTATAGCCTATTCATCAATTGCCCACCTAGGATGAATATTAGCAATTCTTC +>chrM_4427_4991_1:0:0_3:3:0_7/2 +TATTGCTTTGATGGGTCGCGGACTGGTATATCCTAACCTTCTAGGTAATTAGTTGGGGGGCTAGGGGTAG +>chrM_4480_4986_1:1:0_2:3:0_98/1 +AAAATTAGCAATTCTTCCTTACAACCCATCCCTCACTCTACTCAACCTCATAATGTATATTATTCTTACA +>chrM_4480_4986_1:1:0_2:3:0_98/2 +CTTTGATGGCTCGCTGACTGGTAAATCCTAACCTTCTAGGTAATTAGTTGGGGGGCTAGGGGTAGGGTTA +>chrM_4484_4978_1:2:0_1:2:0_3d/1 +GCTCGCGGACTGGTATATCCTAACCTTCTAGGTAATTAGTTGGGGGGCTCGGGGTAGGGTTATTGTGCTT +>chrM_4484_4978_1:2:0_1:2:0_3d/2 +TTAGCAATTCTTCCTTAGAACCCATCCCTCACTCTACTCAACCTCATAATGTATATTATTCTTACATCCC +>chrM_4491_4937_1:0:0_1:1:0_5e/1 +TTCTTCCTTACAACCCATCCCTCACTCAACTCAACCTCATAATCTATATTATTCTTACAGCCCCTATATT +>chrM_4491_4937_1:0:0_1:1:0_5e/2 +GGGGGGCTAGGGGTAGGGTTATTGTGCTTATGATAGCTAGGGTGGAAAATATTAGGTTAGGTATAGTTTT +>chrM_4627_5166_2:0:0_2:1:0_13/1 +AGCAATACTACCTATAATCTCAGTGATATTACTATCCCTAGGAGGCCTTCCACCACTAACAGGATTCTTA +>chrM_4627_5166_2:0:0_2:1:0_13/2 +GTATAAGTAGATTGAAGCCAGTAATAGGGTATTTAGCTGTTACCTAAATTTTCGTCGGTTTAATTCCTGC +>chrM_4810_5337_0:1:0_0:3:0_9c/1 +CACTTCACTAACAATATTTCCAACCAACAATAACTCAAAAATAATAACTCACCAAACAAAAACTAAACCT +>chrM_4810_5337_0:1:0_0:3:0_9c/2 +TAATCAACATAGGTAAAATGGCTGAGTAAGCATTAGACTGTAATTCTAAACACAGAGGTTTAAAACCTCT +>chrM_4842_5304_1:1:0_0:2:0_41/1 +CCTCAAAAATAATAACTCACCAAACAAAAACTAAACCTAACCTAATATTTTCCACCCTAGCTATCATAAG +>chrM_4842_5304_1:1:0_0:2:0_41/2 +TAGACTGTAATTCTAAACACAGAGGTTTAAAACCTCTTTTTACCAGAGGTCTTAAGGTGATATTCATGTC +>chrM_4918_5435_0:2:0_1:1:0_74/1 +TAAAATACTTAGTGCAGTACCCACTATTCCCGCTCAGGCTCCGAATAGTAGAAAGAGGGTTCGGATATCT +>chrM_4918_5435_0:2:0_1:1:0_74/2 +AACCCTACCCCTAGCCCCCCAACTAATTACCTAGAAGGTTAGGATATACCAGTCCGCGAGCCTTCAAAGC +>chrM_5340_5854_0:1:0_0:0:0_a/1 +ATGGCTGGGGGTTTCATGTTGATAATAGTGGTAATAAAATTAATTGCACCTAAAATAGATGACACTCCAG +>chrM_5340_5854_0:1:0_0:0:0_a/2 +CGTTGATTAGTCTCAACCAATCACAAAGATATCGGAACCCTCTATCTACTATTCGGAGCCTGAGCGGGAA +>chrM_5403_5984_0:0:0_1:2:0_ab/1 +GAAAGTTTTGTTTAGGTTGCGGTGTGTTAGTAGTATAGTAATGCCTGCGGCTAACACTGGTAGTGATAAT +>chrM_5403_5984_0:0:0_1:2:0_ab/2 +GCGGGAATAGTGGGTACTGCACTAAGTATTTTAATTCGAGCAGAATTAGGTCAACCAGGTGCACTTTTAG +>chrM_5451_5933_2:1:0_1:1:0_57/1 +TAACACTTGTAGTGATAATAGGAGCAGTACGGCTGTAATAAGTACGGATCAGACAAATAGTGGAGTTTGA +>chrM_5451_5933_2:1:0_1:1:0_57/2 +GGTCAACCAGGTGCACTTTTAGGAGATGACCAAAAATACCATGTTATCGTAACTGCCCATGCTTTTGTTA +>chrM_5499_5905_2:3:0_1:0:0_2f/1 +ACGGGTGTAATAAGTACGGATCAGACAAATAGTGGAGTTTGATACTGTGTTATGGCTGGGGGTTTCATGT +>chrM_5499_5905_2:3:0_1:0:0_2f/2 +GTAACTGCCCATGCTTTTGTAATAATTTTCTTCCTAGTAATACCAATAATAATTGGGGGCATTGGCAACT +>chrM_5540_5928_2:2:0_1:0:0_2d/1 +ACCAATAATAATTGGTGGCTTTGGCAACTGACTTGTCCCACTAATAATCGTAGCCCCAGATATAGCATTC +>chrM_5540_5928_2:2:0_1:0:0_2d/2 +CTGGTAGTGATAATAGGAGCAGTACGGCTGTAATAAGTACGGATCCGACAAATAGTGGAGTTTGATACTG +>chrM_5583_6032_2:0:0_3:1:0_2b/1 +ATACTCGGAGCCCCAGATATAGCATTCCCACGAATAAATAATATAAGTTTTTGAGTCCTACCACCATCAT +>chrM_5583_6032_2:0:0_3:1:0_2b/2 +GAACAGATGCTGGTAGAGAATTGTGTCCCCTCCTCCCGCGGGATCACAGAAAGTTGTGTTTAGGTTGCTG +>chrM_5615_6110_2:1:0_0:3:0_14/1 +GTAGTAAGTAACTACATGTGAAATAATTCCAAATCCTGGGAGGATAAGAAAAAAAACTTCTGGGTGCCCC +>chrM_5615_6110_2:1:0_0:3:0_14/2 +AATAACTAATATAAGTTTTTGACTCCTACCACCATCCTTTCTCCTTCTCCTAGCATCATCAATAGTAGAG +>chrM_5645_6067_1:2:0_1:3:0_1c/1 +ACCATCATTTCTCCTTCTCCTAGCATCATCAATAGTAGAGGCAGGAGTAGGAACATGATGAACAGTCTAC +>chrM_5645_6067_1:2:0_1:3:0_1c/2 +ATAAGAAAAAAAACTTCTGGGTGCCCCAAGAATCAGAACAGATGCAGGTAGAGAATTGGGTCCCCTCCTC +>chrM_5770_6257_3:0:0_1:2:0_46/1 +TCTCCCTTCATTTAGCAGGAGTGTCATCTATTTTAGGTGCAATTACTTTTATTACCACTATTCTCAACAT +>chrM_5770_6257_3:0:0_1:2:0_46/2 +TATAGTGGCTGATGTAAAGTAAGCTCGTGTGTCTACATATAATCCTCCTGTGAATAAGTGGTGGGCTCAT +>chrM_5831_6292_0:0:0_1:0:0_15/1 +CTAAATACTTTGACACCGGTAGGACTTGCGATAATTATAGTGGCTGATGTAAAGTAAGCTCGTGTGTCTA +>chrM_5831_6292_0:0:0_1:0:0_15/2 +TATCAACATGAAACCCCCAGCCATAACACAGTATCAAACTCCACTATTTGTCTGATCCGTACTTATTACA +>chrM_5910_6386_0:2:0_1:1:0_1e/1 +TAGACCACCAACTGTAAATAAGAAAATAAAGCCTAAGGCTCATAGTATAGCTGGAGATCAGTTAAAATTA +>chrM_5910_6386_0:2:0_1:1:0_1e/2 +CTCCTATTATCACTACCAGTGTTAGCCGCAGGCATTACTATACTACTAACACACCGCAACCTAAACACAA +>chrM_5930_6421_2:3:0_1:1:0_2e/1 +GTTAGCCGCAGGCATTACTATACTACTACCAGACCGCAACCTAAACACAACTTTCTTTGATCCCGCGGGA +>chrM_5930_6421_2:3:0_1:1:0_2e/2 +ATGTCAAGGGATGAGTTGGATAAAGCAATTCCGGTTAGACCACCAACTGTAAATAAGAAACTAAAGCCTA +>chrM_5959_6526_0:2:0_1:2:0_c5/1 +AATAATGTGAATCAGTGAACAAATCCTGCTATGATAGCAAACACTCCTCCCATTGATGGAACATAGTGGA +>chrM_5959_6526_0:2:0_1:2:0_c5/2 +CACACCGCAACCTAAACACAACTTTCTTTGATCCCGCGGGAGGAGGGGACCCAATTCTCTACCAGCATCT +>chrM_6074_6685_2:0:0_0:2:0_a3/1 +AGGATTTGGAATTATTTCACATGTAGTTACTTACTACTCCGGCAACAAAGAACCTTTCGGCTATATAGGA +>chrM_6074_6685_2:0:0_0:2:0_a3/2 +ACAGTGTTTCATGTGGTGTAAGCATCTGGGTAGTCTGAGTAGCGTCGTGGTATTCCTGAAAGGCCCAGTC +>chrM_6138_6598_0:0:0_1:2:0_6e/1 +GTTATGTTCACTCCTACGAATATGAAGTCGAAGTGGGCTTTTGCTCATGTGTCATCTAGGGTGAAGCCTG +>chrM_6138_6598_0:0:0_1:2:0_6e/2 +ATAGGAATAGTATGAGCAATAATGTCTATTGGCTTTCTAGGCTTTATTGTATGAGCCCACCACATATTCA +>chrM_6228_6791_1:0:0_0:0:0_ae/1 +ACACGAGCTTACTTTACATCAGCCACTATAATTATCGCAATTCCTACCGGTGTCAAAGTATTAAGCTGAC +>chrM_6228_6791_1:0:0_0:0:0_ae/2 +AGCATACGATACTGATATTACTTCTCGTTTTGAAGCAAAGGCCTCTCAAATTATAAAGATCATGATGAGA +>chrM_6246_6734_0:0:0_1:0:0_69/1 +TCAGCCACTATAATTATCGCAATTCCTACCGGTGTCAAAGTATTTAGCTGACTTGCAACCCTACACGGAG +>chrM_6246_6734_0:0:0_1:0:0_69/2 +GATCATGATGAGAACAGCTGTTAGTGAAATAAATGATCGTATAGAAGAGACAGTGTTTCATGTGGTGTAA +>chrM_6261_6802_2:0:0_2:0:0_87/1 +ATGGCAATTCCTACCGGAGTCAAAGTATTTAGCTGACTTGCAACCCTACACGGAGGTAATATTAAATGAT +>chrM_6261_6802_2:0:0_2:0:0_87/2 +AAATTTGTTGAAGCATACGATACTGATCTTACTTCTCGTTTTGAAGCAAAGGCGTCTCAAATTATAAAGA +>chrM_6356_6909_2:1:0_4:0:0_72/1 +CTTTATTTTCTTATTTACCGTTGGTGGTCTAACCGTAATTGCTTTATCCAACTCATCCCTTGACATCGTG +>chrM_6356_6909_2:1:0_4:0:0_72/2 +ATGAAAGCAATTTTAGGTGGTTCGATTGCTTCCTTTCTTATTTTACTTTTACATAGGTTGGTTCCTCGAA +>chrM_6366_6887_1:1:0_3:0:0_85/1 +TTATTTACAGTTGGTGGTCTAACCGTAATTGCTTTATCCAACTCATCCCTTGACATCGTGCTTCACGATA +>chrM_6366_6887_1:1:0_3:0:0_85/2 +CGATTCCTTCCTTTCTTAATTTACTATTACATAGGTTGGTTCCTCGAATGTGTGATATTGTGGAGGGCAG +>chrM_6367_6804_0:1:0_1:1:0_5d/1 +CTAAATTTGTTGAATCATACGATACTGATATTACTTATCGTTTTGAAGCAAAGGCCTCTCAAATTATAAA +>chrM_6367_6804_0:1:0_1:1:0_5d/2 +TATTTACAGTTGGTGGTCTAACCGGAATTGCTTTATCCAACTCATCCCTTGACATCGTGCTTCACGATAC +>chrM_6458_6985_2:2:0_1:0:0_b5/1 +CCACTATGTTCCATCAATGGGAGGAGTGTTTGCAATCATAGCAGGATTTGTTCACAGATTCCCATTATTT +>chrM_6458_6985_2:2:0_1:0:0_b5/2 +ATTTAACTTTGACAAAGTTATGTAATTGATTTTACTAATATCTTATTGAGAAAGACATATATGATATGAG +>chrM_6510_7029_2:1:0_1:0:0_16/1 +CACTGATTCCCATTATTTTCCGGGTTCACCCTAGATGACACATGAGCAAAAGCCCACTTCGCCTTCATAT +>chrM_6510_7029_2:1:0_1:0:0_16/2 +TGGCATGGGTAGGCCATATAAGATATATAGATTATTGATCTATAATTTAACTTTGACAAAGTTATGTAAT +>chrM_6514_6987_2:1:0_1:0:0_8/1 +TAATTTAACTTTGACAAAGTTATGTAATTGATTTTACTAATATCTTATTGAGAAAGACATATCGGATATG +>chrM_6514_6987_2:1:0_1:0:0_8/2 +GATACCCATTATTTTCAGGCTTCACCCTAGATGACACAAGAGCAAAAGCCCACTTCGCCTTCATATTCGT +>chrM_6719_7233_1:0:0_4:1:0_b0/1 +TGTTCTCATCATGATCTTTATAATTTGAGAGGCCTTTGCTTCAAAACGATAAGTAATATCAGTATCGTAT +>chrM_6719_7233_1:0:0_4:1:0_b0/2 +ATAAGGATTACAGCTGGTAGCCTAGTTCAAATGGTTACAACTACTAGTGCATCTATTGTGCTTGTATGTG +>chrM_6720_7201_2:1:0_1:0:0_b8/1 +TTTCTCATCATGATCTTTATAATTAGAGAGGCCTTTGCTTCAAAACGATAAGTAATATCAGTATCGTATG +>chrM_6720_7201_2:1:0_1:0:0_b8/2 +GGTTTCAACTTCTTGTGCATCTATTGTGCTTGTATGTGTTAGTTTTGTTTTTAATATTAGCGAGATGATA +>chrM_6845_7289_0:0:0_4:0:0_5c/1 +GGAACCAACCTATGTAAAAGTAAAATAAGAAAGGAAGGAATCGAACCCCCTAAAATTGGTTTCAAGCCAA +>chrM_6845_7289_0:0:0_4:0:0_5c/2 +GGTTGTTGATTTCGTCTATTATATATAGAATGCGTAGATAGGTGAGAGCCATTATGATAAGGATTACATC +>chrM_6864_7309_1:0:0_0:0:0_a6/1 +GTAAAATAAGAAAGGAAGGAATCGAACCCCCTAAAATTGGTTTCAAGCCAATCTCATATCCTATCTGTCT +>chrM_6864_7309_1:0:0_0:0:0_a6/2 +GGTTTTAACGGTTAATACGGGGTTGTTGATTTCGTCTATTATATATAGAATGCGTAGAGAGGGGAGAGCA +>chrM_6938_7424_2:0:0_1:0:0_b4/1 +CTTCTAGCAGTCGTAGTTCACCAGGTTTTCGGTCGTTTGTTGGGATTATATATGAATCAAAGCATAGGTC +>chrM_6938_7424_2:0:0_1:0:0_b4/2 +CAATAAGATATTCGTAAAATCAATTACATAACTTTGTCAAAGTTAAATTATAGATCAATAATCTAAATAT +>chrM_7046_7557_1:0:0_2:2:1_c6/1 +GCCACATCCCCTATTATAGAAGAGCTAATAAATTTCCATGATCACACACTAATAATTGTATTCCTAATTA +>chrM_7046_7557_1:0:0_2:2:1_c6/2 +GCTTGATTTATTCGGCCTGGGTTGCATCAGTTTAAAGTCCTAGGGAGGGGACTGCTCGTGAGTGGAGGAC +>chrM_7156_7672_2:1:0_0:0:0_53/1 +AAACCTAACACATACAAGCACAATAGATGCACTAGAAGTTGAAACCATTTGAACTATTGTACCAGCTGTA +>chrM_7156_7672_2:1:0_0:0:0_53/2 +TTCGAAATATTTTAGTGGAACCATTTCTAGGACAATGGGCATAAAGCTATGGTTAGATCCACAAATTTCA +>chrM_7188_7644_1:1:0_2:1:0_a9/1 +AGGACAATGGGCATAAAGCTATGGTTCGATCCACAAATTTCAGAGCATTGGCCATAGAATAACCCTGGTC +>chrM_7188_7644_1:1:0_2:1:0_a9/2 +TAGAAGTTGAAACCATTTGAACTATTCTAGCAGCTGTAATCCTTATCATAATTGCTCTCCCCTCTCTACG +>chrM_7223_7762_2:1:0_1:1:0_a1/1 +ACAATGGAGATATTAAGGTCTCTAACTTTAACTTAAAAGGTTAACGCTCTTAGCTTCATAGTGAAATTAA +>chrM_7223_7762_2:1:0_1:1:0_a1/2 +GTAATCCTTCTCATAATTGCTCTCCCCTCTCAACGCATTCTATATATAATAGACGAAATCAACAACCCCT +>chrM_7258_7724_0:1:0_0:0:0_10/1 +CATTCTATATATAATAGACGAAATCAACAACCCCTTATTAACCGTTAAAACCATAGGGCACCAATGATAC +>chrM_7258_7724_0:1:0_0:0:0_10/2 +GGTTAACGCTCTTAGCTTCATAGTGAAATTAAATTATTGAAGCAGATCAGTTTTCGAAATATTTTAGTGG +>chrM_7339_7816_1:0:0_3:4:0_43/1 +AATTGATGAGATAATTGTGATAATTCATGTTGAAGTATCTAGTTGTGGGTTAGCACAATGGAGATTTTAA +>chrM_7339_7816_1:0:0_3:4:0_43/2 +ATATACTGACTATGAAGACCTATGCTTTGATTCATATATAATCCCAACCAACGACCTAAAACCTGGTGAA +>chrM_7358_7894_0:0:0_1:0:1_bc/1 +TTTTAGGATTTTGGTGAAGGTGCCAGTGGGAATGTTTGTGATGAGACTTTTAGTTGAAATAAGATAAATA +>chrM_7358_7894_0:0:0_1:0:1_bc/2 +CTATGCTTTGATTCATATATAATCCCAACAAACGACCTAAAACCTGGTGAACTACGACTGCTAGAAGTTG +>chrM_7550_8033_2:2:0_0:0:0_26/1 +AATCAAGCAACAGCAACATCCAACGGACCCGGGTTATTCTATGGCCAATGCTCTGAAATTTGTGGATCTA +>chrM_7550_8033_2:2:0_0:0:0_26/2 +CGTTTTGAGGATGGGAATAGGATTGAAGGAAATATAATGATGGCTACAACGATTGGGAATCCTATTATTG +>chrM_7668_8147_1:1:1_1:2:1_6b/1 +TCGAAAACTGATCTGCTTCAATCATTTAATTTCACTATGAAGCTAAGAAGCGTTAACCTTTTAAGTTAAA +>chrM_7668_8147_1:1:1_1:2:1_6b/2 +GACACAATTATTAGGGTTCATGTTCGCACTTTTGGTGGTGGATTAGCATTATTTGTTTGATAATAAGTTT +>chrM_7728_8283_1:4:0_2:0:0_1b/1 +GTGTCGGAAGCCTGTAATTACGGCTCCATCTCCTAGTGGAATGGCTATACTTAGATTTATGGATAGTTGG +>chrM_7728_8283_1:4:0_2:0:0_1b/2 +TAAGTTAAAGTTAGAGACCTAAAAATCTCCATTGTGCTAAGCCACAACTAGATACATCAACATGAATTAT +>chrM_7785_8278_5:1:0_2:0:0_99/1 +GGAAGCCTGTAATTACGGCTGCAGCTCATAGTGGAATGGCTATACTTAGATTTATGGATATTTGGGTAGT +>chrM_7785_8278_5:1:0_2:0:0_99/2 +CAACATGAATTATCCCAATTATCTCATGAATAAATACCCTATTTATCATATTTCAACTAAAAGTCACATC +>chrM_7788_8291_0:0:0_3:1:0_86/1 +TTAAGTTTGTGTCGGAAGCCTGTAATTAGGGCTCCAGCTCATAGGGGAATGTCTATACTTAGATTTATGG +>chrM_7788_8291_0:0:0_3:1:0_86/2 +CATGATTTATCACAATTATCTCATCAATAATTACCCTATTTATCTTATTTCAACTAAAAGTCTCATCACA +>chrM_7835_8385_1:0:1_2:0:0_c7/1 +TGGTAGAATAAATAGGCTAATTGTTTCAATAATAATAATTATTGGAATTAGTGAAATTGGAGTTCCTTGT +>chrM_7835_8385_1:0:1_2:0:0_c7/2 +TTTCAACTAAAAGTCTCATCACAAACATTCCCACTGGCCCCTTCACCAAAATCCTAACAACCATAAAAGT +>chrM_7872_8415_2:0:1_1:0:0_1a/1 +GTTAGCTGTAAGCCGGACTGCTAATGCCATTGGTTGAATAAATAGGCTAATTGTTTCAATCATAATAAGT +>chrM_7872_8415_2:0:1_1:0:0_1a/2 +CACCTTCACGAAAATCCTAACAACGATAAAAGTAAAAACCCCTTGAGAATTAAAATGAACGAAAATCTAT +>chrM_7939_8482_1:1:0_2:0:0_25/1 +GGCTAATATTTATTAATACTAGAGTAGCTCCTCCGATTATGTGTATTAATAAGTGTCCTGCAGAAATGTT +>chrM_7939_8482_1:1:0_2:0:0_25/2 +CTATTTACCTCATTCATTACCCCAACAATAATAGGAATCCCAATCGTTGTAGCCATCATTATATTTCCTT +>chrM_7964_8497_0:0:0_2:0:0_8c/1 +CAATAATAGGATTCCCAATCGTTGTAGCCATCATTATATTTCCTTCAATCCTATTCCCATCCTCAAAACG +>chrM_7964_8497_0:0:0_2:0:0_8c/2 +TGGTAGCTGTTGGTGGGCTAATATTTATTAATACTAGAGTCGCTCCTCCGATTAGGTTTATTAATAAGTG +>chrM_8325_8781_1:0:0_2:0:0_9d/1 +TCCAATTTCACTAATTCCAATACTTATTATAATTGAAACAATTAGCCTATTTATTCAACCAATGGCATTA +>chrM_8325_8781_1:0:0_2:0:0_9d/2 +GTCATCATTGATATATTGTGATGATATTGGTGAGTAGGCCAAGGGTTAATAGTGTCATTGAATTATAGTG +>chrM_8419_8906_1:0:0_3:0:0_9f/1 +CGGTGAGAAGAATGCTGCAAAGAAAAATACTTCCGAGACGATGAATAGAATTATACCATATCGTAGTCCT +>chrM_8419_8906_1:0:0_3:0:0_9f/2 +ACTGCAGGACACTTATTAATACACCTAATCGGAGGCGCTACTCTAGTATTAATAAATATTAGCCCACCAA +>chrM_8733_9211_0:0:0_0:0:0_47/1 +TTAACCCTTGGCCTACTCACCAATATCCTCACAATATATCAATGATGACGAGACGTAATTCGTGAAGGAA +>chrM_8733_9211_0:0:0_0:0:0_47/2 +CCAGTAGCCATGAAGAATGTAGAACCATAGATACCATCTGAAATGGAGAATGATGTTTCAAAGTATTCTG +>chrM_8761_9187_1:1:0_0:0:0_ba/1 +CCATAGATACCATCTGAAATGGAGAATGATGTTTCAAAGTATTCTGAAGCTTGGAGGATGGTGAAGTAAA +>chrM_8761_9187_1:1:0_0:0:0_ba/2 +TCACAATATATCAATGATGACGAGACGTAATTCGTGAAGGAACCTAACAAGGCCACCACACTCCTATAGT +>chrM_8781_9305_4:1:0_3:0:1_3e/1 +TAAGTGATGTTTTGATGTGCAGTGAAATTTTAGTTTTCTAGTAGGCAAACAATAAGGAATGTTGATCCAA +>chrM_8781_9305_4:1:0_3:0:1_3e/2 +CGATACGTAATTCGTGAAGTAACCTAACAATGCCACCACACTCCTATAGTACAAAAAGGACTACGATATG +>chrM_8794_9257_1:1:0_1:0:0_79/1 +AAGAATAAGGAATGTTGATCCAATAATTACATGGAGTCCATGGAATCCAGTAGCCATGAAGAATGTAGAA +>chrM_8794_9257_1:1:0_1:0:0_79/2 +GTGAAGGAACCTAACAAGGCCACCACACTCCTCTTGTACAAAAAGGACTACGATATGGTATAATTCTATT +>chrM_8863_9244_0:0:0_1:0:0_92/1 +GTTGATCCAATAATTACATGGAGTCCATGGAATCCAGTAGCCATGAAGAATGTAGCACCATAGATACCAT +>chrM_8863_9244_0:0:0_1:0:0_92/2 +TCATCGTCTCGGAAGTATTTTTCTTTGCAGGATTCTTCTGAGCGTTCTATCATTCTAGCCTCGTACCAAC +>chrM_8886_9293_2:1:0_0:0:1_a2/1 +TTTGGAGGATTCTTCTGAGCGTACTATCATTATAGCCTCGTACCAACACATGATCTAGGAGGCTGCTGAC +>chrM_8886_9293_2:1:0_0:0:1_a2/2 +TGATGTGAAGTGAAATTTTAGTTGTCTAGTAGGCAAACAATAAGGAATGTTGATCCAATAATTACATGGA +>chrM_9031_9522_3:3:0_2:0:0_84/1 +ATGGAACTAGAATTAGCGTTAGGGATAATAAAATATTAATGAAGATAACAGTGTACATGTTAATTACTCT +>chrM_9031_9522_3:3:0_2:0:0_84/2 +TTTCAATTACATGCCCTCATCATAGCAATATAGAAGGTAAACGAAACCACATAAATCAAGCCCTCCTCAT +>chrM_9032_9593_1:2:1_1:0:0_b2/1 +TTCATTACATGACCTCATTATAGCCTTATAGAAGGTAAACGAAACCACATAAAACAAGCCCTACTAATTA +>chrM_9032_9593_1:2:1_1:0:0_b2/2 +GCTTGTAGGGTCGAATCCGCATTCATATGGATTTGCTTTTTCAGAGTACAGATTTATTTGGGGGAGTCAG +>chrM_9038_9471_1:3:0_1:1:0_8a/1 +TGTACAGGTTAATTACTCTGTTCTGGGTTTATTCAGAATCTACTAATTGGAAGTCAGTTCTATTAATTAT +>chrM_9038_9471_1:3:0_1:1:0_8a/2 +TACATGACGTCATCATAGCAATATAGAAGGTAAACGAAACCACATAAATCAAGCCCTACTAATTACCATT +>chrM_9120_9714_1:1:0_0:1:0_88/1 +TACTTCACCATCCTCCAAGCTTCAGAATACATTGAAACACCATTCTCCATTTCAGATGGTATCTATGGTT +>chrM_9120_9714_1:1:0_0:1:0_88/2 +TAGAGGTTTTAATTGTTTGAATTGCTCATGGTAGTGGAAGTAGAAGAGCAATTTTTAGGTCAAATAATAG +>chrM_9142_9548_1:1:0_1:2:0_77/1 +CAGAATACTTTGAAACACCATTCTCGATTTCAGATGGTATCTATGGTTCTACATTCTTCATGGCTACTGG +>chrM_9142_9548_1:1:0_1:2:0_77/2 +GTACAGATTTATTTGGGGGAGTCAGAAAGCAACTAGAATTAGCGTTAGGGATAAAGAAATATTAATGAAG +>chrM_9150_9818_1:1:0_1:1:0_bf/1 +TTTGAAACACCATTCTCCATTTCAGATGGTATCTAAGGTTCTACATTCTTCATGGCTACTGGATTCCATG +>chrM_9150_9818_1:1:0_1:1:0_bf/2 +ACTAATTACGATTCACTCTGTTCATTCTAATCCTTTTTGTGTTCATTCATATGCTAGGCCTAGAGATAGA +>chrM_9222_9781_2:0:1_1:0:0_23/1 +CTCCATGTAATTATTGGATCAACATTCCTTCTAGTTTGCCTACTAGACAACTAAAATTTCACTTCACATC +>chrM_9222_9781_2:0:1_1:0:0_23/2 +TGTGTTCATTCATATGCTAGGCCTAGAGATAGAATTGTGACTAGACTAAAGGCTATAATTATTATAGTAG +>chrM_9409_9920_3:1:0_1:0:0_d/1 +GATAGAGAGAAGGCTATGGTGAGGTTGAAGAAGGTAGATGGCATATTGGTAATTATGAACATCATCATAA +>chrM_9409_9920_3:1:0_1:0:0_d/2 +ATATCACTGACTTCCAATTAGTAGATTCTGAATAAACCCAGCACAGAGTAATTAACCTGTAGACTGTTAT +>chrM_9496_9991_0:0:0_3:1:0_80/1 +CTAATACTATGCCTTCCAGGCATAGTAAAGTGGATATTAGGTGAGAGCGAAATCTAAGTGTTCCTAGAAG +>chrM_9496_9991_0:0:0_3:1:0_80/2 +TATCCCTAACGCTAATTCTAGTTGCATTCTGACTCCCCCAAATAAATCTGTACTCAGAAAAAGCAAATCC +>chrM_9505_10155_3:0:0_1:0:0_9a/1 +CGCTACTTCTAGTTGCATTCTGACTCCCCCAAATACATCTGTCCTCAGAAAAAGCAAATCCATATGAATG +>chrM_9505_10155_3:0:0_1:0:0_9a/2 +GAGATTTTGGACGTAATCTGTTCCGAACGTGTTTGAAACTTTTACTAGTAGGGCTAGTCCTACAGCTGCT +>chrM_9647_10116_2:0:0_1:2:0_2a/1 +ATTATTTGACCTAGCAATTGCTCTTCTACTTCCACTACCATGAGCAATTCAAACAATTAAAACCTGTACT +>chrM_9647_10116_2:0:0_1:2:0_2a/2 +TTTTACTAGTAGGGCTAGTCCTACAGCTGCTTCTCAGGCTGCGAAAACTACGATGGTGATGGGGAATGGT +>chrM_9735_10262_1:0:0_1:2:0_40/1 +AAAACTATATGAGGTTACGTTTGTGCAGGTATTTTTAGGGCTTGATAGTCAGGTTAGTGGGAGTAGCATT +>chrM_9735_10262_1:0:0_1:2:0_40/2 +ATTCTAGTCACAATTCTATCTCTAGGCCTAGCATATGAATGAACACAAAAAGGATTAGAATGAACAGATT +>chrM_9897_10466_3:1:0_1:0:2_1/1 +CCTCACCATAGCCTTCTCACTATCACTACTAGGAACACTTATATTTCGCTCACACCTCATATCCACATTA +>chrM_9897_10466_3:1:0_1:0:2_1/2 +GATTAGTCTTGAGATGTAGAGTTTTTGTAGTACGTTATTATCTTTTTTTAGGTGGTTGGCTAGCTATTAA +>chrM_9907_10368_2:0:0_1:0:0_c2/1 +GCCTTCTCACTATCCCTTCTAGGGACACTTATATTTCGCTCTCACCTAATATCCAGATTACTATGCCTGG +>chrM_9907_10368_2:0:0_1:0:0_c2/2 +AAATCATTAATGGTGTGGATAGGGGGTCTGAGGAGAATATATTTGAAAAGTTTTTATAATTTTCGTCGGT +>chrM_9910_10411_1:1:0_0:1:2_bb/1 +TTCTCACTATCACTTCTAGGAACACTTATATTTCGCTCTCACCTAATATCCACATTACTATGCCAGGAAG +>chrM_9910_10411_1:1:0_0:1:2_bb/2 +TTGGCTAGCTATTAATATTAGTGGCAGTAATCAGGTTGTTAAAATAATTAATGGTGTGGATAGGGGGTCT +>chrM_10023_10620_2:2:0_3:0:0_4/1 +AAACTCCAACTCCATAAGCTCCATACCATTCCCCATCACGATCGTAGTTATCGCAGCCTGCGAAGCAGCT +>chrM_10023_10620_2:2:0_3:0:0_4/2 +AAAATAGGAAATAAATCCCTGCGTTAAGGCGTTCAGTATGGTTCCCTCATCGGGTAATAATAATAAGTGA +>chrM_10106_10577_3:1:0_2:0:0_5b/1 +AACTAGTAAAAGTTTCAAACACGAACGGAACAGATTACGTCCAAAATCTCAACCTGCTACAATGGTAAAA +>chrM_10106_10577_3:1:0_2:0:0_5b/2 +CCCTCATCGGGTAATAATAATAAGAGTTGGGATTACGGTTGCTTCAAATAAAATATAAAATATAATTAGT +>chrM_10193_10658_0:2:0_1:0:0_b6/1 +AATGCTACTCCCACTAACCTGACTATCAAGCCCTAAAAAAACCTGCACAAACGTAACCTCATATAGTTTT +>chrM_10193_10658_0:2:0_1:0:0_b6/2 +GAGGGCAATTAGCAGTGGAATAGAACCGATTAGGGTATAAAATAGGAAATAAATCCCTGCGTTTAGGCGA +>chrM_10203_10663_1:0:0_1:0:0_42/1 +AAGATGAGGGCAATTAGCAGTGGAATAGAACCGATTCGGGTATAAAATAGGAAATAAATCCCTGCGTTTA +>chrM_10203_10663_1:0:0_1:0:0_42/2 +CCACTAACCTGACTAACAAGCCCTAAAAAAACCTGAACAAACGTAACCTCATATAGTTTTCTAATTAGTT +>chrM_10206_10702_1:0:0_3:1:0_9e/1 +CTAACCTTACTATCAAGCCCTAAAAAAACCTGAACAAACGTAACCTCATATAGTTTTCTAATTAGTTTAA +>chrM_10206_10702_1:0:0_3:1:0_9e/2 +AAAATACTGAGTTTTAGGGTTCCTACATGGTTTTGGATTAAGATGAGGGCAATTAGCCGTGGAATAGAAC +>chrM_10254_10719_0:0:0_1:1:0_8e/1 +TATAGTTTTCTAATTAGTTTAACCAGCCTAACACTTCTATGACAAACCGACGAAAATTATAAAAACTTTT +>chrM_10254_10719_0:0:0_1:1:0_8e/2 +TTTGTGTTGTGAATGATAAAATTATGAGGTTTAGGGTTCCTACATGGTTTTGGATTAAGTTGAGGGCAAT +>chrM_10362_10821_2:1:2_0:0:0_c/1 +CTTTTGGTAGTCATAGGTGAACTCCATATAATGGTATTTTAATAAGAAATGCTATTATGCATGCCAACCA +>chrM_10362_10821_2:1:2_0:0:0_c/2 +ATTATTTTAACAACCTGATTACTGCCACTAATATTAATATCTAGCCAACCACCTAAAAAAAGCTAATAAC +>chrM_10389_10966_1:0:0_1:0:0_61/1 +CATAGGGAGAGAAGGAAGAAGGGGTATGCTATATATTTTGTTAGTGGGTCTAGAATAATGGAGATGCGAA +>chrM_10389_10966_1:0:0_1:0:0_61/2 +CTAATATTAATAGCTAGCCAAAACCACCTAAAAAAAGATAATAACGTACTACAAAAAGTCTACATCTCAA +>chrM_10461_11010_1:1:0_0:0:0_21/1 +AATCTGTTTGGCGTAAGCAGATTGAGCTAGTTATAATTATTCCTCATAGGGAGAGAAGGATGAAGGGGTA +>chrM_10461_11010_1:1:0_0:0:0_21/2 +CTAATCTGCTTACAAATTCTCCTAATCATAACCTTTTCAGCAAGTGAACTAATTATATTTTATATTTTAT +>chrM_10767_11161_1:0:0_2:0:1_39/1 +GAGTTTGCTAGGCAGAATAGGAGTGATGATGTGAGGCCATTTTCGATTATTAGTATTTTGCTCCTATGAA +>chrM_10767_11161_1:0:0_2:0:1_39/2 +ATAGCATTTCTTATTAAAATACCATTATATGGAGTTCACCTATGACTACCAAACGCCCATGTTGAAGCTC +>chrM_11041_11475_1:0:0_1:1:0_7b/1 +GCCACATAGCACTTGTTCTTGCATCAATCATAATCCAAACTCCATGAAGCTTCATAGGAGCAACAATACT +>chrM_11041_11475_1:0:0_1:1:0_7b/2 +TTAGTGTTAGTACTCGTGTGTGTGAGGGTTGGAGGTTAATTATATGGTTGCTTAGTTTGCCGCGTTGGGT +>chrM_11195_11669_2:0:0_1:0:0_49/1 +AGCAAGCCATGTTTTTAAACATGGAAGCATGAATTAGCAGTTCTTGCAATCTTTCTTGGTGAATAAGGAG +>chrM_11195_11669_2:0:0_1:0:0_49/2 +CATGGCCCGAGGACTTCAAATGGTCATCCCACTTATAGCCACATGATGACTGATAGCAATTCTAGCTAAT +>chrM_11211_11625_0:1:0_2:0:0_37/1 +CAAATGGTCTTACCACTTATAGCCACATGATGACTGATAGCAAGTCTAGCTAATCTAGCTCTACCCCCTT +>chrM_11211_11625_0:1:0_2:0:0_37/2 +TGCAATCTTTCTTGGTGAATAAGGAGGTTTATTTCCTGTTGTCAGATTGACAGTCTAATGATTTTTGTAA +>chrM_11464_11999_0:1:0_3:1:0_3a/1 +AGAGAAAAAGTTCGTTTTTAAGCATATTTTAAGTTCTATTGAATTTATGGTGACTCAGTGCCAGGTTGTA +>chrM_11464_11999_0:1:0_3:1:0_3a/2 +AACTAACACTAATAGCCCTTCACATAATTCCACTTATTATTCTAACTACCAGTCCAAAACTAATTACAGG +>chrM_11475_12014_1:1:0_2:1:0_56/1 +ATAGCCCTTCACATAATTCCACTTATTATTCTAACTACCAGTCCAAAACTAATTACAGGCCTGAGAATAT +>chrM_11475_12014_1:1:0_2:1:0_56/2 +AGATGTCAACAGGATAGAGAAAAAGATAGTTTTGAAGCTTATTTTAAGTTCTATTGAATTTATGGTGACT +>chrM_11715_12248_2:1:0_1:1:1_a0/1 +TAGGGCTGCAGTATATGCGACTGTTCTCCGTACCATCATCCAATTAGTAGGAAAGATATAATTCCCACCC +>chrM_11715_12248_2:1:0_1:1:1_a0/2 +ACCTTGGTGCAAATCCAAATCAAAGTAATCAATATTTTCACAACCTTAATCTTATTAATCTTCATTCTTC +>chrM_12064_12604_0:1:0_1:0:1_aa/1 +GTAAATAATGTGGTTAGGGCTCCGAGGCAAAGTATAGTTGTTAAAATAAAGTTAATATTAGCGTGAGGGG +>chrM_12064_12604_0:1:0_1:0:1_aa/2 +TACACTCAGACCCAAACATCAATCGATTCATTAAATATCTTACACTATTCCTGTTTACCATGCTTATCCT +>chrM_12113_12598_3:3:0_2:0:1_70/1 +CCTGTTTACCATGCTTATCCTCACCTCAGCCAACCACATATTTCAACCTTTCATTGGCTGAGCAGGGTTT +>chrM_12113_12598_3:3:0_2:0:1_70/2 +AAAGTGGTTAGGGGTCCGAGGCAAAGTATAGTTGTTAAAATAAAGTTATTATTAGCGTGAGGGGGTGGAA +>chrM_12174_12610_1:1:0_0:0:1_93/1 +GAAGGTGTGGGAATTATATCTTTCCTACTAATTGGATGATGGTACGGACGAACAGTCGCAAATACTGCAG +>chrM_12174_12610_1:1:0_0:0:1_93/2 +ATAGCTGTAAATAATGTGGTTAGGGCTCCGAGGCAAAGTATAGTTGTTAAAATAAAGTTATTATTAGCGT +>chrM_12218_12618_2:1:1_1:1:0_32/1 +CGGAGAACCGTCGCAAATACTGCAGCCCTACAAGCAATCCTCTATAACCGCATCTGAGACATCGGATTCA +>chrM_12218_12618_2:1:1_1:1:0_32/2 +GAGCACAAATAGCTGTAAATAATGTGGTTAGGGCTCCGAGGCAAAGTATAGTTGTTAAAAAAAAGCTATT +>chrM_12243_12713_2:0:0_1:0:0_bd/1 +GCCCTCCAAGCAATCCTCTATACCCGCATCGGAGACATCGGATTCATTTTAGCTATAGTTTGATTTTCCC +>chrM_12243_12713_2:0:0_1:0:0_bd/2 +TAGGTGTGGTTGGTTTATTCCTAGCGTCACTATTATCAGGCCTAGTTGGCTTGAAGTAGAGAAGGCAATG +>chrM_12275_12781_1:0:0_1:0:1_6/1 +ATGATTGAGCGAGAGCATATAGAAGAGTATAGCTTTGAAGAATGCGTGGGTACAGATGTGTAGGAATGCT +>chrM_12275_12781_1:0:0_1:0:1_6/2 +AGACATCGGATTCCTTTTAGCTATAGTTTGATTTTCCCTAAACATAAACTCATGAGAACTTCAACAGATT +>chrM_12355_12806_0:1:0_1:0:0_6a/1 +GTCTTGTTCGTCTGCCAGGCTATGAATTATTGAGCCAGAGCATATAAAGAGTATAGCTTTGAAGAATGCG +>chrM_12355_12806_0:1:0_1:0:0_6a/2 +ACAACAACGACAATCTAATTCCACTTAGAGGCCTATTAATCGCAGCTACAGGAAAATCAGCACAATTTGG +>chrM_12440_12937_5:0:0_1:0:0_8b/1 +ATTGCTTCAATAATTAGGTCTTTTGAGTAGAACCCTGTTAGGAATGGTATTCGTGTGAGGGCGAGGCTTC +>chrM_12440_12937_5:0:0_1:0:0_8b/2 +AGCATCAGCAATAGACGGCCCTACACCAGTTTCATCACTACTACACTCAAGTACAATAGTATATGCAGGA +>chrM_12577_13079_0:0:0_1:1:1_11/1 +ATTTTGGTTAATGGAGATGTAGGGGGGGAAAAGGCGGTTTTGTTATTGTTACGAAGTAAATGATTCGTAT +>chrM_12577_13079_0:0:0_1:1:1_11/2 +GCCTCGGAGCCCTAACCACATTATTTACAGCTATTTGTGCTCTCACCCAAAACGACATCAAAAAAATCAT +>chrM_12622_13091_0:0:0_3:0:1_78/1 +CCCAAAACGACATCAAAAAAATCATTGCCTTCTCTACATCAAGCCAACTAGGCCTGATAATAGTGACGCT +>chrM_12622_13091_0:0:0_3:0:1_78/2 +GAGGTCTGGGTCATTTTCGTAAATGGAGATGTAGGTGGGGAAAACGCGGTTTTGATATTGTTACGAAGTA +>chrM_12640_13011_2:0:0_2:1:0_62/1 +TGCTGTACATAGCTGTCATCGAAGTGGGGATTAGTGTAATTAGTAGGGCTCAGGCGTTGGTGTTGCAGGT +>chrM_12640_13011_2:0:0_2:1:0_62/2 +AAATCATTGCCTTCTCTACATCAAGCCAACTATGCCTGATAATAGTGACGCTAGGAATAAACCACCCACA +>chrM_12705_13147_4:0:0_2:0:0_94/1 +CGACACCTAGCATTCCTACACATCTGTACCCACGCAATGTTCAAAGCTATACTCTTTCTATGCTCTGGCT +>chrM_12705_13147_4:0:0_2:0:0_94/2 +GAGATGACAAATCCTGCAAAGATGCTTCCGCATGCTAGGCGTTTGATTGGGTTTATGAGGTCTGGGACAT +>chrM_12720_13279_1:0:1_2:0:0_2/1 +ATTGCTAGTTTTATGGTTAGGTTGTTTAGTTCTAGTGCGATTAGTAATCCTAATACTGAAATAATTAGGG +>chrM_12720_13279_1:0:1_2:0:0_2/2 +CTACACATCTTTACCCACGCATTCTTCAAAGCTATACTCTTCTATATGCTCTGGCTCAATCATTCATAGC +>chrM_12881_13337_0:0:0_1:1:0_89/1 +AATAGATGGTAAAAACCCCAGTAAACTTGAGAAGGATGAATATGGATTTGCTTTATTTATTGATAGTTTT +>chrM_12881_13337_0:0:0_1:1:0_89/2 +CACAGGAATACCATTCCTAACAGGGTTCTACTCAAAAGACCTAATTATTGAAGCAATTAATACCTGCAAC +>chrM_12982_13475_3:1:0_2:0:1_75/1 +TCGCCACTTCTATGACAGCTATGAACAGCATACGACTCATTTACTTCGTAACAATCACAAAACCGCGTTT +>chrM_12982_13475_3:1:0_2:0:1_75/2 +GGTTGTTAAAGTGGTTATGTTTGTGTGCAAGAGTTGCGGTGGATTTTGGGATGGTTTTTTGTAACCAGAT +>chrM_13142_13600_1:0:0_1:2:0_34/1 +ATCTTTGTTTGCGGGTATTTTTGTTATTATAGAGATTACTCGAGATTAATTGAGTATAAGAAAATAATTA +>chrM_13142_13600_1:0:0_1:2:0_34/2 +CATCTCATATAAAATTCCACCAACCAGCATTCCAGTCCTCACAATACCATGATTTTTAAAAACCACAGCC +>chrM_13198_13763_2:0:0_0:1:0_7c/1 +TTTGTGTGCTTAATTATTATGATGAAGTTGGAGTAATTAATCTTGATGGTATGGGAGATTGGTTGATGTA +>chrM_13198_13763_2:0:0_0:1:0_7c/2 +TAAAAACCACAGCCCTAATAATTTCAGTATTAGGCTTCCTAATCGCACTAGAACTAAACAACCTAACCAT +>chrM_13281_13783_1:1:0_1:0:0_67/1 +AATAAAGCAAATCCATATTCATCCTTCACAAGTTTACTGGGGTTTTTCCCATCTATTATTCACCGCATTA +>chrM_13281_13783_1:1:0_1:0:0_67/2 +GATTATAGAGGTTTTTTTAATTTGTGTGGTTAATTATTATGATGAAGTTGGAGTAATTAATCTTGATGGT +>chrM_13326_13750_2:0:1_2:1:0_82/1 +TTATTATGATGAAGTTGGAGTAATTACTCTTGATGGTATGGGAGATTGGTTGATGTATTAGGTTGATGAT +>chrM_13326_13750_2:0:1_2:1:0_82/2 +TACCCATCTCTTATTCACCGCATTACACCCATAAAATTCTCAACCTAAGCCTAAAAACATCCCTAACTCT +>chrM_13338_13860_2:1:1_2:0:1_4d/1 +ATTCACCGCATTACACCCATAAAATTCTGAACCTAAGCCTAAAAACATCCCTGACTCTCCTAGAGTTGAT +>chrM_13338_13860_2:1:1_2:0:1_4d/2 +ACTGCTATAGCTACTGAGGAATATCCAGAGACATGGGGATCTAACTGATTAATTTTGGGTATTTAGTATT +>chrM_13482_13976_0:0:0_1:2:0_c1/1 +TAATTGTTACTGGGTTTGTTGGTCGTTTAATGGTTTTAGGGTTTGGTTGATCGTTTTTAGGTTTAATAGT +>chrM_13482_13976_0:0:0_1:2:0_c1/2 +AAAGGCTTAATTAAATTGTACTTTATATCATTCCTAATTAACATCATCTTAATTATTATCTTATACTCAA +>chrM_13494_14044_3:1:0_1:1:0_7d/1 +AAATTGTACATTATATCATTCCTAATTAACATCATCTTAATTATTATCTTTTACTCCAATAATCTCGAGT +>chrM_13494_14044_3:1:0_1:1:0_7d/2 +TTCATTATTTTCGGTTGGTTGTCTTGGGTTCGCATTAAAGCCTTCACCTATTTATGGAGGTTTAGGTTTA +>chrM_13715_14154_1:0:0_1:1:0_96/1 +CCATCACGATTAATTACTCCAACTTCATCATAATAATTAAGCACACAAATTAAAAAAACCTCTATAATCA +>chrM_13715_14154_1:0:0_1:1:0_96/2 +TGTTTGTCATACGGTGTTTCTGTAGTTGAATTACAACGATGATTTTTCATGTCATTGGTCGCAGTTGAAT +>chrM_13791_14330_0:0:0_3:0:0_29/1 +GGCTGTTATTGTAACTGATGTGTAGTGAATGGCTAAGAAAAGACCTGTAATGATTTGGACTATAAGGCAG +>chrM_13791_14330_0:0:0_3:0:0_29/2 +ATACTAAAAAACCCAAAATTAATCAGTTAGATCCCCAAGTCTCTGGATATTCCTCAGTAGCTATAGCAGT +>chrM_13813_14351_0:1:0_0:1:0_1f/1 +TCAGTTAGATCCCCAAGTCTCTGGATATTCCTCAGTAGCTATAGCAGTTGTATATCCAAACACAACCAAC +>chrM_13813_14351_0:1:0_0:1:0_1f/2 +AATGTGTGTTACTGATGAAAAGGCTGCTATTGTATCTGATGTGTAGTGTATGGCTAAGAAAAGACCTGTA +>chrM_13910_14543_2:1:0_1:1:0_30/1 +ATTAAACCTAAAAACGATCCACCAAACCCTAAAACCATTAAACGAGCAACAAACCGACTAACAATTAAAC +>chrM_13910_14543_2:1:0_1:1:0_30/2 +AAGGAGGTAGCCTATAAATGCTGTGGCTATGACTGCGAACAGAAGAAGTACTCCAATGTTTCAGGTTTCT +>chrM_13936_14395_2:2:0_1:1:1_76/1 +CCCTAAAACCATTAAACGACCAACAAACCCAGTAACCATTAAACCTAAACCTCCATAAATAGGTGAATGC +>chrM_13936_14395_2:2:0_1:1:1_76/2 +GCGTGTATATATCGGATTAGTCACCCGTAAATTAACATCTCGACAAATGTGTGTTACTGATGAAAAGGCT +>chrM_13940_14475_1:1:0_3:2:0_27/1 +AAAACCATTAAACGACCAACAAACCCACTAACAATTAACCCTAAACCTCCATAAATAGGTGAAGGCTTTA +>chrM_13940_14475_1:1:0_3:2:0_27/2 +CTATAAATGTATCTGATCCATAATATAATCGTCGTCCGACAAGAAGGAACAAGCAAATAAAAAATATTGA +>chrM_13944_14351_1:1:0_0:0:0_44/1 +AATGTGTGTTACTGATGAAAAGGCTGTTATTGTATCTGATGTGTAGTGTATGGCTAAGAAAAGACCTGTA +>chrM_13944_14351_1:1:0_0:0:0_44/2 +CCATTAAACGACCAACAAACCCACTAACAATTAAACCTAAACGTCCATAAATAGGTGAAGGCTTTAATGC +>chrM_13991_14484_3:1:0_3:4:0_20/1 +TAAATAGGTGAAGGCTTTAATGCTAACCCCAGACAACCAACCCAAAATAATGATCTTAAAACCAAAATAT +>chrM_13991_14484_3:1:0_3:4:0_20/2 +AAGAGGTTTCTATAAATGTATCTGATCCATAATATAAGCCTCGTCGGACCTGAAGGAACAAGCAAATAAA +>chrM_13992_14451_1:1:0_1:3:0_52/1 +ATAAGCCTCGTCGGAGCTGAAGGAACAAGCAAATAAAAAATATTGAGGCTCCGTTTGCGTGTATATATCG +>chrM_13992_14451_1:1:0_1:3:0_52/2 +AAATAGGTGAAGGCTTTAATTCTAACCCAAGACAACCAACCAAAAATAATGATCTTAAAACAAAAATATA +>chrM_14052_14489_0:0:0_3:4:0_4c/1 +CAAAAATATAATTATTCATTATTTCTACACAGCATTCAACTGCGACCAATGACATGAAAAATCATCGTTG +>chrM_14052_14489_0:0:0_3:4:0_4c/2 +AATGTTTCAGGTAACTATAAATGTATCTGATCCATAATATAAGCCTCGTCGGACCTTAAGGAACAAGCAA +>chrM_14105_14613_0:0:0_2:0:0_48/1 +ATGAAAAATCATCGTTGTAATTCAACTACAGAAACACCTAATGACAAACATACGAAAAACACACCCATTA +>chrM_14105_14613_0:0:0_2:0:0_48/2 +CAATATATGGGATGGCAGATAGGAGGTTTGTAATAACTGTGGCACCTCAGAATGATATTTGTCCTCATTG +>chrM_14128_14614_0:1:0_1:1:0_97/1 +AACTACAGAAACACCGAATGACAAACATACGAAAAACACACCCATTATTTAAAATTATTAACCACTCATT +>chrM_14128_14614_0:1:0_1:1:0_97/2 +CCAATATCTTGGATGGCTGATAGGAGGTTTGTAATAACTGTGGCACCTCAGAATGATATTTGTCCTCATG +>chrM_14131_14628_2:1:0_2:1:0_36/1 +TACAGAAACACCGAATGACAAACATACGACAAACACACCCATTATTTAAAATTATAAACCACTCATTCAT +>chrM_14131_14628_2:1:0_2:1:0_36/2 +CGACTAGGGTTGTTCCAATATATTGGATGGCTGATAGGAGGATTGTAATAACTGTGTCACCTCAGAATGA +>chrM_14312_14826_2:1:1_4:1:0_a4/1 +CTTTGATTTTATAGTAGGGGTGAAATGGACATTTATCTGCATCTGAGAATAATCCTGTTGGGTTGTTTGA +>chrM_14312_14826_2:1:1_4:1:0_a4/2 +ATCAGATAGAATAACAGCCTTTTCATCAGTAACACACATTTGTCGATATGTAAATTTACGGGTGACTAAT +>chrM_14442_15026_1:2:0_3:0:0_60/1 +CGAGGCTTATATTATGGATCAGATACATTTATAGAAACCTGAAACATTGGAGTACTTCTTCAGTTCGCAG +>chrM_14442_15026_1:2:0_3:0:0_60/2 +TAAGGCTATGACACCTCCTAGTTTCTTGGGGATTGAGGGTAGAATGGCGTATGCAAATAGGAAATATCAT +>chrM_14576_14894_2:0:0_0:0:0_5f/1 +AGTTATTCCAAACCTCCTATGAGCCATCCCATATATTGGAACAACCCTAGTCGAATGAATTTGAGGGGGC +>chrM_14576_14894_2:0:0_0:0:0_5f/2 +TAGTATGTCTGGGAAAAATAATACTAGGGTTATGAGAATTAAGAATATGATTAGGATACCTAGGATATCT +>chrM_14707_15163_1:1:0_1:2:0_9/1 +TTATCGGGGCCCTAGCAATCGTTCACCTCATCTTCCTCCACGAAACAGGATCAAACAACCCAACAGGATT +>chrM_14707_15163_1:1:0_1:2:0_9/2 +CCCCCAATTCAGGTTACGATAAGTAGGTTGGCTACTAGGATTCAGTACAAAATTTTTCTGATTGGGCGGA +>chrM_14728_15189_1:2:0_2:0:0_7a/1 +TTCACCTCATCTTCCTCCACGAAACAGGATCAAACCACCCAACAGGATTATACTCAGATGCAGATAAAAT +>chrM_14728_15189_1:2:0_2:0:0_7a/2 +TAATAAATGGGTGTTCTCCTGGTTGGCCCCCAATTCAGGTTAAGATAAGTAGGTTGGCTACTAGGAATCA +>chrM_14768_15298_0:1:0_1:1:0_ac/1 +CTATCAAGACATGGATATAATTTTAGTATTTTGTCTTCGATAAGTCCTGAGCTTGGTATAAGAATTAAGA +>chrM_14768_15298_0:1:0_1:1:0_ac/2 +AACAGGATTATACTCAGATGCAGATAAAATTCCATTTCACCCCTACTATACAATCAAAGATATCCTAGGT +>chrM_14794_15314_1:0:0_1:0:0_c0/1 +AAATTCCATTTCACCCCTACTATACAATCAAAGATATCCTAGGTATCCTAATCATATTCTTAATTCTGAT +>chrM_14794_15314_1:0:0_1:0:0_c0/2 +CAGAGTAATGTTTATACTATCAAGACATGGATATAATTTTAGTATTTTGTCTTCGATACTTCCTGAGATT +>chrM_14820_15346_1:0:0_0:0:0_5a/1 +AAGAGAAGATCTTCATTTCAGGTTTACAAGACCAGAGTAATGTTTATACTATCAAGACATGGATATAATT +>chrM_14820_15346_1:0:0_0:0:0_5a/2 +ATCAAAGATATCCTAGGTATCCTAATCATATTCTTAATTCTCCTAACCCTAGTATTATTTTTCCCAGACA +>chrM_14858_15398_0:0:0_3:0:0_b3/1 +CAGCTTTGGGTGCTGGAGGTGGGTAGTAGCTCCTTCTTCTTGATGTCTTGAGAAGAGCAGATCTTCATTT +>chrM_14858_15398_0:0:0_3:0:0_b3/2 +TCTCATAACCCTAGTATTATTTTTCCCAGACATACTAGGAGACCCAGACAACTACATACCAGCTAATCCA +>chrM_14885_15311_3:1:0_1:0:0_3/1 +AGTAATGTTTATACTATCAAGACATGGATATAATTTTAGTATTTTGTCTTCGATAATTCCAGAGATTGGT +>chrM_14885_15311_3:1:0_1:0:0_3/2 +AGACATACTAGGAGAGGCCGACAACTACCTACCAGCTAATCCACTAAACACCCCACCCCATATTAAACCC +>chrM_14975_15480_1:0:1_0:1:0_4e/1 +ATACGCCATTCTACGCTCCACTCCCCAATAAACTAGGAGGTGTCCTAGCCTTAATCTTATCTATCCTAAT +>chrM_14975_15480_1:0:1_0:1:0_4e/2 +AATAGTTTAATGTACGATATACATGAATGTACTGTTGTACTATGTAAATTTATGTACTCAAGAAGTAGTT +>chrM_14988_15504_0:0:0_1:1:0_38/1 +GTATTAGCTTATATGCTTGGGGAAAATAGTTTAATGTACGATATACCTAAATGTACTGTTGTACTATGTA +>chrM_14988_15504_0:0:0_1:1:0_38/2 +CGCTCAATCCCCAATAAACTAGGAGGTGTCCTAGCCTTAATCTTATCTATCCTAATTTTAGCCCTAATAC +>chrM_15171_15615_1:0:0_0:1:0_c3/1 +TAACACAGATATGTCCTTATAACATTAGTTTAATGTGTTTAAGATAATATTCATGGTATATATATTGGTT +>chrM_15171_15615_1:0:0_0:1:0_c3/2 +GTAGAACACCCATTTATTATCATTGGCCAACTAGCCTCCATCACATACTTCTCAATCATCTTAATTCTTA +>chrM_15196_15749_1:1:1_2:1:0_c4/1 +GCTAACTAGCCCCATCTCATACTTCTCAATCATCTTAATTCTTATACCAATGTCAGGAATTATCGAAGAC +>chrM_15196_15749_1:1:1_2:1:0_c4/2 +TGGCCCGGAGCGAGAAGAGGGGCATTGGTGGGCGGGTTGTAGGTTTCACGGAGGATGGAAGATTAATAGA +>chrM_15361_15805_1:0:0_2:0:0_81/1 +TGAAGTAAGAACCAGATGTCTTATAAAGTTTCAGTTTAGCTACCCGCAAGTTTAATGGGCCCGGAGCGAG +>chrM_15361_15805_1:0:0_2:0:0_81/2 +AAGAAGGAGCTACTCCCCACCACCAGCACCCAAAGCTGGTATTCTAATTAAACTACTTCTTGAGAACATA +>chrM_15417_15889_0:0:0_2:0:0_50/1 +TTCTTGAGTACATAAATTTACATAGTACAACAGTACATTTATGTATATCGTACATTAAACTATTTTCCCC +>chrM_15417_15889_0:0:0_2:0:0_50/2 +GTTGGTCATGGGCTGATTAGACCCGAAACCATCGAGATGTCTTATTTAAGGGGCACGTATGGGCGATAAC +>chrM_15462_15945_2:1:0_0:0:0_0/1 +TATCGTACATTAAACAATTTTCCCCAAGCATATAAGGTAATACATTAAATCAATGGTTCAGGTCATAAAA +>chrM_15462_15945_2:1:0_0:0:0_0/2 +TGTTGATGAAAGTAGGCCAAAATAAAAAGATACCAAATGCATGACACCACAGTTATGTTGGTCATGGGCT +>chrM_15481_15968_1:2:0_2:0:0_6d/1 +GTCCTTACATGCCTTGACGGCTATGTTGATGAAAGTAGGCCAAAATAAAAAGATCCCAAATGCATGACAC +>chrM_15481_15968_1:2:0_2:0:0_6d/2 +TTCCCCAAGCATATAAGCTAATACATTAAATCCATGGTTCAGGTCATAAAATAATCATCAACATAAACCA +>chrM_15523_16020_2:1:0_1:1:0_31/1 +GGGTTTTGCGGACTAATGATTCTTCACCTAAGGTGCGTCTAGACTGTGTGCTGTCCTTTCATGCCTTGAC +>chrM_15523_16020_2:1:0_1:1:0_31/2 +GTCATAAAATACTCAACAACATAAACCAATATATATACCATGAATATTATCTTAAACACATTAAACTAAT +>chrM_15549_16044_0:1:0_1:1:0_59/1 +ATGAATAATTAGCCTTAGGTGATTGGGTTTTGCGGACTAATTATTCTTCACCGAAGGTGCGTCTAGACTG +>chrM_15549_16044_0:1:0_1:1:0_59/2 +CAATATATATACCATGAATATTATCTTAAACACATTAAACTAATGTTATAAGGACATATCTGTGTTATCC +>chrM_15642_16224_2:1:0_0:0:0_a5/1 +AGTACTAAAATATAAGTCATATTTTGGGAACTACTAGAATTGATCAGGACATAGGGTTTGATAGTTAATA +>chrM_15642_16224_2:1:0_0:0:0_a5/2 +CTCTTCTCTTCCATCTGACTATCCCCTTCCCCATTTTGTCTATTAATCTTCCATCCTCCGTGAAACCAAC +>chrM_15720_16131_0:1:0_2:1:0_58/1 +TGTTTATGGGGTTTGGCATTAAGAGGACGGGGTGGGGGGTTTTGAGAGTTAAAATTTGGTATTGAGTAGC +>chrM_15720_16131_0:1:0_2:1:0_58/2 +CACCAATGCCCCTCCTCTCGCTCCGGGCCCATTAAACTTGGGGGTAGCTAAACTGAAACTTTATCAGACA +>chrM_15820_16268_3:1:0_1:0:2_7f/1 +TTAGAGTTTTGGTTCACGGAACATGATTTTGTAAAATTTTTACAAGTACTAAAATAAGTCATATTTTGGG +>chrM_15820_16268_3:1:0_1:0:2_7f/2 +GTTATCGCCCATACGTTTCCCTTAACTCAGACATCTCGATGGTATCGGGTCTAATCAGCCCCTGACCAAC diff -r a0d039fa9771 -r a8d69aee190e test-data/samtools_fastx-out1.fasta.gz Binary file test-data/samtools_fastx-out1.fasta.gz has changed diff -r a0d039fa9771 -r a8d69aee190e test-data/samtools_fastx-out2-1.fastq.gz Binary file test-data/samtools_fastx-out2-1.fastq.gz has changed diff -r a0d039fa9771 -r a8d69aee190e test-data/samtools_fastx-out2-2.fastq --- a/test-data/samtools_fastx-out2-2.fastq Mon Mar 12 12:53:10 2018 -0400 +++ b/test-data/samtools_fastx-out2-2.fastq Fri Sep 28 04:39:19 2018 -0400 @@ -10,30 +10,14 @@ GTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAGCCCAAACTAATTATCTTCGGCGTAAAACG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_655_1179_0:1:0_1:2:0_60 -CACCATCTCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCAAAACCTAAAAAGGTATTAAAGTAAGC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_709_1253_2:0:0_2:1:0_23 -AGGTATTAAAGTCAGCAACAGAATCAAACATAAAAACGTTAGGTCAAGGTGTAGCCAATGAAATGGGAAG +@chrM_361_902_2:3:0_1:1:0_8e +GTGCGTACTTCATTGCTCAATTCACTTAAGATCTCTATTCTTAATTTACTACTAAATCCTCCTTAGTCCT + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_364_806_2:3:0_0:0:0_54 TTCTTTTATAAGAAAATGTAGCCCATTTCTTCCCATTTCATTGGCTACACCTTGACCTAACGTTTTTATG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_748_1226_0:0:0_3:2:0_a -TCTTTCCCTTGCGGTACTAGTTCTATATGACCTAGATGTACGAATTTCTCTCTCCAATACTTTTATTAGG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_820_1322_1:2:0_1:1:0_32 -TTAATGAAACTAAAGGACTAAGGAGGATTTAGTAGTAAATTAAGAATAGAGATCTTAATTGGATTGAGCA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_361_902_2:3:0_1:1:0_8e -GTGCGTACTTCATTGCTCAATTCACTTAAGATCTCTATTCTTAATTTACTACTAAATCCTCCTTAGTCCT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_406_958_3:0:0_1:1:0_c3 TCTAGAAATTAATTATGTTAAGTTTAATTTAATTTGAGGAGGGTGAGTGGCGGTGTGTGCGTACTTCATT + @@ -42,18 +26,30 @@ CATTGGTCATGAAATCTTCTGGGTGTAGGCCAGATGCTTTAATATTAAGCTACACTATGATTATTCCAAG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_1023_1543_3:0:0_1:0:0_30 -ATCATAGTGTAGGTTCCTATTAAAGCATCTGGCCTACACCCAGAAGATTTCATGACCAATGAACACTCTG +@chrM_655_1179_0:1:0_1:2:0_60 +CACCATCTCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCAAAACCTAAAAAGGTATTAAAGTAAGC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_709_1253_2:0:0_2:1:0_23 +AGGTATTAAAGTCAGCAACAGAATCAAACATAAAAACGTTAGGTCAAGGTGTAGCCAATGAAATGGGAAG + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_713_1102_2:0:0_0:0:1_50 AGGTGATTAGTTCAGAGTGTTCATTGGTCATGAAATCTTCTGGGTGTAGGCCAGATGCTTTAATATTAAG + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_748_1226_0:0:0_3:2:0_a +TCTTTCCCTTGCGGTACTAGTTCTATATGACCTAGATGTACGAATTTCTCTCTCCAATACTTTTATTAGG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_787_1256_2:0:0_1:1:0_5a TGCTTGTTCTTACTTTTAATTAGTCTTTCATGTTTCCCTTGCGGTACTAGTTCTATATCTCCTAGATGTA + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_820_1322_1:2:0_1:1:0_32 +TTAATGAAACTAAAGGACTAAGGAGGATTTAGTAGTAAATTAAGAATAGAGATCTTAATTGGATTGAGCA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_835_1289_4:2:0_0:1:0_44 GTTCATTATGCAAAAGGTACAAGGTTTAATCTATGCTTGTTCTTACTTTTAATTAGTCTTTCATCTTTCC + @@ -62,58 +58,50 @@ ATTTAGTAGTAAATTAAGACTAGAGATCTTACTTGAATTGAGCAATGAAGTACGCACACACCGCCAGACA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_1370_1912_0:0:0_1:1:1_79 -TCAACTCGTCTATGTGGCAAAATAGTGAGAAGATTTTTAGGTAGAGGTGAAAAGCCTAACGAGCTTGGTG +@chrM_961_1470_3:2:0_1:0:0_2c +ACTTAAATTCATTTTTTGGGTAACCAGCTATCACCCAGCTCGTTAGGCTTTTCACCTCTACCTAAAAATC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_961_1470_3:2:0_1:0:0_2c -ACTTAAATTCATTTTTTGGGTAACCAGCTATCACCCAGCTCGTTAGGCTTTTCACCTCTACCTAAAAATC +@chrM_1023_1543_3:0:0_1:0:0_30 +ATCATAGTGTAGGTTCCTATTAAAGCATCTGGCCTACACCCAGAAGATTTCATGACCAATGAACACTCTG + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_1053_1571_0:1:1_4:0:0_bb CTATAAAAGGTTTTTTCGGTTCCAGAAGAGCTGTCCCTCTTTTGGCTATACTCTAAACTTAGTTTTTGAT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_1550_2018_2:0:0_0:1:0_e -GAACGGAAAAAACCTTTAATATTGAATAATTAACAAAACAGCTTTTAACCATTGTAGGCCTAAAAGCCGC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_1762_2310_0:1:0_3:1:1_d -TGCCTTGTAAGTCTAGGTGTATAATCCTTCGGAGGATTTTTTATTCTCCGAGGCCACCCCAAGCGAAATT +@chrM_1370_1912_0:0:0_1:1:1_79 +TCAACTCGTCTATGTGGCAAAATAGTGAGAAGATTTTTAGGTAGAGGTGAAAAGCCTAACGAGCTTGGTG + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_1415_1865_4:0:0_1:2:0_5e GCGTTAACAGAGAAGTTAAAGGTGCATTATTTATAGTGTGATTATTGCCTATAGTCTGATTAACTAACAA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_1881_2335_1:1:1_1:1:2_34 -TCAATAAGATATGTTGATTTTACATTGACTTGTAAGTCTAGGTGTATAATCAAGTCGGAGGATTTTTTAT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_2036_2630_1:0:0_3:3:0_af -TAATCACTTGTTCCTTAATTAGGGACTAGCATGAACGGCTAAACGAGGGTCCAACTGTCACTTATCTTTA +@chrM_1550_2018_2:0:0_0:1:0_e +GAACGGAAAAAACCTTTAATATTGAATAATTAACAAAACAGCTTTTAACCATTGTAGGCCTAAAAGCCGC + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_1614_2107_1:1:0_2:0:0_2e ATTAAAGATAAGAGACAGTTGGACCCTCGTTTAGCGGTTCATGGTAGTCCCTAATTAAGGAACAAGTGAT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_2091_2559_1:1:0_3:0:0_6e -TGTCTCTTATCTTTAATCAGTGAAATTGACCTTTCAGTGAAGAGGCTGAAATATAATAATAAGACGAGAA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_1736_2168_2:2:0_0:1:0_a2 ATAGGGTCTTCTCTTCTTATTATTATATTTCAGCCTCTTCACTGAAAGGTCAATTTCACTGATTAAAGAT + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_1762_2310_0:1:0_3:1:1_d +TGCCTTGTAAGTCTAGGTGTATAATCCTTCGGAGGATTTTTTATTCTCCGAGGCCACCCCAAGCGAAATT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_1881_2335_1:1:1_1:1:2_34 +TCAATAAGATATGTTGATTTTACATTGACTTGTAAGTCTAGGTGTATAATCAAGTCGGAGGATTTTTTAT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_1883_2385_1:1:1_0:0:0_1e GCGCTGTTATCCCTAGGGTAACTTGGTCCGTTGATCAAAATATATCTGGGTCAATAAGATATGTTGATTT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_2319_2795_0:0:0_0:1:0_56 -TCAACATATCTTATTGACCCAGATATATTTTGATCAACGGACCAAGTTACCCTAGGGATAACAGCGCAAT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_1915_2407_1:0:0_2:0:0_c0 ATATGAACTCTTAAATAGGATTGCGCTGTTATCCCTAGGGTAACTTGGACCGTTTATCAAAATATATCTG + @@ -122,10 +110,18 @@ CCGACCAGGATTGCTCCGGTCTGAAGTCAGATCACGTAGGACTTTAATCGTTGAACAAACGAACCATTAA + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_2036_2630_1:0:0_3:3:0_af +TAATCACTTGTTCCTTAATTAGGGACTAGCATGAACGGCTAAACGAGGGTCCAACTGTCACTTATCTTTA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_2060_2566_0:0:0_0:2:0_89 TACTAGAAGAAATCGTAAATAGATAGAAACCGACCTGGATTGCTCCGGTCTGAACTCAGATCACGTAGGA + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_2091_2559_1:1:0_3:0:0_6e +TGTCTCTTATCTTTAATCAGTGAAATTGACCTTTCAGTGAAGAGGCTGAAATATAATAATAAGACGAGAA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_2143_2644_4:1:0_2:1:0_86 TATTATAATTAGATTTTATTCATAAATTAAGTTGAGAGCGCTTATTTGTAAGGTGTCTCTATTTCTCTTG + @@ -134,6 +130,18 @@ GGGTGGCCTCGGAGAATAAAAAATCCTCCGAATGCTTATACACCTAGACTTCCAAGTCAAAGTAAAATCA + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_2319_2795_0:0:0_0:1:0_56 +TCAACATATCTTATTGACCCAGATATATTTTGATCAACGGACCAAGTTACCCTAGGGATAACAGCGCAAT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_2789_3334_4:1:0_1:0:0_a3 +TCTACTCGCCATAGCCTTCCTAACATTAGCAGAACGCCAAATCTAAGGGTACATACAACTACGAAAATGC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_2849_3341_2:0:1_1:0:2_75 +GGGGGCCCGGTTTGTTTCTGCTAGGGTTTAGATAAATCATATTATGGCTGGGTCAGGCTGGCAGAAGTAA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_2870_3363_0:0:0_4:1:0_a9 ATTCTGGTTCTGTCAGGTCGAAGGGGGCCGGGTTTGTTTGTGCTAGGGTTGAGATCAATCATATTATGGC + @@ -146,16 +154,20 @@ GATTACTCCATTCTATGATCAGGATGAGCCTCAAACTCCAAATACTCACTATTCGGAGCTTTACGAGCCG + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_3174_3643_1:1:0_4:0:0_72 +AGTGTTAGGGGTAGAACGTTTTTACATAGAAGATTTATAAGTTGATCGTAACGGAAGCGTGGATAAGATT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_3213_3711_2:0:0_2:0:0_b2 TTAATAACTGGATCCTACTCTCTACAAACACTTATTACAACCCAAGAACACATATGATTACTTCTGCCAT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_2789_3334_4:1:0_1:0:0_a3 -TCTACTCGCCATAGCCTTCCTAACATTAGCAGAACGCCAAATCTAAGGGTACATACAACTACGAAAATGC +@chrM_3263_3744_2:0:2_1:1:0_1a +TTACTCTATCCAAGTAATTCTTTAATCAGACATATTTCTATATGTATGGTGGTACTCCCGCTGTAAAAAT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_2849_3341_2:0:1_1:0:2_75 -GGGGGCCCGGTTTGTTTCTGCTAGGGTTTAGATAAATCATATTATGGCTGGGTCAGGCTGGCAGAAGTAA +@chrM_3355_3923_3:1:0_1:1:0_55 +TAGGATTTATTAGTACGGGAAGGATTTAAACCAACGTTATCGGGGTATGGGCCGGATAGCTTAATTAGCT + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_3395_3924_1:1:0_1:1:0_64 @@ -166,54 +178,42 @@ AGCCGGCCCATTCGCGTTATTCTTTATAGCAGAGTACGCTAACATTATTGTAATAAACGCCCTAACAACT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_3174_3643_1:1:0_4:0:0_72 -AGTGTTAGGGGTAGAACGTTTTTACATAGAAGATTTATAAGTTGATCGTAACGGAAGCGTGGATAAGATT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_3617_4081_2:1:0_0:0:0_68 ATGAAAAAACTTTCTACCCCTGCCACAAGCATTATGTATGTGACATATTTCTTTACCAATTTTTACAGCG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_3263_3744_2:0:2_1:1:0_1a -TTACTCTATCCAAGTAATTCTTTAATCAGACATATTTCTATATGTATGGTGGTACTCCCGCTGTAAAAAT +@chrM_3773_4214_3:0:0_1:0:0_aa +CTATTAATGTTATGTTAAGGATAAGACCGTTTGTTTGTTGTTGAAATATTCATGTTCCTATTTGTTTATA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_3821_4257_1:0:0_2:0:0_69 GCTACCTCAACACCTTATCCTAATAGTAAGGTCAGCTAATTAAGCTATCGGGCCCATACCCCGAAAACGT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_3355_3923_3:1:0_1:1:0_55 -TAGGATTTATTAGTACGGGAAGGATTTAAACCAACGTTATCGGGGTATGGGCCGGATAGCTTAATTAGCT +@chrM_4014_4643_2:0:0_2:1:0_8b +ATATAGTTAGTATTGCTGGAGTTTTATTTCATAGAAGTGAGATTGAGTTTATGGTTAAAGAGTTATTTAG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_3773_4214_3:0:0_1:0:0_aa -CTATTAATGTTATGTTAAGGATAAGACCGTTTGTTTGTTGTTGAAATATTCATGTTCCTATTTGTTTATA +@chrM_4351_4852_1:0:0_0:2:0_2d +TATTTTTTAGTTATTGTTGGTTGGAAATATTGTTAGTGAAGTGGAATAAATTAGGCGAGTATAAACGAAT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_4389_4907_2:1:4_2:1:0_43 +TTACTTGTATTTTCATAGGGGCAAGAGGAGGACTTTAACCAAACACAAATACGAAAAATTGCCTATTCAG + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_4433_5040_0:2:0_2:1:2_70 CAAATACGAAAAATTATAGCCTGTTCATCAATTGCCCAAATAGGATGAATATTAGCAATTCTTCCTTACA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_4014_4643_2:0:0_2:1:0_8b -ATATAGTTAGTATTGCTGGAGTTTTATTTCATAGAAGTGAGATTGAGTTTATGGTTAAAGAGTTATTTAG +@chrM_4451_4928_3:2:0_2:0:0_28 +GGGGTAGGGTTATTGTGCTTATGATAGCTAGGGTGTACAATATTAGGTTGGGTTTAGTTTTTGTTTGGTG + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_4594_5169_2:0:0_1:0:0_27 CAACTCAATCTCACTTCTATGAAATAAAACTCCATCAATACTAACTATAATCTCACTGATATTACAATCC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_4351_4852_1:0:0_0:2:0_2d -TATTTTTTAGTTATTGTTGGTTGGAAATATTGTTAGTGAAGTGGAATAAATTAGGCGAGTATAAACGAAT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_4451_4928_3:2:0_2:0:0_28 -GGGGTAGGGTTATTGTGCTTATGATAGCTAGGGTGTACAATATTAGGTTGGGTTTAGTTTTTGTTTGGTG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_4944_5486_1:0:2_2:1:0_4e -TTACCTAGAAGTTTAGGATATACTAGTCCGCGAGCCTTCAAAGCCCTAAGAAAACACACCAGTTTAACCT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_4633_5057_1:1:0_0:1:0_3f TTGCATTCAATAGATGTAGGATGAAGTCTTTCAGTCCTTATCAGAAGTTAAACTTGTGTGTTTTCTTAGG + @@ -222,18 +222,18 @@ TAAAACAAACAACTGTCTAATTATAGCAACACTCATAGCAATAATAGCTCTACTATACCTATTCATTTAT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_5364_5814_0:2:0_0:0:0_ba -AAAGATATCGGAACCCTCTATCTACTATTCAGAGCCTGAGCGGGACTAGTGGGTACTGCACTAAGTATTT +@chrM_4740_5317_2:2:0_2:3:0_46 +GCTGAGTAAGCATTAGACTGTAAATCTAAAGACCCAGGTTTAAGTCCTTTTTTTACCAGAGGTCTTAAGG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_4944_5486_1:0:2_2:1:0_4e +TTACCTAGAAGTTTAGGATATACTAGTCCGCGAGCCTTCAAAGCCCTAAGAAAACACACCAGTTTAACCT + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_4989_5463_0:1:2_1:1:0_9a CACCTGGTTGACCTAATTCTGCGCGAATTAAAATACTTAGTGCAGTACCCACTATTCCCGCTGAGGCTCC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_5499_6008_3:0:0_1:2:0_53 -GTAACTGCCCATGCTTATGTTAAAATTTTCTTCATAGTAATACCAATAATAATTGGAGGGTTTGGAAACT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_5079_5628_3:1:0_1:0:0_45 TTATATTATTTATTCGTGGGAATGCTATATCTGGGGCTCCGATTATTAGTGGGACCAGTCAGTTTCCAAA + @@ -242,18 +242,38 @@ AACTTGTATTATTTATTCGAGGGAATGCTATATCTGGGGCTCCGATTATTAGTGGGACAAGTCAGTTTCC + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_5235_5764_4:3:0_1:1:0_18 +GACATGAATATCACCTTAAGAGCTCTGGTAAAAAAAGGACTTAAACGTGTGTGTTTAGCTTTACAGTGTA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_5364_5814_0:2:0_0:0:0_ba +AAAGATATCGGAACCCTCTATCTACTATTCAGAGCCTGAGCGGGACTAGTGGGTACTGCACTAAGTATTT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_5499_6008_3:0:0_1:2:0_53 +GTAACTGCCCATGCTTATGTTAAAATTTTCTTCATAGTAATACCAATAATAATTGGAGGGTTTGGAAACT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_5575_6058_0:0:0_0:1:0_3a +TAAACTTCTGGGTGGCCAAAGAATCAGAACAGATGCTGGTAGAGAATTGGGTCCCCTCCTCCAGCGGGAT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_5630_6213_1:0:0_0:1:0_91 TTTTTGACTCCTACCACCATCATTTCTCCTTCTCCTAGCATCATCAATAGTATAAGCAGGAGCAGGAACA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_5235_5764_4:3:0_1:1:0_18 -GACATGAATATCACCTTAAGAGCTCTGGTAAAAAAAGGACTTAAACGTGTGTGTTTAGCTTTACAGTGTA +@chrM_5666_6214_1:0:0_0:1:0_0 +CATACTGTGAATATGTGGTGGGCTCATACAATAAAGCCTAGAAAGCCAATAGACATTATTGCTCATACTA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_5735_6152_2:0:0_0:1:0_c1 AGCCCATGCAGGAGCATCAGTAGACCTAACAATTTTCTCCCTTCATTTAGCTGGAGTGTCATCTAATTTC + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_5817_6393_0:1:0_2:2:0_a8 +TTCCCGTTATACCACCAACTGTAAATAAGAAAATAAAGCATAAGGCTCATAGAATAGCTGGAGATCATTT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_5893_6392_1:2:0_0:2:0_22 TTATTACAGCCGTAGTGCTCCTATTATCACTACCAGTGCTACCCGCAGGCATTACTATACTACTAATAGA + @@ -262,20 +282,28 @@ AATAAGAAAATACAGCATAAGGCTCATAGTATAGCAGGAGATCATTTACTATTACCTCCGTATAGGGTTG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_5575_6058_0:0:0_0:1:0_3a -TAAACTTCTGGGTGGCCAAAGAATCAGAACAGATGCTGGTAGAGAATTGGGTCCCCTCCTCCAGCGGGAT +@chrM_5923_6445_3:2:0_1:2:0_b8 +ACATAGTATGTATCGTGAAGCACGATGTCAGTGGATGAGTTGGATAACACAATTCCGGTTAGACCACCAA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_6034_6497_2:3:0_0:1:0_4a +TATGATAGCAAACACCGCTCCCATTGATAGAACATAGTGGAAATGGGCTACTACATAGTATGTATCGTGA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_6047_6600_1:2:0_1:0:0_ac CCCAGAAGTTTATATTCTTATCCTCCCAGGATTTGGATTCATTTCACATGTAGTTCCTTACTACTCCGGA + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_6123_6649_2:0:0_2:0:0_b9 +GAGTAGCGTCGAGTTATTCCTGAAAGGCCCAGGAAATGTTGAGGGAAGAATGTTATGTTTACTCCTACGA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_6135_6597_0:0:1_2:0:0_90 TATATAGGAATAGTATGAGCAATAATGTACTATTGGCTTTCTAGGCTTTATTGTATGAGCCCACCACATA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_5666_6214_1:0:0_0:1:0_0 -CATACTGTGAATATGTGGTGGGCTCATACAATAAAGCCTAGAAAGCCAATAGACATTATTGCTCATACTA +@chrM_6242_6759_1:2:0_2:2:0_9b +TAGCAAAGGCCTGTCAAATTATAAAGATCATGATGAGAACAGCTGTTAGTGAAATAAATGATACAATAGA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_6286_6744_2:2:0_1:1:0_c4 @@ -286,34 +314,26 @@ TTTAGCTGACTTGCAACCCTATACGGAGGTAATATTAAATGATCTCCAGCTATACTATGAGCCTTATGCT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_5817_6393_0:1:0_2:2:0_a8 -TTCCCGTTATACCACCAACTGTAAATAAGAAAATAAAGCATAAGGCTCATAGAATAGCTGGAGATCATTT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_5923_6445_3:2:0_1:2:0_b8 -ACATAGTATGTATCGTGAAGCACGATGTCAGTGGATGAGTTGGATAACACAATTCCGGTTAGACCACCAA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6034_6497_2:3:0_0:1:0_4a -TATGATAGCAAACACCGCTCCCATTGATAGAACATAGTGGAAATGGGCTACTACATAGTATGTATCGTGA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_6468_6879_3:1:0_3:1:0_12 CTATCAATGGGAGCGGTGTATGCTATCATATCAGGATTTGTTCACTGATTCCCATTATTATCAGGCTTCA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6123_6649_2:0:0_2:0:0_b9 -GAGTAGCGTCGAGTTATTCCTGAAAGGCCCAGGAAATGTTGAGGGAAGAATGTTATGTTTACTCCTACGA +@chrM_6618_7072_3:0:0_2:0:0_88 +TAGCTCTTCTATAATAGGGGAAGTGGCGTCTAGTAGACCAAGTTGGAATGGGTAGGCCATATAAGATATA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_6660_7121_1:1:0_0:1:0_b6 +AGGAGCTAATTAGGAAAACAACTATTAGTGTGTGATCATGGAAATTTATTAGCTCTTCTATAATAGGGGA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_6680_7101_1:1:0_2:1:0_c +ACTATTATTGTGTGATCATGGAAATTTATTAGCTCATCTATAATAGGGGATGTGGCGTCTTGTAGACCAA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_6686_7208_1:1:0_0:0:0_3 CTCTTCTATAGTATCATTTAATTCACTAACAGCTGTTCTCATCATGATCTTTATAATTTGAGAGGCCTTT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6242_6759_1:2:0_2:2:0_9b -TAGCAAAGGCCTGTCAAATTATAAAGATCATGATGAGAACAGCTGTTAGTGAAATAAATGATACAATAGA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_6696_7251_0:2:0_1:2:0_16 GTATCATTTATTTCACTAACAGCTGTTCTCATCATGATCTTTATAATTTGAGAGGCCTTTGCTACAAAAC + @@ -326,6 +346,10 @@ AAACGAGAAGTAATATCAGTATCGTATGCTTCAACAAATTTAGAATGACTTCAAGGCTGCCCTCCACCAT + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_6802_7288_1:0:0_0:2:1_81 +GTTGTTGATTTTGGTCTATTATATATAGAATGCGTAGAGAGGGGAGAGCAATTATGATAAGGATCACAGC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_6823_7377_2:1:0_2:1:0_a4 TTCCACCATATCACACATTCGAGGAACCAACCTAAGTAAAATTAAAATAAGAAAGGAAGGAATCGAACCC + @@ -342,34 +366,14 @@ AAGCCAATCTCATATCCTATATGTCTTTCTCACTAAGGTATTAGTAAAATCAATTTCATAACTTTGTCAA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6618_7072_3:0:0_2:0:0_88 -TAGCTCTTCTATAATAGGGGAAGTGGCGTCTAGTAGACCAAGTTGGAATGGGTAGGCCATATAAGATATA +@chrM_6957_7445_0:1:0_0:1:0_84 +GCAGAACGACTCGGTTCTCAACTTCTAGCAGTCGTAGTTCACCAGGTTTTAGGTCGTTTGTTGGGATTAT + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_7024_7550_0:0:0_0:0:0_31 ATTCCAACTTGGTCTACAAGACGCCACATCCCCTATTATAGAAGAGCTAATAAATTTCCATGATCACACA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6680_7101_1:1:0_2:1:0_c -ACTATTATTGTGTGATCATGGAAATTTATTAGCTCATCTATAATAGGGGATGTGGCGTCTTGTAGACCAA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6660_7121_1:1:0_0:1:0_b6 -AGGAGCTAATTAGGAAAACAACTATTAGTGTGTGATCATGGAAATTTATTAGCTCTTCTATAATAGGGGA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6802_7288_1:0:0_0:2:1_81 -GTTGTTGATTTTGGTCTATTATATATAGAATGCGTAGAGAGGGGAGAGCAATTATGATAAGGATCACAGC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6957_7445_0:1:0_0:1:0_84 -GCAGAACGACTCGGTTCTCAACTTCTAGCAGTCGTAGTTCACCAGGTTTTAGGTCGTTTGTTGGGATTAT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_7513_8064_1:0:1_0:1:0_1f -CCTAGGACTTAAAACTGATGCCATCCCTAGGCCGACTAAATCAAGCAACAGAAACATCAAACCGACCAGG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_7076_7590_1:1:0_1:0:1_6f TAGAATAACCCTGGTCGGTTTGATGTTACTGTTGCTTGATTTAGTCGGCCTAGTGATGGCATCAGTTTTA + @@ -382,22 +386,14 @@ CGTTTAGTTGAAATAAGATAAATAGGGTAATTATTGATGAGATAATTGTGATACATCATGTTGATGTATC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_7862_8397_1:2:0_0:1:1_9c -TGCTAATGCCATTGGTTGAATAAATAGGCTAATCCTGTTTCAATAATAGTAAGTATTGGAATTAGTGAAA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8006_8435_2:1:0_2:1:0_95 -CTTCAATCCTATTCCCATCCTCAAAACGCCTAATCAACAACCGTCACCATTCATTCCAACACTTACTAGT +@chrM_7513_8064_1:0:1_0:1:0_1f +CCTAGGACTTAAAACTGATGCCATCCCTAGGCCGACTAAATCAAGCAACAGAAACATCAAACCGACCAGG + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_7711_8089_3:2:0_0:1:0_8 TGATAATAAGTTTAACTAGTCAGTGTTGGAATGAATGGAGACGGTTGTTGATTAGGCGTTTTGAGGATGG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8092_8707_0:2:0_2:0:0_25 -CAAATAATGCTAATCCACACACCAAAAGGACGAACATGGACCCTAATAATTGTTTCCCTAGTCATATTTA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_7734_8225_2:3:0_1:1:0_9d ATGGATAGTTGGGTAGTAGGTGTAAATGTATGTGGTAAAACGCCTAGGAGAATTGTTGATCCAATAAATA + @@ -406,12 +402,16 @@ AAGGAAGTGGGCAAGTGAGCTTCTTAGTGTGTGTCGGAAGGCAGTAATTACGGCTCCAGCTCATAGTGGA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8372_8947_0:1:0_2:3:0_63 -TATTTATTCAACCAATGGCATTAGCAGTCCGGCTTACAGCTAATATTACTGCAGGACACTTATTAATACA +@chrM_7862_8397_1:2:0_0:1:1_9c +TGCTAATGCCATTGGTTGAATAAATAGGCTAATCCTGTTTCAATAATAGTAAGTATTGGAATTAGTGAAA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8506_9018_2:0:0_3:2:0_92 -ATTATTTTACTTCTACTCACAATTGTAGAATTTGCAGTAGCATTAATTGAAGCCTACGTATTCACCCTCC +@chrM_8006_8435_2:1:0_2:1:0_95 +CTTCAATCCTATTCCCATCCTCAAAACGCCTAATCAACAACCGTCACCATTCATTCCAACACTTACTAGT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_8092_8707_0:2:0_2:0:0_25 +CAAATAATGCTAATCCACACACCAAAAGGACGAACATGGACCCTAATAATTGTTTCCCTAGTCATATTTA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_8156_8604_3:1:1_1:0:0_6b @@ -422,10 +422,34 @@ TATATCTAAGTATAGCCATTCCACTATGAGGTGGAGCCGTAAATACTGGCTTCCGACACACAGTAAGAAG + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_8286_8815_1:2:0_4:0:0_4f +TGGCCTTGGTAGGTTCCTTCCCGAATTACGTCTCTTCATCATTGATATATTTTGAGGATATTTGTGAGTA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_8372_8947_0:1:0_2:3:0_63 +TATTTATTCAACCAATGGCATTAGCAGTCCGGCTTACAGCTAATATTACTGCAGGACACTTATTAATACA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_8450_8856_3:2:1_2:0:0_6d GAGGAGCTACTCTCGTATTACTAAATATTAGCCCCCAAGAGCTACCATTACAATTATTATTTTACTACTA + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_8506_9018_2:0:0_3:2:0_92 +ATTATTTTACTTCTACTCACAATTGTAGAATTTGCAGTAGCATTAATTGAAGCCTACGTATTCACCCTCC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_8661_9208_2:0:0_0:1:0_14 +GTAGCCATGAAGACTGTAGAACCATAGATACCATCTGAAATGGAGAATGATGTTTCAAAGTATTCTGAAG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_8836_9300_1:0:0_0:0:0_7 +GATGTTTTGATGTGAAGTGAAATTTTAGTTGTCGTAGTAGGCAAACAATAAGGAATGTTGATCCAATAAT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_8874_9317_3:2:1_2:0:0_2b +GAAGTATATTTCTTTGCAGGATTCTTGTGAGCGTTCTATCTTTCGTTGGCCTCGTACCAACACATGCTCT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_8970_9477_1:1:0_0:1:0_c2 TCACCACATAACCCTCTAGAAGTCCCACTACTTAATACTTCAGTACTTCTAGGATCAGGTGTTTCAATTA + @@ -442,20 +466,16 @@ TGTAGGGACGAAACCGGAATCATATCGATTTGCTTTTTCTGAGTACAGATTTATTTGGGGGAGTCAGAAT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8661_9208_2:0:0_0:1:0_14 -GTAGCCATGAAGACTGTAGAACCATAGATACCATCTGAAATGGAGAATGATGTTTCAAAGTATTCTGAAG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_9172_9684_3:1:0_3:2:0_93 CAGCTGGTATCTATGGTTCTACAGTCTTCATGGCTACTGGATTCCAAGGACTCCAAGTAATTATTGGATC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8836_9300_1:0:0_0:0:0_7 -GATGTTTTGATGTGAAGTGAAATTTTAGTTGTCGTAGTAGGCAAACAATAAGGAATGTTGATCCAATAAT +@chrM_9268_9779_0:0:1_2:0:0_35 +AGTTCATTCATATGCTAGTCCTAGAGATAGAATTGTGACTAGAATAAAGGCTATAATTATTATAGTAGAG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8874_9317_3:2:1_2:0:0_2b -GAAGTATATTTCTTTGCAGGATTCTTGTGAGCGTTCTATCTTTCGTTGGCCTCGTACCAACACATGCTCT +@chrM_9419_9998_0:0:0_0:0:0_a5 +AATAAGGATAATACTATGCCTTCCAGGCATAGTAATGTGGATATTAGGTGAGAGCGAAATATAAGTGTCC + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_9427_9995_1:0:0_0:0:0_67 @@ -474,10 +494,6 @@ AAGGTCTGCACGTCTACCATTCTCAATAAAATTATTCTTGGTAGCAATTACATTTCTATTATTTGACGTA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_9268_9779_0:0:1_2:0:0_35 -AGTTCATTCATATGCTAGTCCTAGAGATAGAATTGTGACTAGAATAAAGGCTATAATTATTATAGTAGAG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_9807_10285_2:1:0_1:1:0_9 ATGGAAATTAGTTTAAAAAAAAATAATGATTTCGACTCATTAGATTATGATGCTGTTCATAATTACCAAT + @@ -494,20 +510,28 @@ ATGTTCATAATTACCAATATGCCATCTAGCTTCATCAACCTCACCATAGCCTTGTCACTATCACTTCAAG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_9419_9998_0:0:0_0:0:0_a5 -AATAAGGATAATACTATGCCTTCCAGGCATAGTAATGTGGATATTAGGTGAGAGCGAAATATAAGTGTCC +@chrM_9927_10433_3:0:0_1:0:0_49 +GTTATTATCTTATTTTAGGTGGTTTTGGCTAGCTATTAATATTAGTGGCAGTAATCAGGCTGTTAAAATA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_10069_10638_1:2:0_1:1:0_73 GTTTTCGCAGCCTGCGAAGCAGCAGTAGTACTAGCCCTACTAGTAAAAGTTTCAAACACGTACGGACCAG + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_10142_10667_2:0:0_1:1:0_78 +GATTAAGATGAGGGGAATTAGCAGTGGAATAGAACCGATTAGAGTATAAAATAGGAAATAAATCCCTGCG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_10302_10782_0:0:0_2:0:0_7c +TAAAAAGAAATGCTATTATTCATGCCAACCATAGTAAGTTGTTAGATCATGAAGCGTCTAAGGTGTGTGT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_10343_10880_3:0:0_3:2:0_17 TAATTTTAGAAGCATAGCTGCTAGACTTATTGACCCAGCAATTGGAGCTTCTACGTGGGCTTTTGGTCGT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_9927_10433_3:0:0_1:0:0_49 -GTTATTATCTTATTTTAGGTGGTTTTGGCTAGCTATTAATATTAGTGGCAGTAATCAGGCTGTTAAAATA +@chrM_10353_10841_3:0:0_2:3:0_65 +AATTGGAGCTTCTACGTGGGCTTTTGGTAGTCATAGGTGAACACCATATAATGGTATCTTAATAAGAAAA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_10386_10896_2:0:0_0:1:0_7a @@ -518,20 +542,12 @@ AAAAAAGATAATAACGTACTACAAAAACTCTCCAACTCAATACTAATCAGCTTACAAATTCTGCTAATCA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_10142_10667_2:0:0_1:1:0_78 -GATTAAGATGAGGGGAATTAGCAGTGGAATAGAACCGATTAGAGTATAAAATAGGAAATAAATCCCTGCG +@chrM_10608_11062_1:1:0_1:0:0_3e +GCCATAACAAGTGCTATGTGGCTAACTGAGGAGTAGGCGATTAGTGATTTTAAATCTGTTTGGCGTAAGC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_10302_10782_0:0:0_2:0:0_7c -TAAAAAGAAATGCTATTATTCATGCCAACCATAGTAAGTTGTTAGATCATGAAGCGTCTAAGGTGTGTGT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_10353_10841_3:0:0_2:3:0_65 -AATTGGAGCTTCTACGTGGGCTTTTGGTAGTCATAGGTGAACACCATATAATGGTATCTTAATAAGAAAA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_10608_11062_1:1:0_1:0:0_3e -GCCATAACAAGTGCTATGTGGCTAACTGAGGAGTAGGCGATTAGTGATTTTAAATCTGTTTGGCGTAAGC +@chrM_11003_11394_5:0:0_0:0:0_99 +TGTATATTGAGTATATACCTGTAATAATAATGTTAATTCCTATAAGAATAATGGTAAAGTTTGATCAAGA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_11082_11563_0:0:0_1:1:0_15 @@ -546,8 +562,8 @@ GGATCCACCGCCGTACTATAATCATGGCCCTAGGACTTCAAATGGTCTTCCCACTTATAGCCACTTGATG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_11003_11394_5:0:0_0:0:0_99 -TGTATATTGAGTATATACCTGTAATAATAATGTTAATTCCTATAAGAATAATGGTAAAGTTTGATCAAGA +@chrM_11221_11753_0:1:0_1:0:0_42 +GAAAATATTGATTACTTTTATTTGGATTTGCACCAAGGTTTTTGGTTCCTAAGACCACTGGATTACTATT + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_11654_12160_3:0:0_2:1:0_37 @@ -558,8 +574,8 @@ CATGGCTTTCTTAGTTTTATAGGATAATAGTAATCCATTGGTCTTAGGAACCCAAAACCTTGGTGCAAAT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_11221_11753_0:1:0_1:0:0_42 -GAAAATATTGATTACTTTTATTTGGATTTGCACCAAGGTTTTTGGTTCCTAAGACCACTGGATTACTATT +@chrM_11855_12332_0:1:0_0:0:0_be +TTCTCATGAGTTTATGTTTAGGGAAAATCAAACTATAGCTAAAATGAATCCGATGTCTCCGATGCGGTTA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_11933_12373_1:1:0_2:1:0_26 @@ -570,18 +586,42 @@ GAACTTAAACTAAGCTTCAAAACTGACTTTTTCTCTATCCTGTTTACATCTGTAGCCCTTTTTGTCACAT + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_12006_12486_1:1:0_2:1:0_c7 +AGTGTAGTAGTGCTGAAACTGGTGTAGGGCGTTCTATTGCTTATGGTAGTCAAGGGTGGAGGCCAAATTG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_12035_12474_2:1:0_0:2:0_5b +CTGAAACTGGTGTAGGGCGTTCTATTGCTGATGGTAGTCATGGGTGGAGGCCAAATTGTGCTGATTTTCG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_12076_12570_1:1:0_2:1:0_1b CAAACATCAAGCGATTCATTAAATAACTTACACTATTCCTGATTACCATGCTTATCCTCACCTCAGCCAA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_11855_12332_0:1:0_0:0:0_be -TTCTCATGAGTTTATGTTTAGGGAAAATCAAACTATAGCTAAAATGAATCCGATGTCTCCGATGCGGTTA +@chrM_12078_12606_4:1:0_0:1:0_24 +AACATCAAGCGATTCATTAAAAATCTTACACTATACCTGATTCCCATTCTTATCCTCACCTCAGCCAACA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_12121_12586_3:0:1_1:1:0_3b +CCATGCTTATCCTCACCTCAGCCAACAACATATTTCAACTTTTGATAGGCTGAGAAGGGGTTCGGGAATT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_12131_12680_1:1:1_2:0:0_bc +CCTCACCTCAGCCAACAACATATTTCAACTTATCATTGGCTGAGAAGGGGTGCGGGAATTAAATCTTTCC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_12133_12629_1:1:1_3:0:0_40 +TCACCTCAGCCAACAACATATTTCAACTTTTCAATGGCTGAGAAGGGGTGCGGGAATTAAATCTTTCCTA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_12276_12754_1:1:0_1:1:0_2a GACATCGGATTCATTTTCGCTATAGTTTGATTTTCCCTAAACATAAACTCATGAGAACTTCAACATATTA + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_12285_12789_0:1:0_1:1:0_5 +GGCTATGAATGATTGAGCCAGAGCATATAACGAGTATAGGTTTGAAGAATGCGTGGGTACAGATGTGTAG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_12294_12826_1:2:0_2:2:0_6 GCTATAGTTCGATTTTCCCTAAACATAAACTCATGAGAACTTCAACAGATTATATTGTCCAAAAACAACG + @@ -590,34 +630,14 @@ GTGATGTTTCCAATTTATCGGATGTTTTGTTCGTCTGCCAGGCTATGAATGATTTCGCCAGAGCATTTAA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12035_12474_2:1:0_0:2:0_5b -CTGAAACTGGTGTAGGGCGTTCTATTGCTGATGGTAGTCATGGGTGGAGGCCAAATTGTGCTGATTTTCG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12006_12486_1:1:0_2:1:0_c7 -AGTGTAGTAGTGCTGAAACTGGTGTAGGGCGTTCTATTGCTTATGGTAGTCAAGGGTGGAGGCCAAATTG +@chrM_12407_12905_1:1:0_1:1:0_98 +CCCTGTTAGGAATGGTATTCCTGAGAGGGCGAGGCTTCCGATTACTAGGCATGATGCTGTGAATGGTATG + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_12475_12979_2:0:0_0:0:0_51 CACTAGTACACTCAAGAACAATAGTAGTTGCAGGAATTTTCCTACTGGTCCGATTCCACCCCCTCACGAC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12121_12586_3:0:1_1:1:0_3b -CCATGCTTATCCTCACCTCAGCCAACAACATATTTCAACTTTTGATAGGCTGAGAAGGGGTTCGGGAATT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12078_12606_4:1:0_0:1:0_24 -AACATCAAGCGATTCATTAAAAATCTTACACTATACCTGATTCCCATTCTTATCCTCACCTCAGCCAACA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12133_12629_1:1:1_3:0:0_40 -TCACCTCAGCCAACAACATATTTCAACTTTTCAATGGCTGAGAAGGGGTGCGGGAATTAAATCTTTCCTA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12131_12680_1:1:1_2:0:0_bc -CCTCACCTCAGCCAACAACATATTTCAACTTATCATTGGCTGAGAAGGGGTGCGGGAATTAAATCTTTCC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_12645_13100_3:0:0_2:1:0_1d ATTGCCTTCTCTACATCAAGCGAACTAGGCCTGATCATCGTGACGCTAGGAATAAACCAACCACACCTAG + @@ -626,14 +646,6 @@ TTTTAAAAACATGGTATTGTTAGGACATGAATCCTGGTTGGTGGAATATTATATGAGATGACAAATCCTG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12285_12789_0:1:0_1:1:0_5 -GGCTATGAATGATTGAGCCAGAGCATATAACGAGTATAGGTTTGAAGAATGCGTGGGTACAGATGTGTAG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12407_12905_1:1:0_1:1:0_98 -CCCTGTTAGGAATGGTATTCCTGAGAGGGCGAGGCTTCCGATTACTAGGCATGATGCTGTGAATGGTATG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_12843_13287_1:1:0_2:2:0_6c CTTTATTTATTTATAGTTTTATGCTAAGGTTGTTTATTTCTAGTGCGATTAGGAATCCTAATACTGAAAT + @@ -654,10 +666,18 @@ TAATATTCCACCAACCAGCATTGCAGTCCTCACAATACCATGTTTTTAAAAAACCACAGGCCTAATTATT + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_13193_13631_2:3:1_0:0:0_82 +TTTTTACAAAACCCAGCCCTAATTATTTCAGTCTTAGGATTCCTAATCGCACTAGAACTAAACAACCTTA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_13292_13836_1:0:0_1:0:0_a7 TCCATATTCATCCTTCTCAACTTTACTGGGGTTTTTGCCATCTATTATTCACCGCATTACACCCATAAAA + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_13353_13784_0:0:0_1:2:0_33 +TGATTATAGAGGTTATTTTAATTTGTGTGCTTAATTATTATGATGAAGCTCGAGTAATTAATCTTGATGG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_13356_13863_1:0:0_2:0:0_1c ATAAAATCTCTCAACCTAAGCCTACAAACATCCCTAACTCTCCTAGACTTGATCTGGTTAGAAAAAACCA + @@ -666,16 +686,12 @@ CAAAATCCACCTCACCACTTCACACAAACATTACCACTTTAACAACCAACCAAAAAGGCTTAATTAACTT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_13193_13631_2:3:1_0:0:0_82 -TTTTTACAAAACCCAGCCCTAATTATTTCAGTCTTAGGATTCCTAATCGCACTAGAACTAAACAACCTTA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_13663_14160_0:0:0_2:1:0_6a TTCCAACATAACTCCAACATCATCAACCTCATACATCAACCAATCTCCCAAACCATCAAGATTAATTACT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_13353_13784_0:0:0_1:2:0_33 -TGATTATAGAGGTTATTTTAATTTGTGTGCTTAATTATTATGATGAAGCTCGAGTAATTAATCTTGATGG +@chrM_13815_14395_0:0:0_0:1:0_9e +GCGTGTATAAATCGGATTAGTCACCCGTAATTTACGTCTCGACAAATGTGTGTTACTGATGAAAAGGCTG + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_13826_14258_1:0:0_0:0:0_c5 @@ -686,6 +702,10 @@ AAACGATCCACCAAACCCTAAAACCATTAAACAACCAACAAACCCACTAACAATTAAACCTAACCTCCAT + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_14039_14391_3:0:0_3:0:0_4b +GTAAATATCGGATTAGTCACCCGAAATTTACGTGTCGACAAATGTGTGTTACTGATGAAAAGGCTGTTAT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_14070_14563_1:1:0_0:1:0_bd TTATTACTACACAGCATTCAACTGCGACCAATGACATGAAAAAACATCGTTGTAATTCAACTACAGAAAC + @@ -694,30 +714,34 @@ GAAAAAACATCGTTGCAATTCAACTACAGAAACACCTAATGCCAAACATACGAAAAACACACCCATTATT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14039_14391_3:0:0_3:0:0_4b -GTAAATATCGGATTAGTCACCCGAAATTTACGTGTCGACAAATGTGTGTTACTGATGAAAAGGCTGTTAT +@chrM_14125_14614_1:0:0_1:2:0_19 +CCAATATATGGGATGGCTGATCGGAGGTTTGTAATAACTGTGGTACCTCAGAATGATATTTGTCCTCAAG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_13815_14395_0:0:0_0:1:0_9e -GCGTGTATAAATCGGATTAGTCACCCGTAATTTACGTCTCGACAAATGTGTGTTACTGATGAAAAGGCTG +@chrM_14168_14690_2:0:0_2:0:0_2f +GTGGAAAGCGAAGCATCGGGTCAAGGTGGCTTTGTCTACTGATAAGCCCCCTCAAATTCATTCGACTAGG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_14379_14856_2:1:0_0:2:0_41 +TTACGAATATGATTAGGATACCTAGGATATCTTTGATTGTATAGTAGGGGTGACATGGAATTTTATCTGC + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_14458_14976_1:3:0_3:1:0_61 GATCATATACATTTATAGAAACCTGAAAAATTGGACTACTTCTACTGTTCGCAGTCATATCCACAGCAAT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14125_14614_1:0:0_1:2:0_19 -CCAATATATGGGATGGCTGATCGGAGGTTTGTAATAACTGTGGTACCTCAGAATGATATTTGTCCTCAAG +@chrM_14464_14944_1:1:0_0:1:0_b7 +TGGGGTGGGGTGTTTAGTGGATTAGCTGGTATGTAGTTGTCTGGGTCTCCTAGTATGTCTGGGAAAATTA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_14473_14928_1:3:0_1:2:0_1 +GTGGATTAGCTGGTATGTAGTTGTCTGGGTCTCCTAGTATGTCTGGGAAATTTAATCCTAGGGTTATGAG + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_14592_15040_1:0:0_0:1:0_39 CTATCAGCCATCCCATATATTGGAACAACCCTAGTCGAATGAATTAGAGGGGGCTTCTCAGTAGACAAAG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14168_14690_2:0:0_2:0:0_2f -GTGGAAAGCGAAGCATCGGGTCAAGGTGGCTTTGTCTACTGATAAGCCCCCTCAAATTCATTCGACTAGG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_14660_15119_2:0:0_3:0:0_b3 AGCCACCTTGACCCGATTCTTCGCATTCCACTTCATCTTACCATTTATTATCGGGGCCCTAGCAATCGTT + @@ -726,34 +750,34 @@ TTCGCTTTCCACTTCATCTTACCATTTATTATCGCGGCCCTAGCAATCGTTCACCTCTTCTTCGTCCACG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14379_14856_2:1:0_0:2:0_41 -TTACGAATATGATTAGGATACCTAGGATATCTTTGATTGTATAGTAGGGGTGACATGGAATTTTATCTGC +@chrM_14698_15195_1:2:0_0:0:0_c6 +CAATGATAATAAATGGGTGTTCTACTGGTTGGCCCCCAATTCAGGTTAAGATAAGTAGGTTGGCTACTAG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_14703_15218_4:2:0_3:0:1_a0 +TTTATTATCGCGGCCCTAGCAATCGTTCACCACTTCTTCCACCACGTAACAGGAAGAAACAACCCAACAG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_14792_15274_1:2:0_4:0:0_94 +AGAATTTTGTCTTCGATACTTCCTGAGCTTGGTAAAAGAATTAAGATGATTGAGAAGTATGAGATGGAGG + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_14825_15378_0:3:0_2:1:0_7d AGATATCCTAGGTATCCTAATCATATTCGTAATTCTCATAACCCTAGTATTAAATTTCCCAGACATACTA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14473_14928_1:3:0_1:2:0_1 -GTGGATTAGCTGGTATGTAGTTGTCTGGGTCTCCTAGTATGTCTGGGAAATTTAATCCTAGGGTTATGAG +@chrM_14851_15357_4:2:0_3:1:0_5d +GATGTCTTGAGAAGAGAAGCTCTTCATTTGAGGTTTACAAAACCAGAGTAATGTTTATACTATCAAGAGA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14464_14944_1:1:0_0:1:0_b7 -TGGGGTGGGGTGTTTAGTGGATTAGCTGGTATGTAGTTGTCTGGGTCTCCTAGTATGTCTGGGAAAATTA +@chrM_15077_15578_4:0:0_2:0:0_10 +GCAACGAAGCCTACTATTCCGCCCAATCACACAAATTTTGTACTGAATCCTATAAGCCAACCAACTTATC + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_15119_15633_0:0:0_2:1:0_13 CTGAATCCTAGTAGCCAACCTACTTATCTTAACCTGAATTGGGGGCCAACCAGTAGAACACCCATTTATT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14698_15195_1:2:0_0:0:0_c6 -CAATGATAATAAATGGGTGTTCTACTGGTTGGCCCCCAATTCAGGTTAAGATAAGTAGGTTGGCTACTAG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14792_15274_1:2:0_4:0:0_94 -AGAATTTTGTCTTCGATACTTCCTGAGCTTGGTAAAAGAATTAAGATGATTGAGAAGTATGAGATGGAGG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_15261_15717_1:0:0_0:2:0_29 GAAGACAAAATACTAAAATTATATCCCTGTCTTGATAGTATAAACATTACTCTGGTCTTGTAAACCTGAA + @@ -762,14 +786,6 @@ GAAGACAAAATACTAAAATTATATCCATGTCTTGATAGTATAAACATTACTCTGGTCTTGTAAACCTGAA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14851_15357_4:2:0_3:1:0_5d -GATGTCTTGAGAAGAGAAGCTCTTCATTTGAGGTTTACAAAACCAGAGTAATGTTTATACTATCAAGAGA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_15077_15578_4:0:0_2:0:0_10 -GCAACGAAGCCTACTATTCCGCCCAATCACACAAATTTTGTACTGAATCCTATAAGCCAACCAACTTATC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_15343_15804_3:2:1_2:1:0_11 TCTTCTCAAGACATCAAGAAGAAGGAGCTACACCCCACCAACCAGAACCCTAATCTGGTATTCTAATTCA + @@ -782,19 +798,3 @@ AGGACATAGGGTTTGATAGTTACTATTATATGTCTTTCAAGTTCTTAGTGTATTTGGGGTTTGGCATTAA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_4389_4907_2:1:4_2:1:0_43 -TTACTTGTATTTTCATAGGGGCAAGAGGAGGACTTTAACCAAACACAAATACGAAAAATTGCCTATTCAG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_4740_5317_2:2:0_2:3:0_46 -GCTGAGTAAGCATTAGACTGTAAATCTAAAGACCCAGGTTTAAGTCCTTTTTTTACCAGAGGTCTTAAGG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8286_8815_1:2:0_4:0:0_4f -TGGCCTTGGTAGGTTCCTTCCCGAATTACGTCTCTTCATCATTGATATATTTTGAGGATATTTGTGAGTA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14703_15218_4:2:0_3:0:1_a0 -TTTATTATCGCGGCCCTAGCAATCGTTCACCACTTCTTCCACCACGTAACAGGAAGAAACAACCCAACAG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 diff -r a0d039fa9771 -r a8d69aee190e test-data/samtools_fastx-out2-2.fastq.gz Binary file test-data/samtools_fastx-out2-2.fastq.gz has changed diff -r a0d039fa9771 -r a8d69aee190e test-data/samtools_fastx-out2-3.fastq --- a/test-data/samtools_fastx-out2-3.fastq Mon Mar 12 12:53:10 2018 -0400 +++ b/test-data/samtools_fastx-out2-3.fastq Fri Sep 28 04:39:19 2018 -0400 @@ -1,11 +1,3 @@ -@chrM_406_958_3:0:0_1:1:0_c3 -TGTGAAAATTCATTGTTAGGACCAAAACTCAATCACGAAAGTAATTCTAGTCATTTATAATCCACGACAG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_600_1083_1:1:0_0:0:0_77 -ACATTATATCCCTCTAGAGGAGCCTGTTCTATAATCGATAAACCCCGCTCTACCTCACCATCTCTTGCTA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_235_738_2:1:0_0:0:0_ab TGTTTGATTCTTTTGCTTACTTTAATACCTTTTTAGGGTTTGCTGAAGATGGCGGTATATAGGCTGAATT + @@ -14,28 +6,24 @@ TTTCTTCCCATTACATTGGCTACACCTTGACCTAACGTTTTTATGTTTGATTCTTTTGCTTACTTTAATA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_713_1102_2:0:0_0:0:1_50 -ATTAAAGTAAGCACAAGAATCAAACATAAAAACGATAGGTCAAGGTGTAGCCAATGAAATGGGAAGAAAT +@chrM_293_831_0:1:0_1:0:0_b +TAGTTTCATAAAGGGTATAGTAATGTTCTTTTATAAGAAAATGTAGCCCAATTCTTCCCATTTCATTGGC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_361_902_2:3:0_1:1:0_8e +CGTGTCAACAATAAATAAATAAATAGAATTAAAATCCAGCTTATATGTGAAAATTTATTGTTATGACCTA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_364_806_2:3:0_0:0:0_54 GTCAACAATAAATAAATAAATAGAATTAAAATCCACCTTATATGTGAAAATTTATTGATAGGACCTCAAC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_748_1226_0:0:0_3:2:0_a -TAGGTCAAGGTGTAGCCAATGAAATGGGAAGAAATGGGCTACATTTTCTTATAAAAGAACATTACTATAC +@chrM_406_958_3:0:0_1:1:0_c3 +TGTGAAAATTCATTGTTAGGACCAAAACTCAATCACGAAAGTAATTCTAGTCATTTATAATCCACGACAG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_293_831_0:1:0_1:0:0_b -TAGTTTCATAAAGGGTATAGTAATGTTCTTTTATAAGAAAATGTAGCCCAATTCTTCCCATTTCATTGGC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_787_1256_2:0:0_1:1:0_5a -TACATTTTCTTCTAAAAGAACATTACTATACCCTTTATGAAACTAAAGGACTAAGGAGGATTTAGTAGAA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_361_902_2:3:0_1:1:0_8e -CGTGTCAACAATAAATAAATAAATAGAATTAAAATCCAGCTTATATGTGAAAATTTATTGTTATGACCTA +@chrM_600_1083_1:1:0_0:0:0_77 +ACATTATATCCCTCTAGAGGAGCCTGTTCTATAATCGATAAACCCCGCTCTACCTCACCATCTCTTGCTA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_655_1179_0:1:0_1:2:0_60 @@ -46,14 +34,26 @@ TTGTTCTTACTTTTAATTAGTCTTTGATCTTTCCCTTGCGGTACTAGTTCTATATCTCCAAGATGTACGA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_835_1289_4:2:0_0:1:0_44 -GACTAAGGATGATTTAGTAGTAAATTACGAATAGAGATGTTAATTGGATTGAGCAATGAAGTACGCACAG +@chrM_713_1102_2:0:0_0:0:1_50 +ATTAAAGTAAGCACAAGAATCAAACATAAAAACGATAGGTCAAGGTGTAGCCAATGAAATGGGAAGAAAT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_748_1226_0:0:0_3:2:0_a +TAGGTCAAGGTGTAGCCAATGAAATGGGAAGAAATGGGCTACATTTTCTTATAAAAGAACATTACTATAC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_787_1256_2:0:0_1:1:0_5a +TACATTTTCTTCTAAAAGAACATTACTATACCCTTTATGAAACTAAAGGACTAAGGAGGATTTAGTAGAA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_820_1322_1:2:0_1:1:0_32 CTGTAATTCTTTTAGTTAGAAGTTTTCTAGTTAGTTCATAATGCAAAAGGTACAAGGTTTAATCTATGCT + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_835_1289_4:2:0_0:1:0_44 +GACTAAGGATGATTTAGTAGTAAATTACGAATAGAGATGTTAATTGGATTGAGCAATGAAGTACGCACAG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_846_1403_2:3:0_2:2:0_85 ATCTTCTCACTCTTTTGCCACATAGACGAGTTGATGCATAACATTGTTTTGAGGTAGCTCGTTTGGTTTC + @@ -62,10 +62,6 @@ TCCGATTATGAGAGGACATAAGTCGTAACATGTTAAGGATACTGGAAAGTGTGCTTGGAATAATCATAGT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_1415_1865_4:0:0_1:2:0_5e -GGTGAAAAGCCTCACGAGCATGGTGATAGGTGGTTACCCAAAAAATGAATTTAAGTTCCATTTTAAACTT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_1023_1543_3:0:0_1:0:0_30 AGCTGTCCCTCTTTTGGCTATAATCTAAACTTACATTTTGATTTTGTTGTTTTTTTAGCAAGTTTAAAAT + @@ -74,6 +70,18 @@ GGCCTACACCCAGAAGATTTCATGACCAATGAACACTCTGAACTAATCACCTAGCCCTAGCCCTAGACAA + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_1370_1912_0:0:0_1:1:1_79 +GAGTACCTTTTATCTTTTGGATCTTTCCTTTAGGCATTCCGGTGATGGGTTAACAGAGAAGTTATAGGTG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_1415_1865_4:0:0_1:2:0_5e +GGTGAAAAGCCTCACGAGCATGGTGATAGGTGGTTACCCAAAAAATGAATTTAAGTTCCATTTTAAACTT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_1550_2018_2:0:0_0:1:0_e +CAGGATACCGCGGCCGGTAAACTTTAGTCACTGGGCAGGCAGTGCCTCTAATACTTGTAATGCTAGAGGT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_1614_2107_1:1:0_2:0:0_2e AGCAGCGACCAATAAAGAAAGCGTTCAAGCTCAACATAAAATTTAAATTAATTCCATAATTTACACCAAC + @@ -86,22 +94,18 @@ TCCAGGCATACGCGTATAACAACTCGGATAACCGTTGTTAGTTAATCAGACTATAGGCAATAATCACACT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_1370_1912_0:0:0_1:1:1_79 -GAGTACCTTTTATCTTTTGGATCTTTCCTTTAGGCATTCCGGTGATGGGTTAACAGAGAAGTTATAGGTG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_1881_2335_1:1:1_1:1:2_34 AAAGGAAAAATCCAAAAGATAAAAGGAACTCGGCAAACAAGAACCCCGCCTGTTTACGAAAAACATCACC + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_1883_2385_1:1:1_0:0:0_1e +AGGAAAAATCCAAAAGATAAAAGGAACTCGGCAAACAAGAACCCCGCCTGTTTACCAAAAAGATCACCTC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_1915_2407_1:0:0_2:0:0_c0 CAAACAAGAACCCCGCCTGTTTACCACAAACATCACCTCTAGCATTACAAGTATTAGAGGCACTGCCTGC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_1550_2018_2:0:0_0:1:0_e -CAGGATACCGCGGCCGGTAAACTTTAGTCACTGGGCAGGCAGTGCCTCTAATACTTGTAATGCTAGAGGT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_2004_2537_1:0:0_2:0:0_83 GGCCGCGTTATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAATTAGGGACTAGCATGAACGG + @@ -114,10 +118,6 @@ ACTAGCATGAACGGCTAAACGAGGGTCCAACTGTCTCTTATCTTTAATCAGTGAAATTGACCTTTCAGTG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_1883_2385_1:1:1_0:0:0_1e -AGGAAAAATCCAAAAGATAAAAGGAACTCGGCAAACAAGAACCCCGCCTGTTTACCAAAAAGATCACCTC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_2091_2559_1:1:0_3:0:0_6e AGAAATCGTAAATAGATAGAAACCGACCTGGATTGCTCGGGTCTGAACACAGATCACGTAGGCCTTTAAT + @@ -126,12 +126,16 @@ ATAATACTAAGAGGAGAAGACCCAATGGAGCTTAAATTATCTAACTTATCTATTTAATCTATTAAACCTA + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_2253_2831_2:1:1_2:2:0_b4 +GATTTTGCGATCTGCTAATGTTAGGAAGGCTATGTCGATTAGAATGGGGACGAGGAGTGTGAGGATATTA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_2319_2795_0:0:0_0:1:0_56 GATTAGAATGGGGACGAGGAGTGTGAGGATATTAATAAAGAACACTATTAGGGAGAGGATTTGAACCTCT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_2253_2831_2:1:1_2:2:0_b4 -GATTTTGCGATCTGCTAATGTTAGGAAGGCTATGTCGATTAGAATGGGGACGAGGAGTGTGAGGATATTA +@chrM_2789_3334_4:1:0_1:0:0_a3 +CGGTTTGTTTCTGCTAGGGTTGAGATAAATCATATTATGGCTATGGGTCAGGCTGGCAGAAGTCATCATA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_2849_3341_2:0:1_1:0:2_75 @@ -154,14 +158,6 @@ TATGAAGTAACCATAGCTATTATCCTTTTTTCAGTTCTATTAATAAATGGATCCTACTGTCTACAAACAC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_2789_3334_4:1:0_1:0:0_a3 -CGGTTTGTTTCTGCTAGGGTTGAGATAAATCATATTATGGCTATGGGTCAGGCTGGCAGAAGTCATCATA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_3355_3923_3:1:0_1:1:0_55 -AAGCAGAATCAGAATTAGTCTCAGGGTTTAACGTAGAATCCGCAGCCGGCCCATTCGCGTTATTCTTAAT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_3213_3711_2:0:0_2:0:0_b2 ATTTCTATAAGTATGGTGGTACTCCCGCTGTAAAAATTGGTCAAGAAATATGTCACATACATAATGCTAG + @@ -170,44 +166,68 @@ CATATGATTACTTCTGCCAGCCTGACCCAGGCATAATATGATATATCTCAACCCTAGCAGAAACAAACCG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_3773_4214_3:0:0_1:0:0_aa -TAGGACAAAAGGCATTGAACCTACACTTAAGAATTCAAAATTCTCCGTGCTACCTAAACACCATATCCTA +@chrM_3355_3923_3:1:0_1:1:0_55 +AAGCAGAATCAGAATTAGTCTCAGGGTTTAACGTAGAATCCGCAGCCGGCCCATTCGCGTTATTCTTAAT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_3395_3924_1:1:0_1:1:0_64 +ATAGGATTTATTAGTACGGGAAGGATTTAAACCAACGTTTTCGGGGTATGGGCGGGATAGCTTAATTAGC + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_3398_3876_1:1:0_2:1:0_21 TGGGCCGGATAGCTTAATTATCTGACCTTACTATTAGGATAAGGTGTTAAGGTAGCACGGAGAATTTTGA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_3395_3924_1:1:0_1:1:0_64 -ATAGGATTTATTAGTACGGGAAGGATTTAAACCAACGTTTTCGGGGTATGGGCGGGATAGCTTAATTAGC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_3617_4081_2:1:0_0:0:0_68 TGCTGCTTCAGTTGATCGTGGGTTTTTTTTGTTGATTAGTATGGGGATAATTGCTAGTAGGCTGAATTCC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_4014_4643_2:0:0_2:1:0_8b -AATTCAGCCTACTAGCAATTCTCCCCATACTAATCAACCAAAAAAACCCACGATCAACTGAAGCAGCAAC +@chrM_3773_4214_3:0:0_1:0:0_aa +TAGGACAAAAGGCATTGAACCTACACTTAAGAATTCAAAATTCTCCGTGCTACCTAAACACCATATCCTA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_3821_4257_1:0:0_2:0:0_69 AATCCGAAGTGGAATGGGGGGAGGCCTAGTTTTATGGATAGGGCTATTAATGTTATGTTAAGGATAAGAC + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_4014_4643_2:0:0_2:1:0_8b +AATTCAGCCTACTAGCAATTCTCCCCATACTAATCAACCAAAAAAACCCACGATCAACTGAAGCAGCAAC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_4351_4852_1:0:0_0:2:0_2d CCCGCTACTCAACTCTACTATCATTTTAATACTAGCAATTACTTCTATTTTCATAGGGGCCTGAGGAGGA + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_4389_4907_2:1:4_2:1:0_43 +TTATAGCTAGGGTGGAAAATATTCGGTTGGGTTTAGTTTTTGTTTGGTGAGTTATTATTTTGGAGTTATT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_4433_5040_0:2:0_2:1:2_70 AGGATGAAGTGTTTCAGTCCTTATCAGGTTAAACTTGAGTGTTTTCTTAGGGCTTTGAAGGCTCGCGGAC + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_4451_4928_3:2:0_2:0:0_28 +GCCTATTCAGCAATTGCCCAAATAGGATGAATATTAGCAATTCTTCGTTACAACCCATCGCTCACACTAC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_4594_5169_2:0:0_1:0:0_27 +GCGGTAGAAGTAGATTGAAGCCAGTAATAGGGTATATAGCTGTTAACTAAATTTTCGTAGGTTTAATTCC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_4633_5057_1:1:0_0:1:0_3f ACTAACTATAATCTCACTGATCTTACTATCCCTAGGAGGCCTTCCACCACTAACCGGATTCTTACCAAAA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_4451_4928_3:2:0_2:0:0_28 -GCCTATTCAGCAATTGCCCAAATAGGATGAATATTAGCAATTCTTCGTTACAACCCATCGCTCACACTAC +@chrM_4723_5166_3:1:0_1:0:0_7f +GTAGAAGTAGATTGAAGCCAGTAATAGGGTATTTAGCTGTTAACTAAATTTTCGTAGTTTTAATTCCTGC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_4740_5317_2:2:0_2:3:0_46 +TAATAATAGCAACACTCATAGCAATAATAGCTCTACTATACCTATTCGTATATACTCGCCTAATTTATTC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_4944_5486_1:0:2_2:1:0_4e +AATTTGGTCATCTCCTAAAAGTGCACCTGGTTGACGTAATTCTGCGCGAATTAACATACTTAGTGCAGTA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_4989_5463_0:1:2_1:1:0_9a @@ -222,26 +242,6 @@ GACCTCAACTAGTTTGGCAGGAATTAAACCTACGAAACTTTAGTTAACAGCTAAATACCCTATTACTGGC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_4723_5166_3:1:0_1:0:0_7f -GTAGAAGTAGATTGAAGCCAGTAATAGGGTATTTAGCTGTTAACTAAATTTTCGTAGTTTTAATTCCTGC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_4594_5169_2:0:0_1:0:0_27 -GCGGTAGAAGTAGATTGAAGCCAGTAATAGGGTATATAGCTGTTAACTAAATTTTCGTAGGTTTAATTCC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_4944_5486_1:0:2_2:1:0_4e -AATTTGGTCATCTCCTAAAAGTGCACCTGGTTGACGTAATTCTGCGCGAATTAACATACTTAGTGCAGTA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_5575_6058_0:0:0_0:1:0_3a -TCCCACTAATAATCGGAGCCCCAGATATAGCATTCCCACGAATAAATAATATAAGTTTTTGACTCCTACC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_5666_6214_1:0:0_0:1:0_0 -AGCATCATCAATAGTAGAAGCAGGAGCAGGAACAGGATTAACAGTCTACCCACCTCTAGCCGGAAATCTA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_5235_5764_4:3:0_1:1:0_18 GTTAGGTCTACTGCTGCTCCTGCATGGGCTAGATTTCCGGCTAGGGGTGGGTAGACTGTTCATCCTGTTC + @@ -250,38 +250,38 @@ TAATTGCACCTAAAATAGATGACACTCCAGCTAAATGAAGGGAGAAAATTGTTAGGTCTACTGATGCTCC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_5817_6393_0:1:0_2:2:0_a8 -TTTATTACCACTATTATCAACATGAAACCCCCAGCCATAACACAGTATCAAACTCCACTATTTGTCAGAT +@chrM_5499_6008_3:0:0_1:2:0_53 +GTCCCCTCCTCCAGCGGGATCAAAGCAAGTTGTGTTTAGGTTGCGGACTATTAGTAGTATAGTAATGCCT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_5902_6370_4:1:0_3:2:0_8f -CCGTACTGCTGCTATTATCACTACCAGTTCTACCCGCAGGCATTACTATACTACTAACAGACCGCAACGA +@chrM_5575_6058_0:0:0_0:1:0_3a +TCCCACTAATAATCGGAGCCCCAGATATAGCATTCCCACGAATAAATAATATAAGTTTTTGACTCCTACC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_5499_6008_3:0:0_1:2:0_53 -GTCCCCTCCTCCAGCGGGATCAAAGCAAGTTGTGTTTAGGTTGCGGACTATTAGTAGTATAGTAATGCCT +@chrM_5630_6213_1:0:0_0:1:0_91 +ATACTGTGAATATGTGGTGGGCTCATACAATAAAGCCTAGAAAGCCAATAGACATTATTGCTCATACTAT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_5666_6214_1:0:0_0:1:0_0 +AGCATCATCAATAGTAGAAGCAGGAGCAGGAACAGGATTAACAGTCTACCCACCTCTAGCCGGAAATCTA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_5735_6152_2:0:0_0:1:0_c1 TCATACTATTCCTATATAGCCGAAAGGTTCTTTTTTTCCGGAGTAGTAAGTAACTACATGTGAAATGATT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6123_6649_2:0:0_2:0:0_b9 -GAACCTTTCGGCTATATAGGAATAGTATGAGCAATAATGTCTATTGGCTTTCAAGGCTTTATTTTATGAG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_5630_6213_1:0:0_0:1:0_91 -ATACTGTGAATATGTGGTGGGCTCATACAATAAAGCCTAGAAAGCCAATAGACATTATTGCTCATACTAT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6242_6759_1:2:0_2:2:0_9b -TACATCAGCCACTATAATTATCGCAAAACCTACCGGTGTCAAAGTATTTAGCTGACTTGCAACCCTATAC +@chrM_5817_6393_0:1:0_2:2:0_a8 +TTTATTACCACTATTATCAACATGAAACCCCCAGCCATAACACAGTATCAAACTCCACTATTTGTCAGAT + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_5893_6392_1:2:0_0:2:0_22 TCCCGTTAGACCACCAACTGTAAATAAGAAAATAAAGCATAAGGCTCATAGTATAGCTGGAGATCATTTA + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_5902_6370_4:1:0_3:2:0_8f +CCGTACTGCTGCTATTATCACTACCAGTTCTACCCGCAGGCATTACTATACTACTAACAGACCGCAACGA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_5923_6445_3:2:0_1:2:0_b8 TACCAGTGCTACCCGCAGGCATTACTATACTACTAACAGAGCGCAACCTACACAGAACTTGCTTTGATCC + @@ -290,12 +290,32 @@ GATTCTATGAGCACCCAGAAGTTTAAATTCTTATCCTCCCAGGATTTGGATTCATTTCACATGTAGTTAC + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_6047_6600_1:2:0_1:0:0_ac +ATGTTATGTTTACTCCTACGAATATGATGGCGAAGAGGGCTTTTGCTCATGTGTCATCTAGGGTGAAGCC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_6123_6649_2:0:0_2:0:0_b9 +GAACCTTTCGGCTATATAGGAATAGTATGAGCAATAATGTCTATTGGCTTTCAAGGCTTTATTTTATGAG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_6135_6597_0:0:1_2:0:0_90 TTATGTTTACTCCTACGAATATGATGGCGAAGTGGGCTTTAGCTCATGTGTCATCTAGGGTGCAGCCTGA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6047_6600_1:2:0_1:0:0_ac -ATGTTATGTTTACTCCTACGAATATGATGGCGAAGAGGGCTTTTGCTCATGTGTCATCTAGGGTGAAGCC +@chrM_6242_6759_1:2:0_2:2:0_9b +TACATCAGCCACTATAATTATCGCAAAACCTACCGGTGTCAAAGTATTTAGCTGACTTGCAACCCTATAC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_6286_6744_2:2:0_1:1:0_c4 +AAATTATAAAGATCATGATGAGAACAGCTGTTAGTGAAATAAATGATAGTATAGAAGAGACAGTGTTTCA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_6288_6809_0:2:0_1:1:0_a6 +TCATTCTAAATTTGTTGAAGGATACGATACTGATATTACTTCTCGTTTTGTAGCAAAGGCCTCTCAAATT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_6468_6879_3:1:0_3:1:0_12 +TCCTTTCTTATTATACTTTTACATAGGTTGGTTCCTCGAATGTGTGATAAGGTTGAAGGCAGCCATGAAG + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_6618_7072_3:0:0_2:0:0_88 @@ -306,34 +326,54 @@ GATGCTTACACCACATGAAACACTGTCTCTTCTATAGTATGATTTATTTCACTAACAGCTGTTCTCATCA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6286_6744_2:2:0_1:1:0_c4 -AAATTATAAAGATCATGATGAGAACAGCTGTTAGTGAAATAAATGATAGTATAGAAGAGACAGTGTTTCA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_6680_7101_1:1:0_2:1:0_c CACTGTCTCTTCTATAGTATCCTTTATTTCACTAACAGCTGTTCTCATCATGATCTTTATAATTTGAGAG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6288_6809_0:2:0_1:1:0_a6 -TCATTCTAAATTTGTTGAAGGATACGATACTGATATTACTTCTCGTTTTGTAGCAAAGGCCTCTCAAATT +@chrM_6686_7208_1:1:0_0:0:0_3 +TTCAAATGGTTTCAACTTCTTGTGCATCTATTGTGCTTGTATGTGTTAGTTTTGTTGTTAATATTAGCGA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_6696_7251_0:2:0_1:2:0_16 +GAGGGGAGAGCAATTATGATAAGGATCACAGCTGGTAGAATACTTCAAATGGTTTCAACTTCTTGTGCAA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_6717_7185_3:1:0_2:0:0_71 +GCATCTATTGTGGTTGTATGTGTTAGTTTTGTTGTTAATATTAGCGAGATGATATAGAGGAGTAAGGAGC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_6762_7357_1:0:0_2:1:0_8a +GTCTTCATAGACAGTATATTCGTAGCTTCAGTAACCTTGGTGCCCTATGGTTTTAACGGTTAATACGGGG + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_6802_7288_1:0:0_0:2:1_81 TAGAATGACTTCATGGCTGCCCTCCACCATATCACACATTCGAGGAACCAACCTCTGTAAAAGTAAAATA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6468_6879_3:1:0_3:1:0_12 -TCCTTTCTTATTATACTTTTACATAGGTTGGTTCCTCGAATGTGTGATAAGGTTGAAGGCAGCCATGAAG +@chrM_6823_7377_2:1:0_2:1:0_a4 +ATATATGAATCCAAGCATACGTCTTCATAGTCCGTATATTCGTAGCTTCAGTATCATTGGTGCCCTATGG + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_6856_7411_3:0:0_3:1:1_4 TAGTTCACCAGGTTTTAGGTCGTTTGTTGGCTTCTATATGAATGAAAGCATACGTCTTCATAGTCAGTAT + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_6883_7266_2:1:0_0:1:0_b1 +TATAGAATGCGTAGAGAGGGGAGAGCAATTATGATAAGGATTACAGCTGGTAGAATAGTTCAAATAGTTT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_6908_7324_0:3:0_0:2:1_52 +ACATTGGTGCCCTATGGTTTTAACGGTTAATACGGGGTTGTTGATTTTGGTCTATTATATATAGAATGCG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_6957_7445_0:1:0_0:1:0_84 TCAATTTCATAACTTTGTCAAAGTTAAATTATAGATCAATAATCTATATATCTTATATGGCCTACCCATT + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_7024_7550_0:0:0_0:0:0_31 +TTAGTCGGCCTGGGATGGCATCAGTTTTAAGTCCTAGGGAGGGGACTGCTCATGAGTGGAGGACGTCTTC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_7076_7590_1:1:0_1:0:1_6f AATTTCCATGATCACACACTAATAGTTGTTTTCCTAATTAGCTCCTTCGTCCTCTATATCATCTCGCTAA + @@ -342,50 +382,10 @@ TATTCCTAATTAGCTCCTTAGTCCTCTATATCATCTCGCTAATATTAACACCAAAACTAACACATACAAG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6717_7185_3:1:0_2:0:0_71 -GCATCTATTGTGGTTGTATGTGTTAGTTTTGTTGTTAATATTAGCGAGATGATATAGAGGAGTAAGGAGC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6686_7208_1:1:0_0:0:0_3 -TTCAAATGGTTTCAACTTCTTGTGCATCTATTGTGCTTGTATGTGTTAGTTTTGTTGTTAATATTAGCGA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6696_7251_0:2:0_1:2:0_16 -GAGGGGAGAGCAATTATGATAAGGATCACAGCTGGTAGAATACTTCAAATGGTTTCAACTTCTTGTGCAA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6883_7266_2:1:0_0:1:0_b1 -TATAGAATGCGTAGAGAGGGGAGAGCAATTATGATAAGGATTACAGCTGGTAGAATAGTTCAAATAGTTT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6908_7324_0:3:0_0:2:1_52 -ACATTGGTGCCCTATGGTTTTAACGGTTAATACGGGGTTGTTGATTTTGGTCTATTATATATAGAATGCG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6762_7357_1:0:0_2:1:0_8a -GTCTTCATAGACAGTATATTCGTAGCTTCAGTAACCTTGGTGCCCTATGGTTTTAACGGTTAATACGGGG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_7289_7847_3:2:0_1:1:0_7e CCCGTATTAACCGTTAAAACCATAGGGCACCAATGTTACTTAAGCTACGAATAAACTGACTATGAAGCCG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_6823_7377_2:1:0_2:1:0_a4 -ATATATGAATCCAAGCATACGTCTTCATAGTCCGTATATTCGTAGCTTCAGTATCATTGGTGCCCTATGG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_7024_7550_0:0:0_0:0:0_31 -TTAGTCGGCCTGGGATGGCATCAGTTTTAAGTCCTAGGGAGGGGACTGCTCATGAGTGGAGGACGTCTTC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_7759_8313_1:2:0_1:3:0_20 -TAGTGATATGCCAGAACTAGATACATCAACAAGATTTATTACAATTATCTCATCAATAATTACCCTATTT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_7862_8397_1:2:0_0:1:1_9c -TTCCCACTGGCACCTTCAGCAAAATCACTAACAAACATAAAAGTAAACACCCCTTGAGAATTAAAATGAA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_7513_8064_1:0:1_0:1:0_1f TTGGAAAGAATGGAGACGGTTTTTGATTAGGCGTTTTGAGGATGGGAATAGGATTGAAGGAAATATAATG + @@ -398,16 +398,20 @@ AAAGTAAGAGACCTTAAAAACTCCATAGTGATATGCCAGAACTAGATACATCAACATTATTTATTACAAT + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_7759_8313_1:2:0_1:3:0_20 +TAGTGATATGCCAGAACTAGATACATCAACAAGATTTATTACAATTATCTCATCAATAATTACCCTATTT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_7862_8397_1:2:0_0:1:1_9c +TTCCCACTGGCACCTTCAGCAAAATCACTAACAAACATAAAAGTAAACACCCCTTGAGAATTAAAATGAA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_8006_8435_2:1:0_2:1:0_95 AATAAGTGTCCTGCAGTAATATTAGCTTTAAGCCGGACTGCTAATGCGATTGGTTGAATAAATAGGCTAA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8372_8947_0:1:0_2:3:0_63 -CCTCCTAGCTCATGTGTTGGTACGAGGCCAGAAAGATCGAACTCTCAGAAGAATCCTGCAAAGAAAAATA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8506_9018_2:0:0_3:2:0_92 -GAAGTACTGAAGTATTTAGTAGTGGGACTTCTAGAGGTTTAAGTGGTGAAATTCTTGTTGGAGGTGAGCC +@chrM_8092_8707_0:2:0_2:0:0_25 +CATATTACTAGACCTGATGTTAGAAGTAGGGCTGAAAAGGCTCGAGTTAATGGTCATGGACTTGGATTAA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_8156_8604_3:1:1_1:0:0_6b @@ -418,20 +422,44 @@ CTGATGTTAGAAGGAGGGCTGAAAAGGCTCCAGTTAATGGTCATGGCCTTGGATTAACTATGTGCTATGC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8092_8707_0:2:0_2:0:0_25 -CATATTACTAGACCTGATGTTAGAAGTAGGGCTGAAAAGGCTCGAGTTAATGGTCATGGACTTGGATTAA +@chrM_8286_8815_1:2:0_4:0:0_4f +ACTAAGAAGCTCACTTGCCCACTTCCTTCCACAAGGAACTCCAAATTCACTAATTCCAATACTTACTATT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_8372_8947_0:1:0_2:3:0_63 +CCTCCTAGCTCATGTGTTGGTACGAGGCCAGAAAGATCGAACTCTCAGAAGAATCCTGCAAAGAAAAATA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_8450_8856_3:2:1_2:0:0_6d +TTATACGATATCGTAGACCTTTTTGTACAATAGGAGTGTGGTGGCCTTGGTAGGTTCCTTCACGAATTAC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_8506_9018_2:0:0_3:2:0_92 +GAAGTACTGAAGTATTTAGTAGTGGGACTTCTAGAGGTTTAAGTGGTGAAATTCTTGTTGGAGGTGAGCC + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_8661_9208_2:0:0_0:1:0_14 ACTGGAGCCTTTTCAGCGCTCCTTCTAACATCAGGTCTAGAAATATGATTTCACTATAATTCAATTACAC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8450_8856_3:2:1_2:0:0_6d -TTATACGATATCGTAGACCTTTTTGTACAATAGGAGTGTGGTGGCCTTGGTAGGTTCCTTCACGAATTAC +@chrM_8836_9300_1:0:0_0:0:0_7 +AAGGACTACGATATGGTATAATTCTATTCATCGTCTCGGAAGTATTTTTCTTTGCAGGATTCTTCTTAGC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_8874_9317_3:2:1_2:0:0_2b +GGCTTCAAATCCGAAGTGATGTTTTGATGTGAAGTGAAATATTAGTTGTCGTAGTAGGCACACAATAAGG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8836_9300_1:0:0_0:0:0_7 -AAGGACTACGATATGGTATAATTCTATTCATCGTCTCGGAAGTATTTTTCTTTGCAGGATTCTTCTTAGC +@chrM_8970_9477_1:1:0_0:1:0_c2 +TAACAGTGTACAGGTTAATTACTCTCTTCTGGGTTTATTCAGAATCTACTAATTGGAAGTCAGTTATCTT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_8971_9479_3:1:0_1:1:0_8d +GATAACAGTGTACAGGTTAATTACTCTCTTCTGGGTTTATTCAGAATCTACTAATTGGCAGTCAGTTATC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_9092_9613_1:0:1_2:0:0_2 +GAGAATGGTAGACGTGCAGAGCTAGTAGGGTCGAATCCGCATTCATATGGATTTTCTTTTTCTGAGTACA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_9120_9590_2:0:0_4:1:0_58 @@ -442,42 +470,18 @@ GCAGTGGAATTAGTATAGCAATTTCTATGTCAAATAATAGAAATGTAATTGCTACCAAGAAAAATTTTAT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8874_9317_3:2:1_2:0:0_2b -GGCTTCAAATCCGAAGTGATGTTTTGATGTGAAGTGAAATATTAGTTGTCGTAGTAGGCACACAATAAGG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_9268_9779_0:0:1_2:0:0_35 GACAACTAAAATTTCACTTCACATCAAAACATCACTTCGGATTTGAAGCCGCAGCCATGATACTGACATT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8970_9477_1:1:0_0:1:0_c2 -TAACAGTGTACAGGTTAATTACTCTCTTCTGGGTTTATTCAGAATCTACTAATTGGAAGTCAGTTATCTT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8971_9479_3:1:0_1:1:0_8d -GATAACAGTGTACAGGTTAATTACTCTCTTCTGGGTTTATTCAGAATCTACTAATTGGCAGTCAGTTATC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_9419_9998_0:0:0_0:0:0_a5 CTTCCAATTAGTAGATTCTGAATAAACCCAGAAGAGAGTAATTAACCTGTACACTGTTATCTTCATTAAT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_9092_9613_1:0:1_2:0:0_2 -GAGAATGGTAGACGTGCAGAGCTAGTAGGGTCGAATCCGCATTCATATGGATTTTCTTTTTCTGAGTACA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_9590_10121_3:0:0_4:1:0_a1 -GAAACTTTTACTAGTAGGGCTAGTCCTACTGCTGCTTCGCATGCTTCGAAAACACAGATGGTGATGGGGA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_9427_9995_1:0:0_0:0:0_67 AAGGATAATACTATGCCTTCCAGGCATAGTAATGTGGATATTAGGTGAGAGCGAAATATAAGTGTCCCTA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_9927_10433_3:0:0_1:0:0_49 -AGGGACACATATATTTCGCTCTCACCTAATATCCAGATTACTATGCCTGGCAGGCATAGTATTATCCTTA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_9516_10028_1:1:0_0:1:0_66 GAGTTTAGGGAAGTTACTGAAGTTATAATATATAAGGATAATACTATGCCTTCCAGGCATAGTAATGTGG + @@ -486,24 +490,36 @@ TTGAGATTTTGGACGTAATCTGTTCCGTACGTGTATGAAACTTTTACTAGTAGGGCTAGTCCTACTGCTG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_10142_10667_2:0:0_1:1:0_78 -ACGTCCAAAATCTCAACCTACTACAATGCTAAAAATTCTTCTTCCCTCACTAATGCTACTACCAGTAACC +@chrM_9590_10121_3:0:0_4:1:0_a1 +GAAACTTTTACTAGTAGGGCTAGTCCTACTGCTGCTTCGCATGCTTCGAAAACACAGATGGTGATGGGGA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_9807_10285_2:1:0_1:1:0_9 GTTAGGGTGGTTAAACTAATTAGAAAACTATATGAGGTTACGTTTTTTCAGGTTTTTTTAGGGCTTGATA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_9859_10294_4:0:0_2:1:0_96 -CATAGAAGTGTTCGGCTGGTAAAACTAATTAGAAAACTATATGAGGTTACGTTTTTTCAGGTTTTTTTAG +@chrM_9837_10360_1:0:0_3:0:0_9f +AATGGTGTGGATAGGGGGTCTGAGGATAATATATTTGAAACGTTTTTATAAATTTCGTCGGTTTGTCATA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_9852_10323_2:0:0_3:1:0_48 AAAAGTTTATATAAATTTCGTCGGTTTGTGATAGAAGTGTTAGGCTGGTTAAACTCATTAGAAAACTATA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_9837_10360_1:0:0_3:0:0_9f -AATGGTGTGGATAGGGGGTCTGAGGATAATATATTTGAAACGTTTTTATAAATTTCGTCGGTTTGTCATA +@chrM_9859_10294_4:0:0_2:1:0_96 +CATAGAAGTGTTCGGCTGGTAAAACTAATTAGAAAACTATATGAGGTTACGTTTTTTCAGGTTTTTTTAG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_9927_10433_3:0:0_1:0:0_49 +AGGGACACATATATTTCGCTCTCACCTAATATCCAGATTACTATGCCTGGCAGGCATAGTATTATCCTTA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_10069_10638_1:2:0_1:1:0_73 +TAGAACCGATTAGAGTATAAAATAGGAAATAAATCCCTGCGTTTAGGCGTTCAGTTTGGTTGCCTCATCG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_10142_10667_2:0:0_1:1:0_78 +ACGTCCAAAATCTCAACCTACTACAATGCTAAAAATTCTTCTTCCCTCACTAATGCTACTACCAGTAACC + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_10302_10782_0:0:0_2:0:0_7c @@ -518,14 +534,6 @@ ACACCATTAATTATTTTAACAGCCTGATTACTGCCACTAATATTAATAGCTAGCCCAAACGACGTAAAAA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_10069_10638_1:2:0_1:1:0_73 -TAGAACCGATTAGAGTATAAAATAGGAAATAAATCCCTGCGTTTAGGCGTTCAGTTTGGTTGCCTCATCG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_10608_11062_1:1:0_1:0:0_3e -TATTTCCTATTTTATACCCTAATCGGTTCGATTCCACTTCTAATTGCCCTCATCTTAATCCAAAACCATG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_10386_10896_2:0:0_0:1:0_7a TTATTCCGTAACTACCTAATTTTAGAAGAATAGCTGCTAGAATTATTGACCCAGCAATTGGAGCTTCTAC + @@ -534,8 +542,8 @@ TATATTTTGTTAGTGGGTCTAGAATAATGGAGATGCGAAATAATCCGTAACTACCTAATTTTAGAAGAAT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_11221_11753_0:1:0_1:0:0_42 -TCCCACTTATAGCCACTTGATGACTGATAGCAAGTCTAGCTAATCTAGCTCTACCCCCTTCAATCAATCT +@chrM_10608_11062_1:1:0_1:0:0_3e +TATTTCCTATTTTATACCCTAATCGGTTCGATTCCACTTCTAATTGCCCTCATCTTAATCCAAAACCATG + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_11003_11394_5:0:0_0:0:0_99 @@ -546,18 +554,34 @@ TTTTGTAGACTATATTCACATATTGTCCGGCCTGTAATTAGTTTTGGACTGGTAGTTAGAAGAATAAGTG + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_11137_11674_1:0:0_0:1:0_f +AAGTAAGAAAGCCATGTCTTTAAACATGGAAGCATGAATTAGCAGTTCTTGCAATCTTTCTTGGTGAATA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_11173_11673_2:1:0_0:0:0_3c AGTAAGAAAGCCATGTTTTTAAACATGGAAGCATGAATTAGCAGTTCTTGCAATCTTTCTTGGTGAATAA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_11137_11674_1:0:0_0:1:0_f -AAGTAAGAAAGCCATGTCTTTAAACATGGAAGCATGAATTAGCAGTTCTTGCAATCTTTCTTGGTGAATA +@chrM_11221_11753_0:1:0_1:0:0_42 +TCCCACTTATAGCCACTTGATGACTGATAGCAAGTCTAGCTAATCTAGCTCTACCCCCTTCAATCAATCT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_11654_12160_3:0:0_2:1:0_37 +AGTTGAAATATGTTGTTGGCCGAGGTGAGGATAAGCATGGTAATCAGGAATAGAGTAAGATAATTAATGA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_11659_12180_2:0:0_1:1:0_47 +CCCCTTCTCATCCAATGAAAAGTTGAAATATGTTGTTGGCCGAGGTGAGGATAAGCATGGTAATCAGGAA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_11855_12332_0:1:0_0:0:0_be ATCAATCAAATTCTCCTTCATTATTAGCCTCTTACCCCTATTAATATTTTTCCACAATTATATAGAATAT + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_11933_12373_1:1:0_2:1:0_26 +ATTAGATTGTCGTTGTTGTTGGAGAATATAATAAGTTGAAGTTCTCATGAGTTTAAGTTTAGGGAAAATC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_11964_12441_1:0:0_3:3:0_4d GTAGTCATGGGTTGAGGCCAAAATGTGCTGATTTTCGTGTAGCAGAGATTAATAGTCCTATAAGTGGAAT + @@ -570,20 +594,36 @@ ATCAATTATACAATTCTCTTCATGAAATATACACTCATACCCAAACATCAAGCGATTCATTAAATATCTT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_11654_12160_3:0:0_2:1:0_37 -AGTTGAAATATGTTGTTGGCCGAGGTGAGGATAAGCATGGTAATCAGGAATAGAGTAAGATAATTAATGA +@chrM_12076_12570_1:1:0_2:1:0_1b +TCGTTGTTAAAATACAGTTATTATTAGTCGTGAGGGGGTGGAATCGGACCAGTAGGAAAATTGCTGCAAC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_12078_12606_4:1:0_0:1:0_24 +CTGTAAATAATGTGGTTAGGGCTCCGAGGCAAAGTATAGTTGTTAAAATACAGTTATTATTAGTCGTGAG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_11659_12180_2:0:0_1:1:0_47 -CCCCTTCTCATCCAATGAAAAGTTGAAATATGTTGTTGGCCGAGGTGAGGATAAGCATGGTAATCAGGAA +@chrM_12121_12586_3:0:1_1:1:0_3b +GCTCCGAGTCAAAGTATAGTTGTTAAAATACAGTTATTATTAGTCGTGAGGGGGTGGAATCGGACCAGTA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_12131_12680_1:1:1_2:0:0_bc +TATCAGGCCTAGTTGGCTTGATGTAGAGAAGGCAATGATTTTTTTGATGTCGTTTTGGGTGAGATCCCAA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_12133_12629_1:1:1_3:0:0_40 +GTTTTGGGTTAGAGCACCCATAGCTGTAAATAATGTGGTTAGGGCTCCGAGGCAAAGTATAGTTGTTAAA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_12276_12754_1:1:0_1:1:0_2a +ATAGGTTTGAAGAATGCTTGGGTACAGATGTGTAGGAATGCTAGGTGTGGTTGGTTTATTCCTAGCGTCA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_12285_12789_0:1:0_1:1:0_5 TTCATTTTAGCTATAGTTTGATTTTCCCTAAACATAAACTCATGAGAACTTCAACATATTATATTCTCCA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_11933_12373_1:1:0_2:1:0_26 -ATTAGATTGTCGTTGTTGTTGGAGAATATAATAAGTTGAAGTTCTCATGAGTTTAAGTTTAGGGAAAATC +@chrM_12294_12826_1:2:0_2:2:0_6 +ATTTTTCCTATTTTTCGGATGTTTTGTTCGTCTGCCAGGCTATGAATGATTGAGCCAGAGCATATAAAGA + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_12318_12829_1:2:0_4:2:0_7b @@ -594,42 +634,6 @@ AAAATCAGCACAATTTGGCCTCCACCCATGACTACCATCAGGAATAGAACGCCCTACACCAGTTTCAGCA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12076_12570_1:1:0_2:1:0_1b -TCGTTGTTAAAATACAGTTATTATTAGTCGTGAGGGGGTGGAATCGGACCAGTAGGAAAATTGCTGCAAC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12121_12586_3:0:1_1:1:0_3b -GCTCCGAGTCAAAGTATAGTTGTTAAAATACAGTTATTATTAGTCGTGAGGGGGTGGAATCGGACCAGTA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12078_12606_4:1:0_0:1:0_24 -CTGTAAATAATGTGGTTAGGGCTCCGAGGCAAAGTATAGTTGTTAAAATACAGTTATTATTAGTCGTGAG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12133_12629_1:1:1_3:0:0_40 -GTTTTGGGTTAGAGCACCCATAGCTGTAAATAATGTGGTTAGGGCTCCGAGGCAAAGTATAGTTGTTAAA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12131_12680_1:1:1_2:0:0_bc -TATCAGGCCTAGTTGGCTTGATGTAGAGAAGGCAATGATTTTTTTGATGTCGTTTTGGGTGAGATCCCAA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12276_12754_1:1:0_1:1:0_2a -ATAGGTTTGAAGAATGCTTGGGTACAGATGTGTAGGAATGCTAGGTGTGGTTGGTTTATTCCTAGCGTCA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12693_13201_0:0:0_3:3:0_ad -GGAATAAACCAACCACACCTAGCATTCCTACACATCTGTACCCACGCATTCTTCAAAGCTATACTCTTTA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12294_12826_1:2:0_2:2:0_6 -ATTTTTCCTATTTTTCGGATGTTTTGTTCGTCTGCCAGGCTATGAATGATTGAGCCAGAGCATATAAAGA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_12843_13287_1:1:0_2:2:0_6c -TTCACATCATCATGCCTAGTAATCGGAAGCCTCGCCCTCTCCGGAATACCATTCCTAACAGGGTTCTACT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_12475_12979_2:0:0_0:0:0_51 AGTGTAATTAGTAGGGCTCAGGCGTTGGTGTTGCAGGTATTAATTGCTTCAATAATTAGGTCTTTTGAGT + @@ -638,26 +642,30 @@ TGGGTTTATGAGGTCTGGGTCATTTTCGTTAATGGAGATTAGGGGGGAAAAACGCGGTTTTGTTCTTTTT + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_12693_13201_0:0:0_3:3:0_ad +GGAATAAACCAACCACACCTAGCATTCCTACACATCTGTACCCACGCATTCTTCAAAGCTATACTCTTTA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_12843_13287_1:1:0_2:2:0_6c +TTCACATCATCATGCCTAGTAATCGGAAGCCTCGCCCTCTCCGGAATACCATTCCTAACAGGGTTCTACT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_12931_13388_1:0:0_1:0:0_74 GGATGTTTTTAGGCTTAGGTTGAGAGCTTTTATGGGTGTAATGCGGTGAATAATAGATGGGAAAAACCCC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_13353_13784_0:0:0_1:2:0_33 -CCCATAAAATCTCTCAACCTAAGCCTAAAAACATCCCTAACTCTCCTAGACTTGATCTGGTTAGAAAAAA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_12958_13479_0:0:0_1:2:0_5c GGTTGGTTGTTAAAGTGGTAATGTTTGTGTGAAGAGTTGAGGTTGATCTTGGGATGGTTTTTTCTAACCA + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_13075_13601_1:0:0_2:2:0_59 +GATCTTTGATTGCGGGTATTTCTATTATTATCGAGATTACTCGCGATTAATTGAGTATAAGATAATAGTT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_13151_13595_2:2:0_1:2:0_87 TGTTTGCGGGTATTTCTATAATTATCGAGATTACTCGAGATTAATTGAGTATAAGATAATAGTTAAGATG + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_13075_13601_1:0:0_2:2:0_59 -GATCTTTGATTGCGGGTATTTCTATTATTATCGAGATTACTCGCGATTAATTGAGTATAAGATAATAGTT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_13193_13631_2:3:1_0:0:0_82 GTGCTACTTGAATGATGGTAGTAGCTGGGTGATCTTTGTTTGCGGGTATTTTTATTATTATCGAGATTAC + @@ -666,6 +674,10 @@ CCAGAGACTTGGGGATCTAACTGATTAATATTGGGTTTTTTAGTATTGGGGGTGATTATAGAGGTTTTTT + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_13353_13784_0:0:0_1:2:0_33 +CCCATAAAATCTCTCAACCTAAGCCTAAAAACATCCCTAACTCTCCTAGACTTGATCTGGTTAGAAAAAA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_13356_13863_1:0:0_2:0:0_1c ACGAGTGCTATAGCTACTGAGGAATATCCAGAGACTTGGGGATCTAACTGATTAATTTTGGGTTTTTAAG + @@ -674,16 +686,32 @@ TGTGTTTGGATATACGCCTGCTATAGCTACTGAGGAATATCCAGAGACTTGGGGCTCTAACTGATTAATT + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_13663_14160_0:0:0_2:1:0_6a +TTCGTATGTTTGTCATTAGGTGTATCTGTAGTTGAATTACAACGATGTTTTATCATGTCATTGGTCGCAG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_13815_14395_0:0:0_0:1:0_9e AGTTAGATCCCCAAGTCTCTGGATATTCCTCAGTAGCTATAGCAGTCGTATATCCAAACACAACCAACAT + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_13826_14258_1:0:0_0:0:0_c5 +TCCTAGAAGGGACCCAAAGTTTCATCATGATGAAATGTTGGATGGGGCAGGTAGGTCAATGAATGAGTGG ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_13921_14471_0:0:1_0:0:0_36 +AAATGTATATGATCCATAATATAAGCCTCGTCCGACATGAAGGAATAAGCAAATAAAAAATATTGAGGCT ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_14039_14391_3:0:0_3:0:0_4b AATGAACTTAAAACAAAAATATAATTATTCATTATTTCTACACAGCAAACAACTGCGACCACTGACATGA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_13663_14160_0:0:0_2:1:0_6a -TTCGTATGTTTGTCATTAGGTGTATCTGTAGTTGAATTACAACGATGTTTTATCATGTCATTGGTCGCAG +@chrM_14070_14563_1:1:0_0:1:0_bd +AATGATATTTGTCCTCATGGAAGGACGTAGCCTATAAATGCTGTGGATATGACTGCGAACAGTAGAAGTA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_14107_14610_1:2:0_0:2:0_8c +TATATGGGATGGCTGATAGGAGGTTTGTAATAACTATGGTACCTCAGAATGATATTTGTCCTCATGGAAG + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_14125_14614_1:0:0_1:2:0_19 @@ -694,16 +722,12 @@ CCCATTATTTAAAATTATTAACGACTCATTCATTGACCTACCTGCCCCATCCCACATTTCATCATGATGA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_13826_14258_1:0:0_0:0:0_c5 -TCCTAGAAGGGACCCAAAGTTTCATCATGATGAAATGTTGGATGGGGCAGGTAGGTCAATGAATGAGTGG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_14379_14856_2:1:0_0:2:0_41 ATCCGATTTATACACGCAAACGGAGCCTCAATAATTTTTATTTGCTTATTCCTTCATGTCGTACGAGGCT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_13921_14471_0:0:1_0:0:0_36 -AAATGTATATGATCCATAATATAAGCCTCGTCCGACATGAAGGAATAAGCAAATAAAAAATATTGAGGCT +@chrM_14458_14976_1:3:0_3:1:0_61 +ATGCAAATAGGACATATTATTCGGGTTTAATATGGGGTGGGTAGTTTAGTGGATTAGCTGGTATGTAGTT + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_14464_14944_1:1:0_0:1:0_b7 @@ -714,26 +738,6 @@ TAGAAACCTGAAAAATTGGACTACTTCTACTGTTCGCAGTCATATCCACAGCATTTATAGGCTACGTGCT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14070_14563_1:1:0_0:1:0_bd -AATGATATTTGTCCTCATGGAAGGACGTAGCCTATAAATGCTGTGGATATGACTGCGAACAGTAGAAGTA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14107_14610_1:2:0_0:2:0_8c -TATATGGGATGGCTGATAGGAGGTTTGTAATAACTATGGTACCTCAGAATGATATTTGTCCTCATGGAAG -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14698_15195_1:2:0_0:0:0_c6 -TACCATTTATTATCGCGGCCCTAGCAATCGTTCACCTCTTCTTCCTCCACGTAACAGGATCAAACCACCC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14792_15274_1:2:0_4:0:0_94 -TAAAATTCCATGTCACCCCTACTATACAATCAAATATATCCTAGGTATCCTAATCATATTCGTAATTCTC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14458_14976_1:3:0_3:1:0_61 -ATGCAAATAGGACATATTATTCGGGTTTAATATGGGGTGGGTAGTTTAGTGGATTAGCTGGTATGTAGTT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_14592_15040_1:0:0_0:1:0_39 AGGATTGATAAGATTAAGGCTAGGACACCTCCTAGTTTATTGGGGATTGAGCGTAGAATGGCGTATGCAA + @@ -746,22 +750,30 @@ ATTGAGAAGTATGAGATTGAGGCTAGTTGGCCAATGATAATACATGGGTGTTCTACTGGTTGGCCCCCAA + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14851_15357_4:2:0_3:1:0_5d -TCGTAATTCTCATAACCCTAGTATTAATTTTCCCAGACAAACTAGGAGAGCCAGACAACTCGATACCAGC +@chrM_14698_15195_1:2:0_0:0:0_c6 +TACCATTTATTATCGCGGCCCTAGCAATCGTTCACCTCTTCTTCCTCCACGTAACAGGATCAAACCACCC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_14703_15218_4:2:0_3:0:1_a0 +GTATGAGATGAGGCTAGTTGTCCAATGATAATAAAAGGGTGTTCTACTGTTTGGCCCCCAATTCAGGTTA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_14792_15274_1:2:0_4:0:0_94 +TAAAATTCCATGTCACCCCTACTATACAATCAAATATATCCTAGGTATCCTAATCATATTCGTAATTCTC + 2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_14825_15378_0:3:0_2:1:0_7d GGGGAGTAGCTCCTACTTCTTGCTGTCTTGAGCAGAGAAGATCTTCATTTCAGGTTTACAAGACCAGAGT + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_14851_15357_4:2:0_3:1:0_5d +TCGTAATTCTCATAACCCTAGTATTAATTTTCCCAGACAAACTAGGAGAGCCAGACAACTCGATACCAGC ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_15077_15578_4:0:0_2:0:0_10 TTTAAGATAATATTCATGGTATATATATTGATTTATGTTGATGATTATTTTATTACCTTAACCATTGATT + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_15560_16128_1:1:0_1:1:0_38 -CCATGAATATTATCTTAACCACATTAAACTAATGTTATAAGGCCATATCTGTGTTATCTGACATACACCA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_15119_15633_0:0:0_2:1:0_13 TGTATGGTGTATGTCAGATAACACAGAAAAGTCCTTATAACATTAGTTTAATGTGGTTAAGATAATATTC + @@ -778,23 +790,11 @@ GCAGTAAGAACCAGATGTCTGATAAAGTTTCAGTTTAGCTACCCCCAAGTTTAATGGGCCCGGAGCGATC + 2222222222222222222222222222222222222222222222222222222222222222222222 +@chrM_15560_16128_1:1:0_1:1:0_38 +CCATGAATATTATCTTAACCACATTAAACTAATGTTATAAGGCCATATCTGTGTTATCTGACATACACCA ++ +2222222222222222222222222222222222222222222222222222222222222222222222 @chrM_15744_16179_0:1:0_0:2:0_4c GGGCCCATTAAACTTGGGGGTAGCTAAACTGAAACTTTATCAGACATCTGGTTCTTACTTCAGCGCCATC + 2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_4389_4907_2:1:4_2:1:0_43 -TTATAGCTAGGGTGGAAAATATTCGGTTGGGTTTAGTTTTTGTTTGGTGAGTTATTATTTTGGAGTTATT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_4740_5317_2:2:0_2:3:0_46 -TAATAATAGCAACACTCATAGCAATAATAGCTCTACTATACCTATTCGTATATACTCGCCTAATTTATTC -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_8286_8815_1:2:0_4:0:0_4f -ACTAAGAAGCTCACTTGCCCACTTCCTTCCACAAGGAACTCCAAATTCACTAATTCCAATACTTACTATT -+ -2222222222222222222222222222222222222222222222222222222222222222222222 -@chrM_14703_15218_4:2:0_3:0:1_a0 -GTATGAGATGAGGCTAGTTGTCCAATGATAATAAAAGGGTGTTCTACTGTTTGGCCCCCAATTCAGGTTA -+ -2222222222222222222222222222222222222222222222222222222222222222222222 diff -r a0d039fa9771 -r a8d69aee190e test-data/samtools_fastx-out2-3.fastq.gz Binary file test-data/samtools_fastx-out2-3.fastq.gz has changed diff -r a0d039fa9771 -r a8d69aee190e test-data/samtools_fastx-out3-1.fasta.gz Binary file test-data/samtools_fastx-out3-1.fasta.gz has changed diff -r a0d039fa9771 -r a8d69aee190e test-data/samtools_fastx-out3-2.fasta --- a/test-data/samtools_fastx-out3-2.fasta Mon Mar 12 12:53:10 2018 -0400 +++ b/test-data/samtools_fastx-out3-2.fasta Fri Sep 28 04:39:19 2018 -0400 @@ -1,13 +1,13 @@ ->chrI_25874_26397_2:0:0_7:1:0_2 -ACCAATGGTTTGCGAACTGATGATAGCATCATTGTCATCAGAACACCAACAACAGCCCCTACTGCCATGACTACAACTCAGCCATGGAACGACACTTTTACCTCTACATCCACTGAAATGACCACCGTCACCGGTTCGAACGGTTTGCCAACTGATGAAACCATCATTGACATCAGAACACCAACAACAGCCACTACAGC ->chrI_93599_94144_3:1:0_9:0:0_1 -CATCCAATGGTCCTGGATCTTAAGTCCCATAGCTCTTTAACGATCTTGTCCAAATTTGCAATGTTTTTAACAAGGTCATTTTCATCTTTCAGAACCTCATCTTTCAAACTGTGGTTTAGTAAAGCTTCTGTCAGCTGTAACTGGAATCCGATATGAGGCTGATAGTAGTCTAATTCATGTGAATTTAGCGAAAGATTGGC ->chrI_139586_140147_6:0:0_3:0:0_3 -TGAAAACCAACCAGGTGTGTTGATTCAAGTCTTTGAAGGTGAAAGATCCAAGACTAAGGACAACAACTTGTTGGGTAAGTTCGAATTGAGTGGTATTCCACCAGCTCCAAGAGGTGTCCCACAAATTGAAGTCACTTTCGATGTCGACTCTAACGGTATTTTGAATGTTTCCGCCGTCGAAAAGGGTACTGGTAAGTCTA ->chrI_176449_177020_5:0:1_5:0:0_0 -TAGGCCGTTATTTCCGTAAAGGATGGTATAATAATAAGAAATTTATCATATTAATAATACCTATATCCAAAAATTTATATTTATATACATGCGCCTAACTATTCATACTATTAATTTCATATTATTAAGCTTTTTTTTTTTCATTTATCATTTTTTTTCGTAACCCTCTCCTACCTGTACAGGTTTCATTCGTAAAGCAG ->chrII_464058_464495_1:0:0_2:0:0_1 -TTGTTGTTGTTGTTGTTGCTGTTGTTGTTGTTGTTGTTGTGCCTGCGCCTGTGCTTGTGCTTGTGCCTGTGCTTGTGCTTGTGCTTGCGCTTGTGCATGTGCTTGTGCTTGTGCTTGTGCCTGTGCTTGCGCCTGTGCTTGTGCTTGTGCTTGCGCTTGTGCTTGTGCTTGTGCTTGAGCTTGTGCTTGTGCTTGAGGTT +>chrIII_58852_59360_5:0:0_4:0:0_4 +TCCAATTCCTTAGAAAACGCGGTCTTTCTCAACTGTACATAGTAATCTATCTGGTCCAGCCAATTGCACTTAGCACGGTCCCAGGGCGTATTCACTTGGGTCCTGGCATCCAGAAACGCCTCCACACAGCCCTCGATCTTGCCGCTTCCTGTACGGTCCTTCACTAATCCTCTGACAGAGATCGTCCCATTACTTAGTTT +>chrIII_65894_66394_3:0:0_8:0:0_1 +ATTATTTTCGTTAGTGTTCGGTTTCCAAGTTAGAAATAATCTACTGGAAAACCTTTGGGATCAACCCAAGCTTACTCATTCTGATTTTCACAGCGTTTCTGTGACCGTCTAGACCCTCCTTCTTGGCAACGCACATAACAGCTCTACCGATGTTTTCTAAACCTTCAGGTGTAATGTTTTGGGCAGTGATCAACTTTTGG +>chrIII_80246_80792_1:0:0_3:0:0_0 +TTTTCTCTTTTCGCCAATTCAAATTTCTCAGGCTCAAATATTTCATCAATCAGTGTAGCGACGTTGGAACTTGTTCTCTTTGCATCCTTTTCAATGTACTCCCAATCATCATCATCTATTAGGTTAGTAACGTTTGATAATGATTTTGATGTTAGTGAGGTTCTTTTTGTATTAGGCATATAAGATAATCTTTTGCTTGA +>chrIII_209470_209900_3:0:0_9:0:0_2 +GGGTTCTGTGGCCAGCCATCTCCTGAATATCAGAAAAATAGTGCGTGTATAAAATCTACGTATACTAACTCTGGGTAAAGTAAACCTTTTTGTACTGTATTCTTTTTTTTTTTTTTGGTTTCCCGTCGTGATGACGTACGTGTATAGAGAATTGAAGCGAAAATAAAAAAAACGACAGAAAATATAGTTCTCCTTGGCTT +>chrIII_238949_239533_6:0:0_6:0:0_3 +GTCACATATTCTTTGCTTCAATTGCTCTCTAGGAAACTGACACACTCGTAGATTGGAAGACCGAAGAAAATAGATAGACTTTCGAATAAGTTCAGCAACAACCTGTGGATGAAATCCTTGCTGCTCTGCCTGTACTCCTTAGTACTCTGCCAAGTCCACGCTGCACCTTCATCATGGAAGCAGATTACCTCCAAGGATGA >chrII_128532_129141_1:0:0_5:0:0_c ATGACTTGTTCCGTGTGGATTTCCAAACTTGATGTGGGCTGGGCATTATAGGGAGTTTGAAGGGTCTTCACTGTTGCTGATGGAATTTCTCTGGTATCTTCAAACTCATCATCGTCTGAAGAGGATGAATCGCTTTCGTCAATATGCAATTCCTGAATTGGTGGAAACTCTTCATATATTGTCTTTGCTTTTGGTTGAGC >chrII_178741_179333_0:0:0_5:0:0_7 @@ -18,6 +18,8 @@ GCAGATCGTTTTCCGTCTGGCTTGAAATGTTCTAGTCTCCTTTTTTTCTTGGCTTCGGGAAAATACGATTTGTTTGTTAATCTATATGCAGAGCCGCTGCTCTGCATGGATTTATGATCTCGAGTGCCATTGAACTTGAAGCATCTTATGTTGAAAGGATTTGTATGCCATCATACCCGAACTTTTTTAGCACGTGAAAA >chrII_462520_463118_3:0:0_3:0:0_b ACTGAAGCATCTGCACCTTCTACTGAAGAGGCGGAGCCAGCCGCTTCCAGAGATGCTGCAAAACAACAAGATGAAACCGCTGCTACAACGATAACTGTAATCAAACCTACTTTGGAAACAATGGAAACAGTGAAAGATGAGGCCAAAATGCGTGAGGAAGAGCAAACATCTCAAGAAAAATCCCCACAGGAGAACACACT +>chrII_464058_464495_1:0:0_2:0:0_1 +TTGTTGTTGTTGTTGTTGCTGTTGTTGTTGTTGTTGTTGTGCCTGCGCCTGTGCTTGTGCTTGTGCCTGTGCTTGTGCTTGTGCTTGCGCTTGTGCATGTGCTTGTGCTTGTGCTTGTGCCTGTGCTTGCGCCTGTGCTTGTGCTTGTGCTTGCGCTTGTGCTTGTGCTTGTGCTTGAGCTTGTGCTTGTGCTTGAGGTT >chrII_482749_483235_3:0:0_1:0:0_0 TTATATGACTATGGTCCACCAGGTTGTGCATTCCAAAACAACATCATTGACGGCTGGAGAAAGCATTTTATTTTGGAAGAAGATATGTTGGAAGTTGATTGTACTATGTTAACTCCATATGAGGTTTTGAAGACCTCAGGTCATGTTGACAAATTTTCTGATTGGATGTGTAGAGATTTGAAGACTGGTGAGATTTTCAG >chrII_509290_509702_4:0:0_3:0:0_4 @@ -32,16 +34,6 @@ TACAAACAGCAATATTTGAGGCCTCCAGTATTTAATATTGTCTTGACGTAGGCGAAGCAAATACTTTCTCACTTGATGATATATTAAACTTTGAGACACATCACCCCAAGCCTTCGGTGGTGAAAAATAATGAAAGAATAAAAATAGCAAAATCATAGCCAAAAACAAGACAGACGCTGAGATGCCATCAACTATTAACA >chrII_798295_798806_6:1:0_5:1:0_a AATGTTGTTCTTGATAGTACCCGAAACTCTTGCGGCTGCCAAGACAGCACCCAAGAACTCACAGAGACCCGGCAAAACCATGGCTTGCCAGTATTTTAGAGATCTAGAAGAGATCGACGACGCGAATGAGTTCGCCACGTCGATTGCCCCGATGTTAAAGGCCTCCAAAAAAGCAAATGACATGGCAATGGCAAAAATAT ->chrIII_58852_59360_5:0:0_4:0:0_4 -TCCAATTCCTTAGAAAACGCGGTCTTTCTCAACTGTACATAGTAATCTATCTGGTCCAGCCAATTGCACTTAGCACGGTCCCAGGGCGTATTCACTTGGGTCCTGGCATCCAGAAACGCCTCCACACAGCCCTCGATCTTGCCGCTTCCTGTACGGTCCTTCACTAATCCTCTGACAGAGATCGTCCCATTACTTAGTTT ->chrIII_65894_66394_3:0:0_8:0:0_1 -ATTATTTTCGTTAGTGTTCGGTTTCCAAGTTAGAAATAATCTACTGGAAAACCTTTGGGATCAACCCAAGCTTACTCATTCTGATTTTCACAGCGTTTCTGTGACCGTCTAGACCCTCCTTCTTGGCAACGCACATAACAGCTCTACCGATGTTTTCTAAACCTTCAGGTGTAATGTTTTGGGCAGTGATCAACTTTTGG ->chrIII_80246_80792_1:0:0_3:0:0_0 -TTTTCTCTTTTCGCCAATTCAAATTTCTCAGGCTCAAATATTTCATCAATCAGTGTAGCGACGTTGGAACTTGTTCTCTTTGCATCCTTTTCAATGTACTCCCAATCATCATCATCTATTAGGTTAGTAACGTTTGATAATGATTTTGATGTTAGTGAGGTTCTTTTTGTATTAGGCATATAAGATAATCTTTTGCTTGA ->chrIII_209470_209900_3:0:0_9:0:0_2 -GGGTTCTGTGGCCAGCCATCTCCTGAATATCAGAAAAATAGTGCGTGTATAAAATCTACGTATACTAACTCTGGGTAAAGTAAACCTTTTTGTACTGTATTCTTTTTTTTTTTTTTGGTTTCCCGTCGTGATGACGTACGTGTATAGAGAATTGAAGCGAAAATAAAAAAAACGACAGAAAATATAGTTCTCCTTGGCTT ->chrIII_238949_239533_6:0:0_6:0:0_3 -GTCACATATTCTTTGCTTCAATTGCTCTCTAGGAAACTGACACACTCGTAGATTGGAAGACCGAAGAAAATAGATAGACTTTCGAATAAGTTCAGCAACAACCTGTGGATGAAATCCTTGCTGCTCTGCCTGTACTCCTTAGTACTCTGCCAAGTCCACGCTGCACCTTCATCATGGAAGCAGATTACCTCCAAGGATGA >chrIV_125433_125964_0:0:0_4:0:0_10 ATTAATATTCTGTCCTGTGTCACAAAATATTGTAATAATTTGGTGCGGTGTATGGGTTCAAGTTCCCAAAAAAACAACTAATTTGCGACACTTCGTAGTTCTGTGCTTTTATATGGAATATACTTGTGGACTCTATTCCTGGATGTAGATTTGCTTACAGATAGCCAAGAAATATTAGAAAAATATGCAGTGTAACACAA >chrIV_144073_144624_1:0:0_7:0:0_b @@ -56,8 +48,6 @@ AGAACAGAAGACGATAGAGATATTTCTGGTAAAGATGTAAACTAAGTTATAAATACGATATGCGTAATTGTGTAAATAACAATAACTATAATTAAATTGAATAATTAAAAGTCTACGTTATTCGTTAAATCAATTGTTTATCTAGTTACGAATGTCTAAAGTTTTTGTAGGACACTTGCACAAATCACTTCCATTATTAT >chrIV_249898_250451_2:0:0_3:0:0_8 TGCTCAAATTCCCTAGGCGGTATATGTGTGTATATCATTTCTAATGGTGCCATCAAAAAGTAGCTATTTTCTGCTTTCTTGATCTTTCTGTTATTTACAAATTCATGAATTGGGTTGGTTACATTTCCAAAAATAAGGTCAATAAATCTCCATTCTTTGTTAACCAGTATTCTCAACCAGCAGTGGTTATACTTCAACTC ->chrIV_876300_876846_11:0:0_4:0:0_0 -ATGGTTTGAAACAAAGTGGTGCAAACTTGTATGAAACCATTAAATCATATTTCATAAATTGTTGCGACATGCAAGACGTTCGCGTATGTTCATGCGTATTTAAGAATCGTCAAGTAACAATTTGCTAATTCGTTGACGACCTGATTTTATTTAGCAAAGACTTCAATGCACATAAGAAAATGATAACAACACTCAAGAAA >chrIV_559435_559935_6:1:0_2:0:0_18 GTCTTCTTTAACTCGGTCTTCTCAAAATTTTTTGCCTTTTCTTGCATCCATTTTTTGAAGCTCTTGGTAGAATCGTTGCATGTGAGATGTATGAATATTAGGTTTTTCGTTTGCTGATTAACTGATGACGAATTCAGTAAGTTGTCGGCATGATATTGAAATAGAGCACGAATTTGCAGTGCATATTTTTTGTTTGCTTT >chrIV_563824_564394_8:0:0_2:0:0_5 @@ -66,14 +56,16 @@ TTCCCAGCTTTTTCGATTGTTGTCTGCCCTTGTTAATTGGTGACCGAACAAACCATATTTGATTCCTTCCTTCTTTAGTATATGACAGCCCAGCAGAAGGTGGGCCATTTTTCAATTTTTGCTGAATATGAAATAGTTTCAGGCACGCATGTTCGTTCAATGCTAATGGTAATAGGAGTTTGTGCTGATACGTTTTTGGT >chrIV_643692_644219_1:0:0_2:0:0_3 CTGGACCTTCTTTGACGGTGTGCCAGAAGGTACCTGTTTTGAGAAAAAAGATAACAAACTCGATTGCTTCATTTTCTTTTGAGAAGATGTGGAGCCATTTTCGAAGTGTGCAGTCTTAGAAGTTTTAGGGGTAGCTGGGGCCATTTTGGAGTTCAAATTGGCTTTGTCAAAATTCACTAGTTGCTCCAATTAAAAAATCT ->chrIV_882753_883176_3:0:0_5:0:0_9 -AATTCTTTCCAAAAGTATTGAAAAAATGCAATCTGATACGCAAGAGTCAAACGACATTGTGACCCTGGCAAATTTGCAATCTAATGGCAGTACACCTGCAGATGCATTTGAAACAAACGTCACAAACATTATCGACAGACTGAACAATAATGGCATTCATATCAATAAGAAGGTCGCATGCCAATTAATTATGAGAGGTC >chrIV_841170_841687_3:0:0_4:0:0_f TGTCCTCTTGTTGGTAGCGAATTATATTCCGTGGAGGTCAAAAAAACAGAAACCCTAATGGAAAATTTTAGAAGAGCAATTGTGTTAAGAATCAAAGAAACTAAGGAATTTTAAGAGGGTGAAGTGACAGAACTAACCCCTGAAGACGCAGAGAATCCGTTGGGCGGATATGGTAAAACTATCTCACATGAAATTGTCGG >chrIV_847233_847818_5:0:0_6:0:0_d AGAGATCAAAGAAATTTTGGTAGGAATCAGAGAAACAACAAGAGTAACATTTATAGAAACTCCCGTTTCAATTCTCGCCCAAGGACAAGGTCTAGAGAAGACTATGATGAAGTGCACTTTGATAAGACCACTTTTTCCAAACTAATTCACGTGCCAAAAGAAGATAATAGTAAAGAAGTAACGCTGGACACTTTACTGGA >chrIV_870726_871233_6:0:0_1:0:0_e AATTCTCAGGCCACGTCAGGCTTGCATAAGCCACGCTAGCTAATAATTCAGCGAGACCCTATTCCAAACCTAATTGTTCGGAACGATGCCATATCTCTTCCGCAGTGTGTGTCTAAGCGGCTTTAAGAGGATACGAAATGTCAAAACACGAGAAAATTCGATTATATCAGTACGAACTTTTCTTTGCGCTTACTGCCTGA +>chrIV_876300_876846_11:0:0_4:0:0_0 +ATGGTTTGAAACAAAGTGGTGCAAACTTGTATGAAACCATTAAATCATATTTCATAAATTGTTGCGACATGCAAGACGTTCGCGTATGTTCATGCGTATTTAAGAATCGTCAAGTAACAATTTGCTAATTCGTTGACGACCTGATTTTATTTAGCAAAGACTTCAATGCACATAAGAAAATGATAACAACACTCAAGAAA +>chrIV_882753_883176_3:0:0_5:0:0_9 +AATTCTTTCCAAAAGTATTGAAAAAATGCAATCTGATACGCAAGAGTCAAACGACATTGTGACCCTGGCAAATTTGCAATCTAATGGCAGTACACCTGCAGATGCATTTGAAACAAACGTCACAAACATTATCGACAGACTGAACAATAATGGCATTCATATCAATAAGAAGGTCGCATGCCAATTAATTATGAGAGGTC >chrIV_946167_946637_1:0:0_2:0:0_4 ATATTATTAGCTATTATTATATCATGAGCAATTCTCGCGCGCGGCATTTGAGATAGCAAACTTAATCCGTCACACAGATAATACAACAAATTATGACACATAATACTCCCGGTACTCAATAATATCTCATTGTTCGGTCACGAATGTGTCATTGACTATCCAATAGAGAATCAAATACAACGACTACTGGGAACTTATCT >chrIV_1060041_1060548_1:0:0_3:0:0_1 @@ -106,38 +98,34 @@ GCATTCCGCTGGTAAGTCATTCGAAGTGTCACTTCCAGGGGTGTTGGGCCTTGACTTCGATTTTGCTCAAATTTCAATGAACTGATGGCCAGGCTCGTGAAACCATTCAAGAACCTGGTAGTCAGTGTTATAGGTATAATGACCTGATGATGAACGAATTGACAACCGGCTAGGTGTAAAATGGTGCCGTGGTATAAAAA >chrIX_405615_406160_6:0:0_3:0:0_6 TAGTTTGAGATGACACAACTTTTAATGATCTACAATATATCCATCTGGGTCTCCACGGCTGCAATTTTGAAATTTTCTTAGCGCTAAAAAAAAGAAATCTAACTGAAAAAAAAAATTATACCTCAGCTCATCGAATGCATCTAATACAGGTATAACGCAGAGAAAGCAGTACAAGCAGCAAGAAATTACCGGGACGATGG +>chrI_25874_26397_2:0:0_7:1:0_2 +ACCAATGGTTTGCGAACTGATGATAGCATCATTGTCATCAGAACACCAACAACAGCCCCTACTGCCATGACTACAACTCAGCCATGGAACGACACTTTTACCTCTACATCCACTGAAATGACCACCGTCACCGGTTCGAACGGTTTGCCAACTGATGAAACCATCATTGACATCAGAACACCAACAACAGCCACTACAGC +>chrI_93599_94144_3:1:0_9:0:0_1 +CATCCAATGGTCCTGGATCTTAAGTCCCATAGCTCTTTAACGATCTTGTCCAAATTTGCAATGTTTTTAACAAGGTCATTTTCATCTTTCAGAACCTCATCTTTCAAACTGTGGTTTAGTAAAGCTTCTGTCAGCTGTAACTGGAATCCGATATGAGGCTGATAGTAGTCTAATTCATGTGAATTTAGCGAAAGATTGGC +>chrI_139586_140147_6:0:0_3:0:0_3 +TGAAAACCAACCAGGTGTGTTGATTCAAGTCTTTGAAGGTGAAAGATCCAAGACTAAGGACAACAACTTGTTGGGTAAGTTCGAATTGAGTGGTATTCCACCAGCTCCAAGAGGTGTCCCACAAATTGAAGTCACTTTCGATGTCGACTCTAACGGTATTTTGAATGTTTCCGCCGTCGAAAAGGGTACTGGTAAGTCTA +>chrI_176449_177020_5:0:1_5:0:0_0 +TAGGCCGTTATTTCCGTAAAGGATGGTATAATAATAAGAAATTTATCATATTAATAATACCTATATCCAAAAATTTATATTTATATACATGCGCCTAACTATTCATACTATTAATTTCATATTATTAAGCTTTTTTTTTTTCATTTATCATTTTTTTTCGTAACCCTCTCCTACCTGTACAGGTTTCATTCGTAAAGCAG >chrM_7124_7740_3:0:0_7:0:0_0 TTAATTTTCTTATTCTTAATAATATATTTTAATAGTCCTGACTAATATTTGTGCCAGCAGTCGCGGTAACACAAAGAGGGCGAGCGTTAATCCTAATGGTTTAAAGGATCCGTAGAATGAATTATATATTATAATTTAGAGTTAATAAAATATAATTAAAGAATTATAATAGTAAAGATGAAATAATAATAATAATTATA ->chrV_573344_573800_1:0:0_1:0:0_1 -TGCTAGCAAGATCATCGTAGATCCCCACGTATAAATCAGTAACGCCATCGCAACCTTCTTCAATAAAGTTTCTTACAGGGGCCACATTCAATCAACCGCATCGGCTCAACCTGATCATGCAATTAGCAAGCAACACTGTGTACGGTACAAACAGAAACGACACATATTTCACGTCGCCCTTAGACGCCAGTGCTATCAAG ->chrXII_1065644_1066121_6:0:0_4:0:0_5 -TTTGATTAGGCCAGACTTTTCGTCTTCGTAGAATGACCGCACTTGCGTGGGGATCGATTCAAATAAAGTTATTGAGGGACAATGTACGAAGTCGTTTTTGTTATTTAGCGCCGACTCAAACTCGTCAAAGTTTGCTTTTTCAAACTTACGCCTATCGGAAACTTTCAATTTATTTTTGTAAGTTTCGAAATTAACAATAG ->chrV_124419_124957_4:0:0_4:0:0_5 -TAAAAGAAATGGTTGATGTGCCTATCGGCCTTATGGGCACACATGGATACAACTTTAACAACTGTAGTGATATGGCATGTATATTCATTGGAATGGGTCCGATGTTCAACAATGAAGTCGTACCTCCATTTGAAAACATCGAAGTATACAATATGCTGCTCAAGGCAAGTGCGCTTTTGGGAGAAGAAAAGACAAAGAAG ->chrV_151218_151704_3:0:0_8:0:0_2 -TCATGCGCTTGTGATTATCGTATAGTGTATATATATAATATATATAGATAGCGATAAATGGCAAGATCCTCTATGATAAAAGTCAACATAATGAAAACAGATGGCGCTTGTCTACTGTTTGCAAGGCTTGAAATCACAGGTTTTTATTATATCGTGGATTTTTGCCATTGCCTAACTCAAAAATAATGATCGATTTTTTG ->chrV_234738_235208_3:0:0_5:0:0_3 -TTCTCTCAAAGTTATCACTTTGGGATTATAGGATACTTGTAAAACCTCCGCAAAATCTGTGTCACCACCACAAACTCTCTAATAAGAGACACTATAGGGGCTATCCTTTTTAGACACTTCTCCATTAGCGTAACCTACTTTACAATCCACTATCCGTTCATTCAAATACTTCCTATACATATGTTCTGTACCCCAAAAAC ->chrV_278567_279041_6:0:0_2:0:0_6 -ATGTCCAGTGGCTTGCTTTTGGATCTTCCTGGTAAGCGTGCTGAGGCTACTGCCAGACACTCTGCTTTATCGCCTAGTAAAGTTTATGTAGCATGTGCATTGACGTAGTCAAGATCATTTGGTTCTAATCTAGCCATTTTTAGAGCCATCTCTATTTCTCTTTTGGCACCATTTCCATCAGCAGGAGGGGAGGTAATATG ->chrV_436297_436806_7:0:0_5:0:0_7 -TATTGGTGAAGATTGAACATTCATTTTCTTATGCTTATATAATAGAGGAATGAACACACGCATATAGGATCATTATATAGTTATGGCTCGTATTATCATGGCTCTGGTCATTTCATACATTTGATGTCGTCACGACTCATATTATTTGCTCATATAAATAACTTCCTCAAATATATAAGTTCCTCATCAAGTTCAATTAA ->chrXII_219746_220211_0:0:0_2:0:0_f -AAATATGTCAGACCACCACCAATGTTAACCTCACCTAATGATTTTCCAAATTGGGTTAAAACATACAACAAATTTTTACAAAACTCGCATCTCGGTGGTATTATTCCGACAGTAAACGGAAAACCCGTACGTCAGATCACTGATGATGAACTCACCTTCTTGTATAACACTTTTCAAATATTTGCTCCCTCTCAATTCCT ->chrV_479347_479873_3:0:0_3:0:0_4 -ATGGATGTGTTTCATATATCAGATGAGTTCGTATTTAAATCGGTATACGATAATGATGGTAAATCCCGTCCTGCTAGTATGGTCATATAACCACCAAAGAGATTCTCACAACACTCTTCCATGCTTATTAATAATCCAGCTACTCCAAACCAAAAGATGAGAGATTCCTTGGATACCACTGGAAGACTAAGTAAGACATT ->chrV_482784_483296_3:1:0_7:0:0_0 -TCCCTTATCTATTTAAACATATTTAACAATACCACTATTTATTCTGTATAGTAAGTAAATCTTTAATGCAAGCAAAAATCTTCCCTCCGCGAATCCTGAAACATATTCCCCTCGGTGAAACACGCTCTTGCAAATGACCTGAGAACACAAGATATCAGACGGCTCTTGTTGCACAAAAAACAAAAACAACAGAATCAAGC ->chrV_498912_499362_2:1:0_5:0:0_8 -TTGTAAGGAAACGGGTTGTGGAAAAAAAAAAATACAACTACGTTGCCGCGAATCTTGTTGAAAAAGGTCTGAAATTAAGGCAAAAATGATACTGGAATTGTTAGTCTAGTATAATCGATCAACTGCAACAACCAAGTCTTTAAATTTTCAGTCCCTCTTGAAAGAATAGTGAAGGTTCATTTTTATTTTTACATAGTAAA ->chrVI_18396_18897_3:0:0_4:0:0_0 -GCACTCATCCAAGGATGGCGCTATTTCGTACCTTTTGATGCGGGCAATTTTGTTGATGCTTATAACCTTCTGCCTGTTGGAATTTTATTGTCTATTGGCATATGTGTTTTTAAGAGCAATCATTTTAGAACTGTTGATTTGCGGTCAATCAACCTAGACGAAGGACGAAGAAAAGACATGGAGGCTGATCTTTCTGATCA ->chrVI_38233_38753_3:0:0_4:0:0_2 -ACGAACGATAGTTTATATTACTACTTCACCAATTGTTTATTTCTTATTGGAGTGTTGCCTACATTATGTTTTACTTCTTTCAATTATTCATAGCTACTTCGTTGCTGAAGTTAGCCAGGTTGTCCGGTTTAGCGGCGACCGGATCCGTCGCCACCACTGGATTAGCATTTGTGTTCTTTACTTCATTGTCCAGCTTAACA ->chrVI_118934_119464_5:0:0_3:0:0_1 -GACTTGAAATTACTTAGTTCTAAGCCAACTAAACGTCCCATTGCGTCTCCTTGTGCCTGCTTTTTATCAATAGCCTCTGGATGCTTGCTTTAAGTGATTTTATGAGATGTGATATTAGCGTCTTCGGTCTTATAGAATCCAATACTCTATTCACTTTACGCGTTATTGATACTTTATTTTTTTTTCGCGTACGTGTTTAT ->chrVI_184780_185293_1:1:0_8:0:0_3 -TTCGAACATTAAAGCTAATGCTAACACTAGTACCAGCGTGAATAAGAAAAATTTGCCGCCAACAACTAGTGGGAGGATACCCTCTAGCACCATCAGGAGATATCCGAGTCGCTATAAGCCTTCTCACTCGCTGCAGCTTCCCATTAAGAACGACTCCAACTTTAAACGATCTAGCATATATGCCTCCAAATCCACTGTTA +>chrVIII_22151_22729_4:0:0_5:0:0_4 +AGTCATGAATTTGCATGGTACAGACGTGTACTTAACTATGAGAGATACGCTGAACAAACTAGTAAAGGAGTTGAGGATGCTGTTCCAAGCTTTATCTATTGAACACTCTTCTCAAGATAAGCAGTTCTTTTCTTTATTCCAGGAGAATAAAGACTCTGCCGTAGTGCCGTTGTAACAGTTCTGCGCACACATCAATGGCT +>chrVIII_133554_134047_5:0:0_5:0:0_5 +GGCAGGAGAAATAATCCTAATAACCTTATGTCGAAATACAGATTCTGAGAATTAGGTTAATTTTGAGATAATTGTTGGGATTCCATTTTTGATAAAGGCTATTATATTAGGTATACACAATATACAATAAGTTCTCCTCGAGGATTTAGGAATCCTCAAAATGGAATCTATATTTCTACAACCTAATATTACGATTATTC +>chrVIII_272363_272823_5:0:0_6:0:0_2 +AATGCTAGAAATGAGGGAAGTGTGGACTTGATATGGCCTGTTGTGGACGCCTGAGAGTTCTTTCACGTGCTGTGTTCGGCCCGCCTATATAGGGACAAATTGTTAAAAAGATAAATAAATATAAACTGCCTCGGAAGGGGTTGGGAACGCCCGGCAGAAGCGATGAGGGTAACGGGACGATAATTAGAAGTGAATGCTGA +>chrVIII_311844_312317_4:0:0_2:2:0_8 +TATGTTTATGTCTAAATTACGCGCATATGAAGAGGCAAATCAAGCCTTTGCAACAGCTGATCAGATAGACTTGAACTTGGCTAAAGCATGGGCCCAATGGGGTTTCTTCAATGACCGTCGTTTGTCAGAAGAGCCAAAGAACATTAGTTTTGCTAGTAATGGAATAAGCTGTTATTTACAAGCCGCCGGCCTGTATAAGA +>chrVIII_342849_343228_3:0:0_3:0:0_1 +TATCGTAGTTTGAACTGGTGTTCACACTAGAAACTTCTAAGTGAGAGTGAAAAATCCCAAAAAATGACGCCAGAGAAGTGTTAGACGGCAAAACCTGCGAGCCTCTGCCTTCATCCTTCGATAGGTTTTCATTTAGTACTTTCATTGCTTGCTTATTTAAATTTCTTTCCAGCATAGGATCAATGGAGGCTCCATCAAAG +>chrVIII_385961_386445_6:1:0_2:0:0_7 +GGTGGCGGCATCAAGGGATTGAGACGGGTTAGTTAAGTAGACCGTACTATAGTAGTCATCATCATCATAAAAAACGTAACAAGTGCCATCCGAGCTGGAGACGGATATCGATTGCGTAGAAGACGATTCTAATGGCATGGATGTCGTTGCTCTAGACGTTGTATCTACGCTAGAAGAGGGTACCAGTGTAGAGGTAGTTC +>chrVIII_455213_455717_8:0:0_5:0:0_3 +CTACAGGCGGCTATTATTGTCGACGTATTCTGTAAAAGCTTACCGCTAACTACAACTTTCGACTCTAATGCCTGCGTAACGCAGAACTTCCCAAAGGGAACGGACCTGGAATACTATGCAGAACTACAGGAACTACTGAATAGCATTCCACGTAGGGTCGGTCATATCGAAGCAGTTGTATGGGATGATAGACTGATCGA +>chrVIII_456483_456967_3:0:0_7:0:0_6 +AATTTTAGAGAAAATGTTTTTTTCAGAAGTCCAGTATAAAAATACTTCCTATGAGCCCTCTCGAAGATATTAAAGACAGGTACATTATGCAGCGGTAGATCGTGCGTGGAACCGAGCCTATTATACTCTCTATATACGAGAAATTAGCCTGAAATTCTTGAAGGAGACCAAGAAAAACCATCTGTCCATCTTTTTATGCC +>chrVIII_495976_496487_3:0:0_4:1:0_0 +GCGCTTTACAATTTTCATATCATGACAGTCAAAACAACGAATTTGAGGTCATGGGAGTAGTTAATAATCAGCTCGTCGGAAAATTCTTATTTAGCCAATATTTATGTGGCGAAAAATCTCCTTCTCCACCAGCCAAAAAAACAGCTATCGACAAATTGAACACACTCCTCTAAACTTTTAGAATTAAGTCTTGTTCATAC >chrVII_48887_49401_7:0:0_6:0:0_6 AATAGCACGGAAGAAAATATCATAAACGGCAAATTATTAAGGTAATATAGCATCCTGGAAGACATTGTTAGTTTCTGGGAGGGTCTGTGCCCACTCATGGGTATCTTGATGTGGCTCATTAGATGGACCATATAGCCTTATGCCTCTCAGATGTGTATCTTTACCGTTTTCATGGTTGACTGGAAACAAAAGCGTGATGA >chrVII_79245_79829_5:0:0_0:0:0_10 @@ -174,102 +162,32 @@ ACCAAGAATTCGCTGGAAGACATCCAACCCTGCGCATTCACCATTATCAAACTCGTCTTTTTTGTCTTTACGTTTTAATTTAGCACCGAGCCCAACGTTGTCGTCCTTAATTGACACTTTGATATGCGAAGTGTTCGAATTCATGGGGGATAACCCGAGACCCATACCGGGTTTCCATCCAAACTTTTCTAGAAATTGGT >chrVII_1066297_1066809_8:0:0_8:1:0_0 GACGTTGAATTGAAGAATAAACTGAGCCACACAATCCCATCTTCTGCACACTTAGTTCCTTATTTAGAGACTTTTATGATAAAAATTTCTTCCGTTCACTGTTAAACAAGCTTGTGAACAATGCAGACTGTGCAGGAAAATGACCTATGTTTGAAGGATGTTGCCACATAATTGAGGGAAGTTAGGAGAGCATTCCCTAC ->chrVIII_22151_22729_4:0:0_5:0:0_4 -AGTCATGAATTTGCATGGTACAGACGTGTACTTAACTATGAGAGATACGCTGAACAAACTAGTAAAGGAGTTGAGGATGCTGTTCCAAGCTTTATCTATTGAACACTCTTCTCAAGATAAGCAGTTCTTTTCTTTATTCCAGGAGAATAAAGACTCTGCCGTAGTGCCGTTGTAACAGTTCTGCGCACACATCAATGGCT ->chrVIII_133554_134047_5:0:0_5:0:0_5 -GGCAGGAGAAATAATCCTAATAACCTTATGTCGAAATACAGATTCTGAGAATTAGGTTAATTTTGAGATAATTGTTGGGATTCCATTTTTGATAAAGGCTATTATATTAGGTATACACAATATACAATAAGTTCTCCTCGAGGATTTAGGAATCCTCAAAATGGAATCTATATTTCTACAACCTAATATTACGATTATTC ->chrVIII_272363_272823_5:0:0_6:0:0_2 -AATGCTAGAAATGAGGGAAGTGTGGACTTGATATGGCCTGTTGTGGACGCCTGAGAGTTCTTTCACGTGCTGTGTTCGGCCCGCCTATATAGGGACAAATTGTTAAAAAGATAAATAAATATAAACTGCCTCGGAAGGGGTTGGGAACGCCCGGCAGAAGCGATGAGGGTAACGGGACGATAATTAGAAGTGAATGCTGA ->chrVIII_311844_312317_4:0:0_2:2:0_8 -TATGTTTATGTCTAAATTACGCGCATATGAAGAGGCAAATCAAGCCTTTGCAACAGCTGATCAGATAGACTTGAACTTGGCTAAAGCATGGGCCCAATGGGGTTTCTTCAATGACCGTCGTTTGTCAGAAGAGCCAAAGAACATTAGTTTTGCTAGTAATGGAATAAGCTGTTATTTACAAGCCGCCGGCCTGTATAAGA ->chrVIII_342849_343228_3:0:0_3:0:0_1 -TATCGTAGTTTGAACTGGTGTTCACACTAGAAACTTCTAAGTGAGAGTGAAAAATCCCAAAAAATGACGCCAGAGAAGTGTTAGACGGCAAAACCTGCGAGCCTCTGCCTTCATCCTTCGATAGGTTTTCATTTAGTACTTTCATTGCTTGCTTATTTAAATTTCTTTCCAGCATAGGATCAATGGAGGCTCCATCAAAG ->chrVIII_385961_386445_6:1:0_2:0:0_7 -GGTGGCGGCATCAAGGGATTGAGACGGGTTAGTTAAGTAGACCGTACTATAGTAGTCATCATCATCATAAAAAACGTAACAAGTGCCATCCGAGCTGGAGACGGATATCGATTGCGTAGAAGACGATTCTAATGGCATGGATGTCGTTGCTCTAGACGTTGTATCTACGCTAGAAGAGGGTACCAGTGTAGAGGTAGTTC ->chrVIII_455213_455717_8:0:0_5:0:0_3 -CTACAGGCGGCTATTATTGTCGACGTATTCTGTAAAAGCTTACCGCTAACTACAACTTTCGACTCTAATGCCTGCGTAACGCAGAACTTCCCAAAGGGAACGGACCTGGAATACTATGCAGAACTACAGGAACTACTGAATAGCATTCCACGTAGGGTCGGTCATATCGAAGCAGTTGTATGGGATGATAGACTGATCGA ->chrVIII_456483_456967_3:0:0_7:0:0_6 -AATTTTAGAGAAAATGTTTTTTTCAGAAGTCCAGTATAAAAATACTTCCTATGAGCCCTCTCGAAGATATTAAAGACAGGTACATTATGCAGCGGTAGATCGTGCGTGGAACCGAGCCTATTATACTCTCTATATACGAGAAATTAGCCTGAAATTCTTGAAGGAGACCAAGAAAAACCATCTGTCCATCTTTTTATGCC ->chrVIII_495976_496487_3:0:0_4:1:0_0 -GCGCTTTACAATTTTCATATCATGACAGTCAAAACAACGAATTTGAGGTCATGGGAGTAGTTAATAATCAGCTCGTCGGAAAATTCTTATTTAGCCAATATTTATGTGGCGAAAAATCTCCTTCTCCACCAGCCAAAAAAACAGCTATCGACAAATTGAACACACTCCTCTAAACTTTTAGAATTAAGTCTTGTTCATAC ->chrX_20624_21148_5:0:0_6:0:0_6 -TCAGCATCGTAATCTGCGGATCTTCTTTCTGGTGGCACCCATGAGGCTTATTTCCATGCTGGCACACCTTCCCGCCACATAGTATTCACCTCCTCCAGCGTCCGGCCTTTTGTTTCTGGTACACAGAAAAAGACATAAAAGTATGCAAAAACCAGACAGCCTAAGAATACATAACCGTAGTAAAAGTTGATTGCCCCGGT ->chrX_32511_32973_6:0:0_10:0:0_7 -GGTGGAGGTGTGGCGTCTCCAACTGAGAAAATATCAAACAAACAATTTTGCGACGACGAAATAAAAGCACTTGTAGATGTCGCAAATAGTTAGCACACATACGTAACAGCACACGCCTACACTGCGGAAGCTATACAAAATTGTATCAAGTTAGGTGTTAATGGTAACGAACACGGAAACTTATTAGATGAACGTACCGC ->chrX_75095_75508_2:0:0_2:0:0_2 -CAATCTACCGTTCAATTGAACAACAATCTTACCAGATCTGTGGTCATCGATGTATTCAAATTCACCAATGTAACCGTGCTTTTGCATAACTTGCAAAAACTTTATAATGACCTTGGAGGATGGTCTGATTAAAACTTGACGCTAACCGGTCTTTTCAGCGTTGTTAATGGCATTCAAAGCATCAGCTAAAACGGAAGATC ->chrX_131958_132464_9:0:0_5:0:0_0 -GTGAGCCCTTAATAATATCAAGAAGCGGCCCGCGCGCCAATGTTGCATCCTCGGATACAAATGTAGACGAAGTGTTTTTTAATCGACATGATGAAGAAGAATCCTGGATACTGGACCCAATACAGGAAAAGTTGGCACATTTGATTCATTGGATAATGAACACTACATCTCGTAAACAAACAATGAAAAACAAAATTCAA ->chrX_185042_185518_4:0:0_1:0:0_b -ATTAACTACTTATATACTTAAATTATATGTTTTTGAAATTTTTAATATGTAAAGCAAATCTGTACGAATAAAGGCTTTTTTCATATTTTATTTGCCTCAATGAAATAAATCGTCTCTTCTCTGGTTCCATAAGGGCATTTTGTTCCTTATTTCTTGCAAACGCTCACGATCCAAATCAGCGAGAATTAGTTGTGGTCCAA ->chrX_204570_205015_2:0:0_10:0:0_3 -GCACAAGCGATAGAGGAGATGTTTAAAGTGTTTAAGCTCACTTTATAGGGTGAAACACATTTTGACGACCGTAAAAGGTCATTTGATTTGGTATTGAGGTCGAGAAAATATTTTCAACTAGTGAAGGATACATTAAACACGCTCACAAAACAACATAAAAATCCGTGATAGTTTAATGGTCAGAATGGGCGCTTGTCGCG ->chrX_358634_359139_4:0:0_4:0:0_9 -ACCTGCTTATACATCAAAGCGAACACCTACAGTATAAACAAGGGTTCCACGAACTATTAAGCGTCATTTATCTGCAATTATATCACGGTACATATCTCGATAATACCGATTAGCAAAACGTTGTGATTATCTTTAACAAGCTAATGAACCAAATCGAACCGATTTTTTATAACGAAGAAAATTTGATTAACTGGGATAAG ->chrX_382849_383384_3:0:0_5:0:0_1 -GCACCAAGAGGTGTACCTCAAATTGAAGTCACATTTGCACTTGACGCTAATGGTATTCTGAAGGTGTCTGCCACAGATAAGGGAACTGGTAAATCCGAATCTATCACCATCACTAACGATAAAGGTAGATTAACCCAAGAAGAGATTGATAGCATGGTTGAATAGGCTGAAAAATTCGCTTCTGAAGACGGTTCTATCAA ->chrX_438844_439314_5:1:0_2:0:0_8 -AGGAAAGTCGTATAATGTCAGAACTCTTTGGAGTATTGAAATGTAATGCTGGCAGAATTATTTTGAAGGACCCCTCCGCCACTTCTAAAGATGTTAAAGGATATATAGCTTCAGTTATCAATACCTGTAAGAAAGGGAGTATTACAAAGAAAGCAGAAGTGGCCGAAATCACTGTTGATGGTTTAGACGCCAATCAAGTT ->chrX_582991_583504_1:0:0_3:0:0_a -TCAACCAATTGAATTACATAAGCTGTCGATTGTCGATAAACACTCCCAAGGACAGCAGCAACAGCCGCATCAAAAACAACATGAAGTGCAGCCTGAATCAAAATCACCAATGGTTACGACACCTTTAAAGCCCAAAAGACTTGCTATACCTATATCAAGTCCGCACAGCTCTACGACAAATCAGTCACCCGTGAGCGACC ->chrX_610495_611012_5:0:0_2:0:0_5 -TTTTCAGCACATTATTACTATTTACGAAAAAAGGGAGTAGGGAAAAATGGCGCGCTTATGGATCCTCAAATAAGGACAAAAAAGTCAAGTAATGAATATCAAATTGAAATGAGTATGCTTACATAGATTTATTTGGTATGTTTTCATTTTGTTTTTGTTTCTTATGTTGCTGCTTTATTTTGTGTAGGTAATAAGGAAGA ->chrX_743509_743937_3:0:0_2:0:0_4 -ACAGCTCGAATCCCAAAAGATTGTTCTACCTCAAGATCTTTTCAGAAGCAGCTTTACCTGGTTTTGTTATGAAATTTACAAGTCCTTAGCGTTTCCGAACTTGATGCTATTATGGCTACCACTTAGCGTCTGGTGGAAACTTTCCAACAATTGTATTTACCCACTTATAGTTTCACTTCTGGTCCTGTTTCTGGGACCAA ->chrXI_27284_27774_3:1:0_7:0:0_3 -AAAGCCTTTGATCAGCTTATCGGTTTTGTTACCAGAATTTCCTCCAGTTCCAAATGTAAAGTTGTTACAGTCACCTTGAGAATCTGCCATGACGTTAAATGTTTTTAAGATTACATCTGTCACTCTTTGGGAAGTTAATACATTGCCTCCGACAACAGCAGCACCGGATCGGGGGCTCAAGAGTGAAGCAGCAGGTATTT ->chrXI_226703_227185_4:0:0_7:0:0_4 -ATCATCGGTCGCAGAAATGAAGAGGTCTAAATTCATAGACGTGTCTCGTATGGAGGATGGTGAGTGGGAGGAAATGCCGTGGCTACCGACAATGTTGTTATTGATAATGCTGTTATTGTTGTGATCGTTATAATTATTATTATCTTGGCCATCATTGTTGTTAGTGGCATCATCGTCTTTTCCATCGTGCTTATTGTTTG ->chrXI_302795_303272_10:0:0_6:0:0_7 -ATCCACTGTTGTGTAACGTTAGTCATATGTTATAATTTGTATTCTCGCAGTAGAGGTAATTCACGATCTTAGGATTTGCGCATGTTTATGATCATAATGTCAAAATAAACTACGTAATGCGTACTTTTAAATCGTTCTTTTGCCCAAAGTAAATGCGCATTATTATAGCATACGTTGATGTTTCCAGTATTCTTGCGATA ->chrXI_314675_315205_3:0:0_6:1:0_0 -ATTTTGGCCACGGTCTGGGAGGGAAAAGATGTGGTTAGACAAGGAAGAACTATTCTTGGTGCTACTAATCCTTTTGGCAGTGCACCAGGTACCATTAGAGGTTATTTCGGTATTGCCCTAGGCAGAAACGTCTGTCACGGCAGTGATTCTGTTGATAGCGCTGAACGTGAAATCAATTTGTGGTTTAAGAAGGAAGAGTT ->chrXI_360709_361124_4:0:0_3:0:0_1 -CGGTGAAGATGTTATATCCAAAGAATTCCATGGTGTCCAAGAAGAAGAAGGAGAAGGTGGCTACAAAATAAATATGCCCAAATTTGAACTTACCGAAGAATATGAAGAGGTCAGCGAATTGATTGAAGAGCTGATAGATACAAGAATAAGCCCAGCCATCTTGGAGGACGGCGGTGATATCGATTACCGTGGGTGGGATC ->chrXI_389403_389898_4:0:0_6:0:0_8 -ATCCATCACCCAATAAAACAACACCAAATAATGTAGATACACACATATCTATTAATTATACATTAGTATCCCCTTGACATACCCCAGTACCGTCTTCATGTGGAAAATTTTCCGTATTTGCTTTCCCCTTCTGTTCCCAAATTCTATAGGGTAAGCGATTCCTGCCTTGTTCGCCACATCTACGAGAACTTAAAGCCGGG ->chrXI_436806_437329_3:0:0_2:0:0_6 -GATGATTTCTGATTAGGAGGAGACGAAGTCCCTTTAATGCTGATTTTCTCTATCTTTTCGCCGTTATCATCTAACCCGGAAAAGTTTCAACAAGACTTTAGCCTTTTAATGGAAACTCCCACTAGTTCAGCTTAAACAAAATAGAAAAGCTTCAACAGAGGAAAGAATAACGCAAAACCACCCTTTTCACTAAGATGCTT ->chrXI_445827_446391_1:0:0_7:0:0_9 -GACTGTAAAGGATTATGATGGCAATGCGTATTACGAAATATCTGGTAAATGGAATGACGTTATGTATTTAAAGGCCTTAAAGCAACCTCGTTCTTCACCAAAAGTTTTCCTTGATACTCATAAAGAGTCACCATTGAGACCAAAAGTTCGGCCATTGAGCGAGCAAGGTGAATATGAATCCAGAAAACTGTGGAAAAAGG ->chrXI_470772_471261_1:0:0_4:0:0_5 -TAATCCTTCAAATGCCACGGATTTCGATTCTGTTTATGCAAGAGTCGGCGATAACTTGAGGGTATCCAACCTCAACGATGCTGTAGAAGAGGATGTCTCCCTAAAGGGTTGGCCTCATAAAGTTTGCGAAAGCTGGATCGAAGATGCTAGAAGAAAATTAGAAGTCCAGCGCCTGGTAGAGATTCTTGACTGTGAAATAA ->chrXI_609225_609808_8:1:0_2:0:0_2 -CTATGAATCAAACCGATAACAGAGGTGTGCTCGACGCAAAACTCGGAAAAGAACAGGAAAAAGAGGAAAGTTCAATCGAATATGAAAGTGAAGGACAGCAGGAGGATGAGAATGAAATTGAAAGCCTAAATTTAGAACCAGATCCTAAACTACAGATGAATCTTTAAAATGACCCACATCAAGATGATTTTCCAGAAGCA ->chrXI_628737_629238_4:0:0_5:1:0_a -TTTTTTTCACTTCTTGCCTCAGATATGTCAATAATACTTTCCAGGGCACCTAATACTGGTATATTGTTGTGTATATTGCCGAAGGGTTCGAGTTTGAAGACTAAACTTCCCAATATATTAGTATTTTGAAATGATGAACGATATATCAACGGAACGGTTCTGATTATTACGGCTATTGGAAAACTTCTTGACAGCTCTCT ->chrXII_14440_14929_3:0:0_4:0:0_0 -TACAAGACTAAGGTTTCTATACCTCAACCAATTGATACTTTATCTGGAATTATGGTCAGTTCGTGGGCAAAAGTCAGCCTTTATGACGTTGAATTCAATCTAGGGCTTGGGAAGCCCAAGAGTGTACGACGTCCGCGCTTCATTTCCCTTGAGAGCCTAATATATTTTATGCCTAGATCCTCCAGAGGTGAAATGGTGGT ->chrXII_79515_79982_3:0:0_9:0:0_e -AAGTTACCTCCTAGGTTCAACAAGGCGGTGATTTAGGTTATTGACGCATTGAGATTTGATTTCGCTATTCCTGTAAACGAATGCCACTCTAATTACAACTTTAACAAACATAATAATATATTATCATTGAATGATTCTTTTGCAAGCGATAAGGATGCATCTTCCCTATTGTAGAAGATCATTGCCGACCCACCAACCAC ->chrXII_179129_179604_4:0:0_3:0:0_c -ATTCAAATCACTTCCTTTGACGGTGGATAAGAGCTTCCAAAGAGAAAACAGTATATTGAGCGAGATTAATAGGTGGAACAAGTAGTCAAGACGTTCTGCATTCACCCAACTGACCGTGGTGTGATATATGATGTTAGCCTTCTTTAACGTGTGAAATGTCAACATGTACAGATGGATTCTGGATAGCCGGTTGCAAAACT ->chrXII_224837_225269_7:1:0_1:0:1_7 -TACTAAGCAAAAATGAATTCTAGTAATTAATAATAATGATATAAAAAAGGCTAAGTGCACAATACTAAAAACGAAACTAAGATCCTTAGAGTGATTTGATATCACCTGCGAAAATACCTTTTTGTCTTTGATCATCCGATTTTACGATCCAGTCTAGGGGACATAAGGCGTTATAGGTCTTCCAAAAGACCTTGCACGGA ->chrXII_329567_330050_4:0:0_5:0:0_3 -GACATGAAGCGACAGAAGCCCTACGGATGTGCGGCTGGAAAAGAAAGTTTCATGAAGAACCAGTTGATATATATTTTACTATATACTTTTGCTGTGTATTTCTATATGAGGCTAGTTGGTTGGTGGGAACTGGAAGTGAAAGTACTGATCTTTAGGGTGCAGCTGTTGGTGTTGCTGTTGCTGTTGCTGTTGCTGCTGTG ->chrXII_343172_343673_10:0:0_4:1:0_9 -ATCATTATTTAATATGTCATCCAACCGTCTCATATTAGGTTACGAATTTGTTACACATTCTGGCCTTGCTAACCTCTCCAGGTCATCTTTGTTGCATCCAGGTACACTCTCTACCAACATTTAACCATTGCCCTCCGGATTCGCACTGTCATATTTATTAGCCTCTTCGCCGCACATGATGTCAATATCGGGTCGATAGC ->chrXII_349489_350011_4:0:0_4:0:0_6 -TTTGACGGAATTTGACAATAGATAACCCTCCAGCCACTAGCTGAGTTAACGTCTTGGAGACCAAGCATAAACTATCAAAAGCGAGTTTAACGCATTTAGATTCGCTCATAGACTTAGAATCATCAAGCGCAATCATTATTTGATACTGACGTTTGCTTGGTTTAGTTCTTCTCAACCAGATTTTATCTATACGGAATTGT ->chrXII_394208_394614_2:0:0_5:0:0_b -GTTGACATTTATTGATGTATCTATTTCTTTGAGGGTTAATTAAAGATAACAAATTGCTTTCTTCCGCTAATTTGAGCCTATTGAATTTACTGGGAAATGCCAACGTGGTCAGACATCAATTCAAGAAGTTAAGTTCTCAGAGAGTGTAACTTGCCTGTTTGGTCGCTGCAGTGAAACTGCCATTAGCTCTTTAGCACAAC ->chrXII_625955_626443_7:0:0_4:0:0_11 -TTTTTTTCATTTTTCATATAAAGAAGAAACACTGATATTATTATTATTCATCCCAAGAACGCTATAGTGTATATTCCTAGCAAGAAAAAAATAAGCAAAAAAATTGTATAATGAGCACTGCAACTACAACAGTTACTACCTCCGCTCAGGCTTCTCATCCTACCAATATATATTGCTCCGGTTTGCAATGTGGTAGAGAA ->chrXII_662505_663100_5:0:0_6:0:0_1 -GAGAGCTACCTCCATAATGTCACTTTTCATTAATGAAATTGACTTATTTTGTATACAGCTAAGGCAATAGGACTTCGCTCGAAGGAAGAGAAAAAAAGAAAAGAAAATGTTTGGATCGCTCAAAACTCCTAGTATATTTTCAGAGGGCCTTCCACATATATTTCAGTTTGTGCCAACGAAAGTTAAAAGAAAAGCAAAAA ->chrXII_804157_804654_4:0:0_5:0:0_2 -ATGGGCGGAGCAGATGATGGAAGTGGTGGTTGTGAAGGAGATTTATGATTTTCGGTTTGAATCTTTGTGGAAGAAACGCCGACGACGGCTCCTGGTTCAGACGTCCTGGCATTAATTTCTGCCAAAAATGGCAACCCGCCTGCAGGAACTTCAGAAGATGGTGGTGAGACTGCGTTATCTGTAGGTTTAATGTTTTTTGA ->chrXII_807598_808081_4:0:0_5:0:0_8 -AGTCGGCCAAGAGTTCAATGTCTTCAAAAAAGTTTAATAACACCACGCAGTTCGGAAGTATTAGTTCTACCAAATTTACTTCGGGATTATCTTTGCTTACTCGAAAGTCATAGAGCGTATTGACTAGTTTTAAGTTTATTTCATTTAGAGTCAACGAACATTTATCAAGGGTGGCACCAGATAATAACTCAGCATAAGGG ->chrXII_964131_964649_5:0:0_5:0:0_a -CTTGGGCGATATAAGGTATCGCAAAAGATTGTGAGTAAACTCCTGCGCCAACACCCTCGTAATTGGCCTTATTTTGTACAGGAAGAGGTGCTGAATGAGATCCAAAGAAAAAATATGGTTTCCCTGATACAGCAGCTTTGACTAGAGCCTTTTTGTCATTTGGCAGTTTCGCAACAGGTTTGCAAAAATTTACCGGATTT ->chrXII_1019223_1019749_5:0:0_4:0:0_4 -ATGGTACCACGCTATTTCTCAGAAGCTATTAACGGATTCAAGGATGCAACTATTTCAAAGAAGATTATAGGAATGTCTCTGTTGATGAGAACATTTTTATATACCCTGGCGCAAGAAACCGAATGCACGAATCGTCATACGCTTGCTCTGGAGACCGTCCTGATTAAGATGGTGAAGATGTTGGGGGACAACGCAGGGTA ->chrXII_1023125_1023595_6:0:0_7:0:0_d -CCATAGGAGTTGCGCTTATCGGAAATACACCATTCTAAGCCAGACCAAGCTAAGCATGACACAGAAATGAAACCTGCAAAACACCACAGAAGCGCAAACCATGTAACTCCAAGATGGTAAGAAAACCCGAAGGCCTCAAATTCTGTATTAATTCTAGACTGAATAGTGTAGATAACCCAGGCAAGGCTTATGCTACTTAT ->chrXII_1036541_1037023_5:0:0_5:0:0_10 -TTAAGGGATGCCAGAACGTGTATAAAAGAAATGCTTGCACGGAATATACAGATGCTACATTTAGAACGGGTTCGTCCTTATCTGATGGAGTATATCGAATTATTGGAGATATTGTGATTTCTGATAAAACTGACTTTACTAGCAGTGATAATCGAGTCAATAAGACTGTAGCCCCAAATTTCCGCCATAAACCAATGAGC +>chrVI_18396_18897_3:0:0_4:0:0_0 +GCACTCATCCAAGGATGGCGCTATTTCGTACCTTTTGATGCGGGCAATTTTGTTGATGCTTATAACCTTCTGCCTGTTGGAATTTTATTGTCTATTGGCATATGTGTTTTTAAGAGCAATCATTTTAGAACTGTTGATTTGCGGTCAATCAACCTAGACGAAGGACGAAGAAAAGACATGGAGGCTGATCTTTCTGATCA +>chrVI_38233_38753_3:0:0_4:0:0_2 +ACGAACGATAGTTTATATTACTACTTCACCAATTGTTTATTTCTTATTGGAGTGTTGCCTACATTATGTTTTACTTCTTTCAATTATTCATAGCTACTTCGTTGCTGAAGTTAGCCAGGTTGTCCGGTTTAGCGGCGACCGGATCCGTCGCCACCACTGGATTAGCATTTGTGTTCTTTACTTCATTGTCCAGCTTAACA +>chrVI_118934_119464_5:0:0_3:0:0_1 +GACTTGAAATTACTTAGTTCTAAGCCAACTAAACGTCCCATTGCGTCTCCTTGTGCCTGCTTTTTATCAATAGCCTCTGGATGCTTGCTTTAAGTGATTTTATGAGATGTGATATTAGCGTCTTCGGTCTTATAGAATCCAATACTCTATTCACTTTACGCGTTATTGATACTTTATTTTTTTTTCGCGTACGTGTTTAT +>chrVI_184780_185293_1:1:0_8:0:0_3 +TTCGAACATTAAAGCTAATGCTAACACTAGTACCAGCGTGAATAAGAAAAATTTGCCGCCAACAACTAGTGGGAGGATACCCTCTAGCACCATCAGGAGATATCCGAGTCGCTATAAGCCTTCTCACTCGCTGCAGCTTCCCATTAAGAACGACTCCAACTTTAAACGATCTAGCATATATGCCTCCAAATCCACTGTTA +>chrV_124419_124957_4:0:0_4:0:0_5 +TAAAAGAAATGGTTGATGTGCCTATCGGCCTTATGGGCACACATGGATACAACTTTAACAACTGTAGTGATATGGCATGTATATTCATTGGAATGGGTCCGATGTTCAACAATGAAGTCGTACCTCCATTTGAAAACATCGAAGTATACAATATGCTGCTCAAGGCAAGTGCGCTTTTGGGAGAAGAAAAGACAAAGAAG +>chrV_151218_151704_3:0:0_8:0:0_2 +TCATGCGCTTGTGATTATCGTATAGTGTATATATATAATATATATAGATAGCGATAAATGGCAAGATCCTCTATGATAAAAGTCAACATAATGAAAACAGATGGCGCTTGTCTACTGTTTGCAAGGCTTGAAATCACAGGTTTTTATTATATCGTGGATTTTTGCCATTGCCTAACTCAAAAATAATGATCGATTTTTTG +>chrV_234738_235208_3:0:0_5:0:0_3 +TTCTCTCAAAGTTATCACTTTGGGATTATAGGATACTTGTAAAACCTCCGCAAAATCTGTGTCACCACCACAAACTCTCTAATAAGAGACACTATAGGGGCTATCCTTTTTAGACACTTCTCCATTAGCGTAACCTACTTTACAATCCACTATCCGTTCATTCAAATACTTCCTATACATATGTTCTGTACCCCAAAAAC +>chrV_278567_279041_6:0:0_2:0:0_6 +ATGTCCAGTGGCTTGCTTTTGGATCTTCCTGGTAAGCGTGCTGAGGCTACTGCCAGACACTCTGCTTTATCGCCTAGTAAAGTTTATGTAGCATGTGCATTGACGTAGTCAAGATCATTTGGTTCTAATCTAGCCATTTTTAGAGCCATCTCTATTTCTCTTTTGGCACCATTTCCATCAGCAGGAGGGGAGGTAATATG +>chrV_436297_436806_7:0:0_5:0:0_7 +TATTGGTGAAGATTGAACATTCATTTTCTTATGCTTATATAATAGAGGAATGAACACACGCATATAGGATCATTATATAGTTATGGCTCGTATTATCATGGCTCTGGTCATTTCATACATTTGATGTCGTCACGACTCATATTATTTGCTCATATAAATAACTTCCTCAAATATATAAGTTCCTCATCAAGTTCAATTAA +>chrV_479347_479873_3:0:0_3:0:0_4 +ATGGATGTGTTTCATATATCAGATGAGTTCGTATTTAAATCGGTATACGATAATGATGGTAAATCCCGTCCTGCTAGTATGGTCATATAACCACCAAAGAGATTCTCACAACACTCTTCCATGCTTATTAATAATCCAGCTACTCCAAACCAAAAGATGAGAGATTCCTTGGATACCACTGGAAGACTAAGTAAGACATT +>chrV_482784_483296_3:1:0_7:0:0_0 +TCCCTTATCTATTTAAACATATTTAACAATACCACTATTTATTCTGTATAGTAAGTAAATCTTTAATGCAAGCAAAAATCTTCCCTCCGCGAATCCTGAAACATATTCCCCTCGGTGAAACACGCTCTTGCAAATGACCTGAGAACACAAGATATCAGACGGCTCTTGTTGCACAAAAAACAAAAACAACAGAATCAAGC +>chrV_498912_499362_2:1:0_5:0:0_8 +TTGTAAGGAAACGGGTTGTGGAAAAAAAAAAATACAACTACGTTGCCGCGAATCTTGTTGAAAAAGGTCTGAAATTAAGGCAAAAATGATACTGGAATTGTTAGTCTAGTATAATCGATCAACTGCAACAACCAAGTCTTTAAATTTTCAGTCCCTCTTGAAAGAATAGTGAAGGTTCATTTTTATTTTTACATAGTAAA +>chrV_573344_573800_1:0:0_1:0:0_1 +TGCTAGCAAGATCATCGTAGATCCCCACGTATAAATCAGTAACGCCATCGCAACCTTCTTCAATAAAGTTTCTTACAGGGGCCACATTCAATCAACCGCATCGGCTCAACCTGATCATGCAATTAGCAAGCAACACTGTGTACGGTACAAACAGAAACGACACATATTTCACGTCGCCCTTAGACGCCAGTGCTATCAAG >chrXIII_88166_88586_6:0:0_6:0:0_a AGATTAAACCTAGATCCTAATTTGTTAGCAGGTGTCGTATCTCAAGCTATGAAAATGGTTAACCTAGATGACAGCGCTAATGGACAAGAATTAATGAACTTTTTCACTCATCCAGGTGAATGGGACAAATCTTATCCTTTGACACTAGGTTCTTTCATCAGGAACTCACCCAGAGGTGGTATAAGAGAATTTACGAAATT >chrXIII_93863_94369_5:0:0_3:0:0_7 @@ -300,6 +218,42 @@ TTTTATACGTTGTTCTGTCAATAATTTGGAAATCAAGGACAAACTTTCCAAATCCTTTTTGACAGGTGATGCTTCGCTCTTGGGTGTACCGAGTATCCTGTCAACATCTACATAAGTGGCCTTTGGGAAGTTGGACACAATGCCTTTCCGGATTTTAAAACTGTCATACATAATTTCAATTGATTTTCCACTGCATTTAG >chrXIII_875476_876017_4:1:0_2:0:0_e ATTCAGTTGCAGATCCCAAAAGTCCACCACTCTAGCAGATTCATAATCAACATTGATACATTTAATATAACTTTTCATTTTTCCGACAAATATTACATTTAACTTCCCCTCCACGGGTGTTCCCTTCATATTATTTTCCAGCCTGTCCATTAATATCCTATTCAATTCCTGCACATCGTGTTGAGTGAAGGATTCCGCAG +>chrXII_14440_14929_3:0:0_4:0:0_0 +TACAAGACTAAGGTTTCTATACCTCAACCAATTGATACTTTATCTGGAATTATGGTCAGTTCGTGGGCAAAAGTCAGCCTTTATGACGTTGAATTCAATCTAGGGCTTGGGAAGCCCAAGAGTGTACGACGTCCGCGCTTCATTTCCCTTGAGAGCCTAATATATTTTATGCCTAGATCCTCCAGAGGTGAAATGGTGGT +>chrXII_79515_79982_3:0:0_9:0:0_e +AAGTTACCTCCTAGGTTCAACAAGGCGGTGATTTAGGTTATTGACGCATTGAGATTTGATTTCGCTATTCCTGTAAACGAATGCCACTCTAATTACAACTTTAACAAACATAATAATATATTATCATTGAATGATTCTTTTGCAAGCGATAAGGATGCATCTTCCCTATTGTAGAAGATCATTGCCGACCCACCAACCAC +>chrXII_179129_179604_4:0:0_3:0:0_c +ATTCAAATCACTTCCTTTGACGGTGGATAAGAGCTTCCAAAGAGAAAACAGTATATTGAGCGAGATTAATAGGTGGAACAAGTAGTCAAGACGTTCTGCATTCACCCAACTGACCGTGGTGTGATATATGATGTTAGCCTTCTTTAACGTGTGAAATGTCAACATGTACAGATGGATTCTGGATAGCCGGTTGCAAAACT +>chrXII_219746_220211_0:0:0_2:0:0_f +AAATATGTCAGACCACCACCAATGTTAACCTCACCTAATGATTTTCCAAATTGGGTTAAAACATACAACAAATTTTTACAAAACTCGCATCTCGGTGGTATTATTCCGACAGTAAACGGAAAACCCGTACGTCAGATCACTGATGATGAACTCACCTTCTTGTATAACACTTTTCAAATATTTGCTCCCTCTCAATTCCT +>chrXII_224837_225269_7:1:0_1:0:1_7 +TACTAAGCAAAAATGAATTCTAGTAATTAATAATAATGATATAAAAAAGGCTAAGTGCACAATACTAAAAACGAAACTAAGATCCTTAGAGTGATTTGATATCACCTGCGAAAATACCTTTTTGTCTTTGATCATCCGATTTTACGATCCAGTCTAGGGGACATAAGGCGTTATAGGTCTTCCAAAAGACCTTGCACGGA +>chrXII_329567_330050_4:0:0_5:0:0_3 +GACATGAAGCGACAGAAGCCCTACGGATGTGCGGCTGGAAAAGAAAGTTTCATGAAGAACCAGTTGATATATATTTTACTATATACTTTTGCTGTGTATTTCTATATGAGGCTAGTTGGTTGGTGGGAACTGGAAGTGAAAGTACTGATCTTTAGGGTGCAGCTGTTGGTGTTGCTGTTGCTGTTGCTGTTGCTGCTGTG +>chrXII_343172_343673_10:0:0_4:1:0_9 +ATCATTATTTAATATGTCATCCAACCGTCTCATATTAGGTTACGAATTTGTTACACATTCTGGCCTTGCTAACCTCTCCAGGTCATCTTTGTTGCATCCAGGTACACTCTCTACCAACATTTAACCATTGCCCTCCGGATTCGCACTGTCATATTTATTAGCCTCTTCGCCGCACATGATGTCAATATCGGGTCGATAGC +>chrXII_349489_350011_4:0:0_4:0:0_6 +TTTGACGGAATTTGACAATAGATAACCCTCCAGCCACTAGCTGAGTTAACGTCTTGGAGACCAAGCATAAACTATCAAAAGCGAGTTTAACGCATTTAGATTCGCTCATAGACTTAGAATCATCAAGCGCAATCATTATTTGATACTGACGTTTGCTTGGTTTAGTTCTTCTCAACCAGATTTTATCTATACGGAATTGT +>chrXII_394208_394614_2:0:0_5:0:0_b +GTTGACATTTATTGATGTATCTATTTCTTTGAGGGTTAATTAAAGATAACAAATTGCTTTCTTCCGCTAATTTGAGCCTATTGAATTTACTGGGAAATGCCAACGTGGTCAGACATCAATTCAAGAAGTTAAGTTCTCAGAGAGTGTAACTTGCCTGTTTGGTCGCTGCAGTGAAACTGCCATTAGCTCTTTAGCACAAC +>chrXII_625955_626443_7:0:0_4:0:0_11 +TTTTTTTCATTTTTCATATAAAGAAGAAACACTGATATTATTATTATTCATCCCAAGAACGCTATAGTGTATATTCCTAGCAAGAAAAAAATAAGCAAAAAAATTGTATAATGAGCACTGCAACTACAACAGTTACTACCTCCGCTCAGGCTTCTCATCCTACCAATATATATTGCTCCGGTTTGCAATGTGGTAGAGAA +>chrXII_662505_663100_5:0:0_6:0:0_1 +GAGAGCTACCTCCATAATGTCACTTTTCATTAATGAAATTGACTTATTTTGTATACAGCTAAGGCAATAGGACTTCGCTCGAAGGAAGAGAAAAAAAGAAAAGAAAATGTTTGGATCGCTCAAAACTCCTAGTATATTTTCAGAGGGCCTTCCACATATATTTCAGTTTGTGCCAACGAAAGTTAAAAGAAAAGCAAAAA +>chrXII_804157_804654_4:0:0_5:0:0_2 +ATGGGCGGAGCAGATGATGGAAGTGGTGGTTGTGAAGGAGATTTATGATTTTCGGTTTGAATCTTTGTGGAAGAAACGCCGACGACGGCTCCTGGTTCAGACGTCCTGGCATTAATTTCTGCCAAAAATGGCAACCCGCCTGCAGGAACTTCAGAAGATGGTGGTGAGACTGCGTTATCTGTAGGTTTAATGTTTTTTGA +>chrXII_807598_808081_4:0:0_5:0:0_8 +AGTCGGCCAAGAGTTCAATGTCTTCAAAAAAGTTTAATAACACCACGCAGTTCGGAAGTATTAGTTCTACCAAATTTACTTCGGGATTATCTTTGCTTACTCGAAAGTCATAGAGCGTATTGACTAGTTTTAAGTTTATTTCATTTAGAGTCAACGAACATTTATCAAGGGTGGCACCAGATAATAACTCAGCATAAGGG +>chrXII_964131_964649_5:0:0_5:0:0_a +CTTGGGCGATATAAGGTATCGCAAAAGATTGTGAGTAAACTCCTGCGCCAACACCCTCGTAATTGGCCTTATTTTGTACAGGAAGAGGTGCTGAATGAGATCCAAAGAAAAAATATGGTTTCCCTGATACAGCAGCTTTGACTAGAGCCTTTTTGTCATTTGGCAGTTTCGCAACAGGTTTGCAAAAATTTACCGGATTT +>chrXII_1019223_1019749_5:0:0_4:0:0_4 +ATGGTACCACGCTATTTCTCAGAAGCTATTAACGGATTCAAGGATGCAACTATTTCAAAGAAGATTATAGGAATGTCTCTGTTGATGAGAACATTTTTATATACCCTGGCGCAAGAAACCGAATGCACGAATCGTCATACGCTTGCTCTGGAGACCGTCCTGATTAAGATGGTGAAGATGTTGGGGGACAACGCAGGGTA +>chrXII_1023125_1023595_6:0:0_7:0:0_d +CCATAGGAGTTGCGCTTATCGGAAATACACCATTCTAAGCCAGACCAAGCTAAGCATGACACAGAAATGAAACCTGCAAAACACCACAGAAGCGCAAACCATGTAACTCCAAGATGGTAAGAAAACCCGAAGGCCTCAAATTCTGTATTAATTCTAGACTGAATAGTGTAGATAACCCAGGCAAGGCTTATGCTACTTAT +>chrXII_1036541_1037023_5:0:0_5:0:0_10 +TTAAGGGATGCCAGAACGTGTATAAAAGAAATGCTTGCACGGAATATACAGATGCTACATTTAGAACGGGTTCGTCCTTATCTGATGGAGTATATCGAATTATTGGAGATATTGTGATTTCTGATAAAACTGACTTTACTAGCAGTGATAATCGAGTCAATAAGACTGTAGCCCCAAATTTCCGCCATAAACCAATGAGC +>chrXII_1065644_1066121_6:0:0_4:0:0_5 +TTTGATTAGGCCAGACTTTTCGTCTTCGTAGAATGACCGCACTTGCGTGGGGATCGATTCAAATAAAGTTATTGAGGGACAATGTACGAAGTCGTTTTTGTTATTTAGCGCCGACTCAAACTCGTCAAAGTTTGCTTTTTCAAACTTACGCCTATCGGAAACTTTCAATTTATTTTTGTAAGTTTCGAAATTAACAATAG >chrXIV_19790_20275_3:0:0_6:0:0_0 ACAAATTTTTCTTTAAATTTTTTTAGTGTTAAAGGCCCTGAACTGTTGAATATGAACATTGGTGAGAGTGAAGCTAATGTGCGCAGAGTGTTTCAAAAGGCGAGAGAGGCAAAACCTTGTGTCAAATTTTTCGAAGAAATCGATTCAGTAGCACCGAAACGTGGTAATCAAGGTGATTCGGGTGGTGTAATGGATCGTAT >chrXIV_22782_23237_1:0:0_5:0:0_2 @@ -326,6 +280,60 @@ TAAGACTGAAGCAGTACCCAGAAATGGCACTTTTTGTTTATATGACATAGTAAAAGTGTTCATTTGGCAGAAAACAAGGGTATCTGGATACTGCAATCCTCAATAGTTGGGGAGAGCTTTTATAAAGTTTTATTACTTCGATAATGCTTTGCTGCAGACCTGGGCGCGCACTGAAGCCATAAACTGAGTGGTTGTCCCTG >chrXIV_758471_759074_4:0:0_2:0:0_3 TTCTATTAAGTTTCGTCGAATGTTCATATATAAGTTTCATATCGAATAATGCAGACGAAATATTGGAAACTGATTTAATTGAAACATTATCTTACGCTACTTTGACAGTAGGTGAGCCTTATGTTGCACAATCGGTGGTTGTAACAAGAGTATCTGCAGCTTCTCATAGCCCTCTCTCAGTTTCGCCAACAAATAGAGTG +>chrXI_27284_27774_3:1:0_7:0:0_3 +AAAGCCTTTGATCAGCTTATCGGTTTTGTTACCAGAATTTCCTCCAGTTCCAAATGTAAAGTTGTTACAGTCACCTTGAGAATCTGCCATGACGTTAAATGTTTTTAAGATTACATCTGTCACTCTTTGGGAAGTTAATACATTGCCTCCGACAACAGCAGCACCGGATCGGGGGCTCAAGAGTGAAGCAGCAGGTATTT +>chrXI_226703_227185_4:0:0_7:0:0_4 +ATCATCGGTCGCAGAAATGAAGAGGTCTAAATTCATAGACGTGTCTCGTATGGAGGATGGTGAGTGGGAGGAAATGCCGTGGCTACCGACAATGTTGTTATTGATAATGCTGTTATTGTTGTGATCGTTATAATTATTATTATCTTGGCCATCATTGTTGTTAGTGGCATCATCGTCTTTTCCATCGTGCTTATTGTTTG +>chrXI_302795_303272_10:0:0_6:0:0_7 +ATCCACTGTTGTGTAACGTTAGTCATATGTTATAATTTGTATTCTCGCAGTAGAGGTAATTCACGATCTTAGGATTTGCGCATGTTTATGATCATAATGTCAAAATAAACTACGTAATGCGTACTTTTAAATCGTTCTTTTGCCCAAAGTAAATGCGCATTATTATAGCATACGTTGATGTTTCCAGTATTCTTGCGATA +>chrXI_314675_315205_3:0:0_6:1:0_0 +ATTTTGGCCACGGTCTGGGAGGGAAAAGATGTGGTTAGACAAGGAAGAACTATTCTTGGTGCTACTAATCCTTTTGGCAGTGCACCAGGTACCATTAGAGGTTATTTCGGTATTGCCCTAGGCAGAAACGTCTGTCACGGCAGTGATTCTGTTGATAGCGCTGAACGTGAAATCAATTTGTGGTTTAAGAAGGAAGAGTT +>chrXI_360709_361124_4:0:0_3:0:0_1 +CGGTGAAGATGTTATATCCAAAGAATTCCATGGTGTCCAAGAAGAAGAAGGAGAAGGTGGCTACAAAATAAATATGCCCAAATTTGAACTTACCGAAGAATATGAAGAGGTCAGCGAATTGATTGAAGAGCTGATAGATACAAGAATAAGCCCAGCCATCTTGGAGGACGGCGGTGATATCGATTACCGTGGGTGGGATC +>chrXI_389403_389898_4:0:0_6:0:0_8 +ATCCATCACCCAATAAAACAACACCAAATAATGTAGATACACACATATCTATTAATTATACATTAGTATCCCCTTGACATACCCCAGTACCGTCTTCATGTGGAAAATTTTCCGTATTTGCTTTCCCCTTCTGTTCCCAAATTCTATAGGGTAAGCGATTCCTGCCTTGTTCGCCACATCTACGAGAACTTAAAGCCGGG +>chrXI_436806_437329_3:0:0_2:0:0_6 +GATGATTTCTGATTAGGAGGAGACGAAGTCCCTTTAATGCTGATTTTCTCTATCTTTTCGCCGTTATCATCTAACCCGGAAAAGTTTCAACAAGACTTTAGCCTTTTAATGGAAACTCCCACTAGTTCAGCTTAAACAAAATAGAAAAGCTTCAACAGAGGAAAGAATAACGCAAAACCACCCTTTTCACTAAGATGCTT +>chrXI_445827_446391_1:0:0_7:0:0_9 +GACTGTAAAGGATTATGATGGCAATGCGTATTACGAAATATCTGGTAAATGGAATGACGTTATGTATTTAAAGGCCTTAAAGCAACCTCGTTCTTCACCAAAAGTTTTCCTTGATACTCATAAAGAGTCACCATTGAGACCAAAAGTTCGGCCATTGAGCGAGCAAGGTGAATATGAATCCAGAAAACTGTGGAAAAAGG +>chrXI_470772_471261_1:0:0_4:0:0_5 +TAATCCTTCAAATGCCACGGATTTCGATTCTGTTTATGCAAGAGTCGGCGATAACTTGAGGGTATCCAACCTCAACGATGCTGTAGAAGAGGATGTCTCCCTAAAGGGTTGGCCTCATAAAGTTTGCGAAAGCTGGATCGAAGATGCTAGAAGAAAATTAGAAGTCCAGCGCCTGGTAGAGATTCTTGACTGTGAAATAA +>chrXI_609225_609808_8:1:0_2:0:0_2 +CTATGAATCAAACCGATAACAGAGGTGTGCTCGACGCAAAACTCGGAAAAGAACAGGAAAAAGAGGAAAGTTCAATCGAATATGAAAGTGAAGGACAGCAGGAGGATGAGAATGAAATTGAAAGCCTAAATTTAGAACCAGATCCTAAACTACAGATGAATCTTTAAAATGACCCACATCAAGATGATTTTCCAGAAGCA +>chrXI_628737_629238_4:0:0_5:1:0_a +TTTTTTTCACTTCTTGCCTCAGATATGTCAATAATACTTTCCAGGGCACCTAATACTGGTATATTGTTGTGTATATTGCCGAAGGGTTCGAGTTTGAAGACTAAACTTCCCAATATATTAGTATTTTGAAATGATGAACGATATATCAACGGAACGGTTCTGATTATTACGGCTATTGGAAAACTTCTTGACAGCTCTCT +>chrXVI_47666_48026_6:0:0_6:1:0_f +GCACGTAACCGGAAAACTCTTGGCCTAGTGTCAAAGGCGTGGCATCTTGCAAGAGTGTTGTACCGATCATCACAATATGGTCAAATTGCTTGGAATTGGCTTCAAGGGCGTTCTTTAAATTGGTCAACTCAGGTATCAACTCGTTTTGAATTTTCAAACTGGCAGCGATATGCATGACAGTGGGGAAAGTATCATTGGAT +>chrXVI_174529_175059_1:1:0_2:0:0_2 +ATCCTTGACTCCAAACATTGTCGCTCCTCACTGAATAATGAATGGCTGGAAATCAGTTGTCAAATTGAATAATTTAGGAGGCAAAAAAGCACTTCGTTTATTGTTTCCTTCTTTTTTCAAACAGGCTTTCATACTGCCATTGTTGAAAGTATATCCGTGATCGAACCGCGCGGAACTAACTACAGGGATACTCCTATGTG +>chrXVI_216257_216697_2:0:0_4:0:0_8 +TTGGGTAACGCCTATTAGGGAAAGTAGGTAGTTCCATGACCAACGATTAATGGCAATGATAGTGGGTTCTATATATGTACCGGCTCCATACATCATCTCTGTCCATTCGCTTTTCCATTTTTCGAACTGCAGTTTAGTGTTTTCCCACAATGTTGTGCCCAAAAAGACTTCGTCAAAGTTTACCGTATCAGGACATTCTT +>chrXVI_286197_286773_3:0:0_1:0:0_3 +TCCTTAGGTTAGTAAATGGCATTATAAATTAGCAAGCGTAGCCTCTTCAGCCTATACAACAGCTGAACCTGCACAATTAATGTCATGTGGCCGACGTAATGCATATCCATCTTTTTTACTCCCTTAAAAGAAGGTTTAGCCCCTACTGTATACTCAATGAACAGATAATGTCTATCCATAAAGTATATCATTTCAGGAAC +>chrXVI_289557_289973_4:0:0_3:0:0_d +ATTGGAGGGTTAGGTAATGTTTACCACTGGAATTTCGAACCTGTTTTTGCCATTTATAACGAGATACATGAGGACTTTCAAGGCATAATATCTGACGAATTGGAGGCCGAAAGCAAGGCATTTTATCACACTGAGGGCTGCAGAAGAGCAATAGGAGAAAATAATAAGTTTAATACCGTTGCTTATCACAAATACATTGA +>chrXVI_389175_389686_2:0:0_4:0:0_6 +GCAATCTCCCGTTAATTATGCTTTCCCTAACCCATACAAAATTCAACAACTACAACAGGCTCCTATCCAATCAGGTATGCCTTTACCAAATACCAACATACCTCCCCCAGCATTAAAAGTGGAAACCACCGTTACTGCTCCTCCAATTCGGGCAAGAGGGGTCAGCAATGCCTGCGTGGGAAGTTCAGCGTCTTTTGGTG +>chrXVI_401813_402387_4:0:0_6:0:0_1 +AGTTGAGAATGGCAGCTCTAAACAACGAACCAGAACGTTTGTGAAGAAGGATTGAAGCGTGTAATCTTGAAACATTGACAATGTCCAAGCAAATGCCTTTGCTCCCATTATTCTAGTGTTCACTATTACGTCCAATCCTAGCAAAGTAATATCTCCATCAATCATAGGTGCATCGATATTGATATGTTCATTATTTTTTG +>chrXVI_680224_680728_0:0:0_3:0:0_7 +GGACTACCTTTGACGCATGATAAGACGGCAAGAGACCTACCACAGCTGTCATCTCAACTAAATTCTATTCCATATTACTCAGCTCCACACGACCCTTCAACGAGACATCATTACCTCAACGTCGCTCAAGCTCAACCAAGGGCTAACTCGACCCCTCAATTGCCCTTTATTTCATCCATTATCAACAACAGCAGTCAAAC +>chrXVI_693308_693805_2:0:0_2:0:0_c +GGGCAGCAACTTCGTTACCATCAGCTGGTCTCCAAACTTGAATGTTTGGTAGGGATCTGAAGTGTGCTAAAGTTTCAATAGGTTGATGTGTTGGACCATCTTCACCGACACCGATAGAGTCATGTGTAGCAACCCAAATAACTGGGTGGCCAGACAAAGCGGACAATCTAACGGCACCAGCAGCATAAGAAACGAAGTTC +>chrXVI_752128_752641_3:0:0_2:0:0_5 +ATGAGAAGTCTTACCAGCACTTAAACTGGGATACATATGCATGTAGTGACTAGTAATATCCAAGCCCAGCATTAATTGGAAGAAAACGCACCATTGGGGATACTGCACACAAAGGAAACACATCAAGCCAGCGGTACTGGATCTGTCGGTAACCATGTCCAGAACGGCACCCAGACTGGAAACCTTATTGTACTTTCTTG +>chrXVI_763341_763881_3:0:0_5:0:0_4 +AGACTTAATCAAATATACTAACTTTGGCAAAGTCTGGGACTGCCAACTGAAACCTTTGGGATTCACTTTTTAAAAACTCTTTAGGATCCGTGGAGTTATGAACGTAAATTGTGGTGCCACCAGACCAGCAGAACGCCAGACCCGCACCATCATCTGTAATCTTATAAGGATCATGTGAACCATTAATATTTAAGTGGATC +>chrXVI_766516_767017_5:0:0_7:0:0_b +CTTTTGACCATTTCATTGATGTTATAATCAGGTTGCACAACAAGTGATGCTGACAATTTTCTATTATCAGCCTTATGCTTTTTGATACCTTCTTTGCTCTGGATACTACGCAAGACCCAAGAGTCAACGTCTTTCGCATCGTACACAGATAAAGAACCGTTATAAAGACTGTGCCGTAACAGTGGAGACGATGAAAAGAA +>chrXVI_866925_867424_2:1:0_4:0:0_e +ACGTTCTTGACGTCCTTTTTCAACCATAGTTTGATAGTATTGTCGATAGAAAAAGTACTTTGACCTGTTCCCACATTTGTAGTAGGAGCCACGGTGGTAATTCTGGAGTTGATAGCTTTAATCATCTTTTCATACTCTGCATAAGCTAAATTAAAATTAAAATATGCGTCTTTCGCCCTTAAGGCAACCCTAGCGGCTGA +>chrXVI_889501_889988_11:0:0_5:0:0_0 +CAACAAAGATTCTCATACAATCCGCACAAAATGCAATTTATTTACGTCCCCAATACAAAGCCGAATGGGCTAGGAGGCAATGCGGGTTTTCTAGCAGATATAGAGGACAAAGTTCAAATGTTCTTGACACGATATTACCTCACGAACGACAGAGTCAAGAGAAATGAAAACTACCAAAACAGTGACATGTATACTCCATA +>chrXVI_908795_909263_5:0:0_2:0:0_a +AGAGGCAGATCAGATTGGCACTCACCCTTGCCATCAATATCCCCTTCGATGCATTATGGATCGTTGAACTCGAGAATGTCTCAAGGCGCCAATGCAAGCCATTTGATTGCAAGAGGCGGTGGGAATTCATCTACTAGTGCCTTGAATAGTAGAAGGAATTCTTTAGATAAGAGCTCAAACAAGCAGGGTATGTCATGCTT +>chrXVI_912895_913350_7:0:0_5:0:0_9 +GAATATTTACCAACTGGTTGTATAACTGATCAATTTCTGAATTTTTAATTATTTCCCAGGAGAATGAATTTAGTTTAATTTGATAATGAGGATCACTAGGTTTTAGTTTTAACCTGTTCTGACTAAGGGTCTTACCTATTTCCGTTGTTTCAATATTAGACCGTATCTTTATAAGATTTCATAACGCGTCCTGGGGTGTA >chrXV_176307_176892_1:0:0_8:0:0_0 TGCACTTGGCGTTGGGTCTGTACTCACTTGGATGTCTATCGTGCGATCTGTTCAACAAAGTTCAGCTAGGAATCTGAAAATTCTATCGCTACATTCCTTAAGAAAAACCTTTTGGGAACACAAAGCTGGCCATCTGGAGCCATTTTCTGAGGGATTGGCAATATTTTGGATAACTTTAGCCAAGCTGATGAAGGTACGCT >chrXV_178018_178568_1:0:0_3:0:0_6 @@ -362,35 +370,27 @@ ATTATAGGGTCAGCGGTGTCGGTAACGACCTTAGTGTAAACGTTATTACCGTTAGTAGCAGTAATAGTCTTAGTGGTCATTACACTCGACACAGCTGCTGCCGAGACGGCAGTCATAACTGTAGTAGCTCCGAAAATAGTTGAGAATTTCATTATTATTGTTTTGTGATGGCTTTATGATAGACTTTTTTACAAGGACCG >chrXV_1059215_1059682_4:0:0_3:0:0_c TAATGATAGGGTCAGCGGTGTCGGTAACGACCTTAGTGTAAACGTTATTACCGTTAGTAGCAGTAATAGTCTTAGTGGTCATTACACTCGACACAGCTGCTGGCGAGACGGCAGTCATAACTGTAGTAGCTCCGAAAATAGTTGAGAATTTCATTATTATTGTTTTGTGATGGCTTTATGATAGACTTTTTTCCAAGGAG ->chrXVI_47666_48026_6:0:0_6:1:0_f -GCACGTAACCGGAAAACTCTTGGCCTAGTGTCAAAGGCGTGGCATCTTGCAAGAGTGTTGTACCGATCATCACAATATGGTCAAATTGCTTGGAATTGGCTTCAAGGGCGTTCTTTAAATTGGTCAACTCAGGTATCAACTCGTTTTGAATTTTCAAACTGGCAGCGATATGCATGACAGTGGGGAAAGTATCATTGGAT ->chrXVI_174529_175059_1:1:0_2:0:0_2 -ATCCTTGACTCCAAACATTGTCGCTCCTCACTGAATAATGAATGGCTGGAAATCAGTTGTCAAATTGAATAATTTAGGAGGCAAAAAAGCACTTCGTTTATTGTTTCCTTCTTTTTTCAAACAGGCTTTCATACTGCCATTGTTGAAAGTATATCCGTGATCGAACCGCGCGGAACTAACTACAGGGATACTCCTATGTG ->chrXVI_216257_216697_2:0:0_4:0:0_8 -TTGGGTAACGCCTATTAGGGAAAGTAGGTAGTTCCATGACCAACGATTAATGGCAATGATAGTGGGTTCTATATATGTACCGGCTCCATACATCATCTCTGTCCATTCGCTTTTCCATTTTTCGAACTGCAGTTTAGTGTTTTCCCACAATGTTGTGCCCAAAAAGACTTCGTCAAAGTTTACCGTATCAGGACATTCTT ->chrXVI_286197_286773_3:0:0_1:0:0_3 -TCCTTAGGTTAGTAAATGGCATTATAAATTAGCAAGCGTAGCCTCTTCAGCCTATACAACAGCTGAACCTGCACAATTAATGTCATGTGGCCGACGTAATGCATATCCATCTTTTTTACTCCCTTAAAAGAAGGTTTAGCCCCTACTGTATACTCAATGAACAGATAATGTCTATCCATAAAGTATATCATTTCAGGAAC ->chrXVI_289557_289973_4:0:0_3:0:0_d -ATTGGAGGGTTAGGTAATGTTTACCACTGGAATTTCGAACCTGTTTTTGCCATTTATAACGAGATACATGAGGACTTTCAAGGCATAATATCTGACGAATTGGAGGCCGAAAGCAAGGCATTTTATCACACTGAGGGCTGCAGAAGAGCAATAGGAGAAAATAATAAGTTTAATACCGTTGCTTATCACAAATACATTGA ->chrXVI_389175_389686_2:0:0_4:0:0_6 -GCAATCTCCCGTTAATTATGCTTTCCCTAACCCATACAAAATTCAACAACTACAACAGGCTCCTATCCAATCAGGTATGCCTTTACCAAATACCAACATACCTCCCCCAGCATTAAAAGTGGAAACCACCGTTACTGCTCCTCCAATTCGGGCAAGAGGGGTCAGCAATGCCTGCGTGGGAAGTTCAGCGTCTTTTGGTG ->chrXVI_401813_402387_4:0:0_6:0:0_1 -AGTTGAGAATGGCAGCTCTAAACAACGAACCAGAACGTTTGTGAAGAAGGATTGAAGCGTGTAATCTTGAAACATTGACAATGTCCAAGCAAATGCCTTTGCTCCCATTATTCTAGTGTTCACTATTACGTCCAATCCTAGCAAAGTAATATCTCCATCAATCATAGGTGCATCGATATTGATATGTTCATTATTTTTTG ->chrXVI_680224_680728_0:0:0_3:0:0_7 -GGACTACCTTTGACGCATGATAAGACGGCAAGAGACCTACCACAGCTGTCATCTCAACTAAATTCTATTCCATATTACTCAGCTCCACACGACCCTTCAACGAGACATCATTACCTCAACGTCGCTCAAGCTCAACCAAGGGCTAACTCGACCCCTCAATTGCCCTTTATTTCATCCATTATCAACAACAGCAGTCAAAC ->chrXVI_693308_693805_2:0:0_2:0:0_c -GGGCAGCAACTTCGTTACCATCAGCTGGTCTCCAAACTTGAATGTTTGGTAGGGATCTGAAGTGTGCTAAAGTTTCAATAGGTTGATGTGTTGGACCATCTTCACCGACACCGATAGAGTCATGTGTAGCAACCCAAATAACTGGGTGGCCAGACAAAGCGGACAATCTAACGGCACCAGCAGCATAAGAAACGAAGTTC ->chrXVI_752128_752641_3:0:0_2:0:0_5 -ATGAGAAGTCTTACCAGCACTTAAACTGGGATACATATGCATGTAGTGACTAGTAATATCCAAGCCCAGCATTAATTGGAAGAAAACGCACCATTGGGGATACTGCACACAAAGGAAACACATCAAGCCAGCGGTACTGGATCTGTCGGTAACCATGTCCAGAACGGCACCCAGACTGGAAACCTTATTGTACTTTCTTG ->chrXVI_763341_763881_3:0:0_5:0:0_4 -AGACTTAATCAAATATACTAACTTTGGCAAAGTCTGGGACTGCCAACTGAAACCTTTGGGATTCACTTTTTAAAAACTCTTTAGGATCCGTGGAGTTATGAACGTAAATTGTGGTGCCACCAGACCAGCAGAACGCCAGACCCGCACCATCATCTGTAATCTTATAAGGATCATGTGAACCATTAATATTTAAGTGGATC ->chrXVI_766516_767017_5:0:0_7:0:0_b -CTTTTGACCATTTCATTGATGTTATAATCAGGTTGCACAACAAGTGATGCTGACAATTTTCTATTATCAGCCTTATGCTTTTTGATACCTTCTTTGCTCTGGATACTACGCAAGACCCAAGAGTCAACGTCTTTCGCATCGTACACAGATAAAGAACCGTTATAAAGACTGTGCCGTAACAGTGGAGACGATGAAAAGAA ->chrXVI_866925_867424_2:1:0_4:0:0_e -ACGTTCTTGACGTCCTTTTTCAACCATAGTTTGATAGTATTGTCGATAGAAAAAGTACTTTGACCTGTTCCCACATTTGTAGTAGGAGCCACGGTGGTAATTCTGGAGTTGATAGCTTTAATCATCTTTTCATACTCTGCATAAGCTAAATTAAAATTAAAATATGCGTCTTTCGCCCTTAAGGCAACCCTAGCGGCTGA ->chrXVI_889501_889988_11:0:0_5:0:0_0 -CAACAAAGATTCTCATACAATCCGCACAAAATGCAATTTATTTACGTCCCCAATACAAAGCCGAATGGGCTAGGAGGCAATGCGGGTTTTCTAGCAGATATAGAGGACAAAGTTCAAATGTTCTTGACACGATATTACCTCACGAACGACAGAGTCAAGAGAAATGAAAACTACCAAAACAGTGACATGTATACTCCATA ->chrXVI_908795_909263_5:0:0_2:0:0_a -AGAGGCAGATCAGATTGGCACTCACCCTTGCCATCAATATCCCCTTCGATGCATTATGGATCGTTGAACTCGAGAATGTCTCAAGGCGCCAATGCAAGCCATTTGATTGCAAGAGGCGGTGGGAATTCATCTACTAGTGCCTTGAATAGTAGAAGGAATTCTTTAGATAAGAGCTCAAACAAGCAGGGTATGTCATGCTT ->chrXVI_912895_913350_7:0:0_5:0:0_9 -GAATATTTACCAACTGGTTGTATAACTGATCAATTTCTGAATTTTTAATTATTTCCCAGGAGAATGAATTTAGTTTAATTTGATAATGAGGATCACTAGGTTTTAGTTTTAACCTGTTCTGACTAAGGGTCTTACCTATTTCCGTTGTTTCAATATTAGACCGTATCTTTATAAGATTTCATAACGCGTCCTGGGGTGTA +>chrX_20624_21148_5:0:0_6:0:0_6 +TCAGCATCGTAATCTGCGGATCTTCTTTCTGGTGGCACCCATGAGGCTTATTTCCATGCTGGCACACCTTCCCGCCACATAGTATTCACCTCCTCCAGCGTCCGGCCTTTTGTTTCTGGTACACAGAAAAAGACATAAAAGTATGCAAAAACCAGACAGCCTAAGAATACATAACCGTAGTAAAAGTTGATTGCCCCGGT +>chrX_32511_32973_6:0:0_10:0:0_7 +GGTGGAGGTGTGGCGTCTCCAACTGAGAAAATATCAAACAAACAATTTTGCGACGACGAAATAAAAGCACTTGTAGATGTCGCAAATAGTTAGCACACATACGTAACAGCACACGCCTACACTGCGGAAGCTATACAAAATTGTATCAAGTTAGGTGTTAATGGTAACGAACACGGAAACTTATTAGATGAACGTACCGC +>chrX_75095_75508_2:0:0_2:0:0_2 +CAATCTACCGTTCAATTGAACAACAATCTTACCAGATCTGTGGTCATCGATGTATTCAAATTCACCAATGTAACCGTGCTTTTGCATAACTTGCAAAAACTTTATAATGACCTTGGAGGATGGTCTGATTAAAACTTGACGCTAACCGGTCTTTTCAGCGTTGTTAATGGCATTCAAAGCATCAGCTAAAACGGAAGATC +>chrX_131958_132464_9:0:0_5:0:0_0 +GTGAGCCCTTAATAATATCAAGAAGCGGCCCGCGCGCCAATGTTGCATCCTCGGATACAAATGTAGACGAAGTGTTTTTTAATCGACATGATGAAGAAGAATCCTGGATACTGGACCCAATACAGGAAAAGTTGGCACATTTGATTCATTGGATAATGAACACTACATCTCGTAAACAAACAATGAAAAACAAAATTCAA +>chrX_185042_185518_4:0:0_1:0:0_b +ATTAACTACTTATATACTTAAATTATATGTTTTTGAAATTTTTAATATGTAAAGCAAATCTGTACGAATAAAGGCTTTTTTCATATTTTATTTGCCTCAATGAAATAAATCGTCTCTTCTCTGGTTCCATAAGGGCATTTTGTTCCTTATTTCTTGCAAACGCTCACGATCCAAATCAGCGAGAATTAGTTGTGGTCCAA +>chrX_204570_205015_2:0:0_10:0:0_3 +GCACAAGCGATAGAGGAGATGTTTAAAGTGTTTAAGCTCACTTTATAGGGTGAAACACATTTTGACGACCGTAAAAGGTCATTTGATTTGGTATTGAGGTCGAGAAAATATTTTCAACTAGTGAAGGATACATTAAACACGCTCACAAAACAACATAAAAATCCGTGATAGTTTAATGGTCAGAATGGGCGCTTGTCGCG +>chrX_358634_359139_4:0:0_4:0:0_9 +ACCTGCTTATACATCAAAGCGAACACCTACAGTATAAACAAGGGTTCCACGAACTATTAAGCGTCATTTATCTGCAATTATATCACGGTACATATCTCGATAATACCGATTAGCAAAACGTTGTGATTATCTTTAACAAGCTAATGAACCAAATCGAACCGATTTTTTATAACGAAGAAAATTTGATTAACTGGGATAAG +>chrX_382849_383384_3:0:0_5:0:0_1 +GCACCAAGAGGTGTACCTCAAATTGAAGTCACATTTGCACTTGACGCTAATGGTATTCTGAAGGTGTCTGCCACAGATAAGGGAACTGGTAAATCCGAATCTATCACCATCACTAACGATAAAGGTAGATTAACCCAAGAAGAGATTGATAGCATGGTTGAATAGGCTGAAAAATTCGCTTCTGAAGACGGTTCTATCAA +>chrX_438844_439314_5:1:0_2:0:0_8 +AGGAAAGTCGTATAATGTCAGAACTCTTTGGAGTATTGAAATGTAATGCTGGCAGAATTATTTTGAAGGACCCCTCCGCCACTTCTAAAGATGTTAAAGGATATATAGCTTCAGTTATCAATACCTGTAAGAAAGGGAGTATTACAAAGAAAGCAGAAGTGGCCGAAATCACTGTTGATGGTTTAGACGCCAATCAAGTT +>chrX_582991_583504_1:0:0_3:0:0_a +TCAACCAATTGAATTACATAAGCTGTCGATTGTCGATAAACACTCCCAAGGACAGCAGCAACAGCCGCATCAAAAACAACATGAAGTGCAGCCTGAATCAAAATCACCAATGGTTACGACACCTTTAAAGCCCAAAAGACTTGCTATACCTATATCAAGTCCGCACAGCTCTACGACAAATCAGTCACCCGTGAGCGACC +>chrX_610495_611012_5:0:0_2:0:0_5 +TTTTCAGCACATTATTACTATTTACGAAAAAAGGGAGTAGGGAAAAATGGCGCGCTTATGGATCCTCAAATAAGGACAAAAAAGTCAAGTAATGAATATCAAATTGAAATGAGTATGCTTACATAGATTTATTTGGTATGTTTTCATTTTGTTTTTGTTTCTTATGTTGCTGCTTTATTTTGTGTAGGTAATAAGGAAGA +>chrX_743509_743937_3:0:0_2:0:0_4 +ACAGCTCGAATCCCAAAAGATTGTTCTACCTCAAGATCTTTTCAGAAGCAGCTTTACCTGGTTTTGTTATGAAATTTACAAGTCCTTAGCGTTTCCGAACTTGATGCTATTATGGCTACCACTTAGCGTCTGGTGGAAACTTTCCAACAATTGTATTTACCCACTTATAGTTTCACTTCTGGTCCTGTTTCTGGGACCAA diff -r a0d039fa9771 -r a8d69aee190e test-data/samtools_fastx-out3-2.fasta.gz Binary file test-data/samtools_fastx-out3-2.fasta.gz has changed diff -r a0d039fa9771 -r a8d69aee190e test-data/samtools_fastx-out3-3.fasta --- a/test-data/samtools_fastx-out3-3.fasta Mon Mar 12 12:53:10 2018 -0400 +++ b/test-data/samtools_fastx-out3-3.fasta Fri Sep 28 04:39:19 2018 -0400 @@ -1,11 +1,13 @@ ->chrI_25874_26397_2:0:0_7:1:0_2 -ATTTCAGTGGATGTAGAGGTAAAAGTGTCGTTCCATGGCTGAGTTGTAGTCATGGCAGTAGTGTCTGTTGTTGGTGTTCTGATGACAATGATGGTTTCATCAGTTGGCAAACCGTTGGTACCGGTGACGGTGGTCCTTTCAGTGGATGTAGAGGTAAAAGTGTCGTTCCATGGCTGAGTTGTAGTTATGGCAGTAGTGGC ->chrI_93599_94144_3:1:0_9:0:0_1 -TGTTATATCTAAGCCTTCCAAGCGACCCACACACCATTCGCATTCATCAGACGGGAGTTCTAGCACGCAGACAGATATATCGTTACAGAGCTTGCTTTACCATGATCTTGAAAGCTCACCAAAGAAACATGTTTCGCCGTCAAGACCGCCCTCTGTAGCTTCCGAATCCTCTCCTGCCGTTGCTCATCCCATTGGGCTTT ->chrI_139586_140147_6:0:0_3:0:0_3 -TGCAGCGCCACCTGGAGCACCACCAGCTTTGTACAACTTAGAGATGATTGGGTTGGCAATGTCTTGCAAGTCCTTCAACTTGTCATCGAATTCTTGCTTGCTGGCAGTGGTGTTGCTGTCTAACCAAGAAATAGTCTCTTCAGGCTTCTTGGTGCCGGTGTCCTTGTCAGCTTGTTCCAATTTGTCACCAGCTTCAGAAA ->chrI_176449_177020_5:0:1_5:0:0_0 -TGGTCAAATTAACTTCAATCGCTGCCGGTGTCGCCGCCATTGCTGCTGTTGCCTCGGCCGCAGGAACCACTACATTAACTCAATCTGACGAAAGAGTTAATTTGGTTGAATTAGGTGTTTATGATTCCGATATCAGAGCTCATTTGGCTGAATACTACTCTTTCTAAGCTGCTCACCCAACTGAAACTTATCCAGTTGAA +>chrIII_58852_59360_5:0:0_4:0:0_4 +AATTTATCATTGCGTGGGTACAACCGTGCACCATTTCTGAAAAATTTGCGATGAGCATCCCTCAAAATCCGTATTATCCGCTAGTGTTTTGAGGTTCAACAAGACAACATATAAGAAGGGAAGAAGGACAGGAGGCAATGAGAACTTGGGTCTAGCTCGAGAGTCCAGATCCACATGCAGGTTCAAAAAATGGTGCGAGA +>chrIII_65894_66394_3:0:0_8:0:0_1 +ACAATCAAGCTTTACACCTGCCACGTGTGGAACTTGTTCGTACATGTATTGCTCACAGTACGATCGTTCTTTGTGACGGTTACGAAGAAGCCCATGAAATGTCCAACCAATATGCACCATAACATTTGATTCTACAAATCGCCAATGCTAACGATTATGTTAAATTGGTTGACAATGCATGGTCCTTATTTGTGGGTGCT +>chrIII_80246_80792_1:0:0_3:0:0_0 +GTTTCAAACTGGACTCTGTAAGGGGATCGAATAAGAAGAACCGCAATAAGATAAAGAAAACCAAAAAAAATAAAAGATCTAGCACACTTTCGTCATCGTCATCATTATTATTGAACAACCGAAGCATACAATCTACGCCACGCAGACGTCCATCCAAGAGGCATTCCAGGGAATTCTCTTCTAGCAGGAAGAGATCGTCC +>chrIII_209470_209900_3:0:0_9:0:0_2 +TCGATGAACTGTCTCCATGACCTGTTGGAATTCGACGTGAATTGTTGGAATGCTGTGGGATTTTTGAACCTCACCAAATACTCCTCTGCGTATGCGAGGTTGACCAGCAAAGAGATGAGTATGCACTGTGGCTTCCTGACGAGTGTTTTTTTGCTGTTTTTCTTGGCGGATGTTAGAGGATGTCTAGCACTTGAGTATAC +>chrIII_238949_239533_6:0:0_6:0:0_3 +AAAATAGGCCATTGCGAGTCTTTCAGGCCTGTCATGTTTTAAGTAAAAGTTTTCTTCATCAAATTTGTGCCCAAAGACGGTGAAAGGACCCACATCTGGGGCAACCCCACCACCGTGGATATACTTGTTAGGGTAAACCTTGTTGATTTTGGTCTTACGGAACGAGTAAGTATGTATATCATTGGGATCTTTCCCTTCGA >chrII_128532_129141_1:0:0_5:0:0_c ATGCCAATAGAAACAACGGCACCCAGTCAGGAAATGAGACAGCAAATCCAAACTTAACTGAAACATTAAGTGATAGGTTAGATGGTTATTTGAATGAATATGGTATTCCAAGAAGTCAATCCTTGACATCGTCTGTTGCAAACAATGGTCCTCAATCCGTAAGAGATGATGTTGCGCTACCGGAAACGTTGGAAGAACGT >chrII_178741_179333_0:0:0_5:0:0_7 @@ -32,16 +34,6 @@ GGGGATGCTCGGTGCTGCTTATGTATTAGAAGCAATTGCAAATGATAACATTATTCCTGGTTTGGAGATTTTTGCTCATTCACCGTTATATTCATTGATTTTTACATGGATTCTAACACCGCTATGTTTGTTTTCAGCCGTCAATAAAAACGCCACATTTATCACAATGACATTCTTAATGACGTTTGTGGTCATGAATT >chrII_798295_798806_6:1:0_5:1:0_a ATCAATACTAGATGTCACAGCCACTTTGGATCCTTCTATTATGTCAATCATTAGATTAACTCAGTCAATAGCAGATTTTTTTTACAATGGCTACTGGGTGGACATCTCCAAACAATTCATGTCACTAAGCCCGGTTATCGATATGAAGAAAATTATATATAAACGTGCTGAAGATGATCTTTACCTTGCGGTTATTTTAC ->chrIII_58852_59360_5:0:0_4:0:0_4 -AATTTATCATTGCGTGGGTACAACCGTGCACCATTTCTGAAAAATTTGCGATGAGCATCCCTCAAAATCCGTATTATCCGCTAGTGTTTTGAGGTTCAACAAGACAACATATAAGAAGGGAAGAAGGACAGGAGGCAATGAGAACTTGGGTCTAGCTCGAGAGTCCAGATCCACATGCAGGTTCAAAAAATGGTGCGAGA ->chrIII_65894_66394_3:0:0_8:0:0_1 -ACAATCAAGCTTTACACCTGCCACGTGTGGAACTTGTTCGTACATGTATTGCTCACAGTACGATCGTTCTTTGTGACGGTTACGAAGAAGCCCATGAAATGTCCAACCAATATGCACCATAACATTTGATTCTACAAATCGCCAATGCTAACGATTATGTTAAATTGGTTGACAATGCATGGTCCTTATTTGTGGGTGCT ->chrIII_80246_80792_1:0:0_3:0:0_0 -GTTTCAAACTGGACTCTGTAAGGGGATCGAATAAGAAGAACCGCAATAAGATAAAGAAAACCAAAAAAAATAAAAGATCTAGCACACTTTCGTCATCGTCATCATTATTATTGAACAACCGAAGCATACAATCTACGCCACGCAGACGTCCATCCAAGAGGCATTCCAGGGAATTCTCTTCTAGCAGGAAGAGATCGTCC ->chrIII_209470_209900_3:0:0_9:0:0_2 -TCGATGAACTGTCTCCATGACCTGTTGGAATTCGACGTGAATTGTTGGAATGCTGTGGGATTTTTGAACCTCACCAAATACTCCTCTGCGTATGCGAGGTTGACCAGCAAAGAGATGAGTATGCACTGTGGCTTCCTGACGAGTGTTTTTTTGCTGTTTTTCTTGGCGGATGTTAGAGGATGTCTAGCACTTGAGTATAC ->chrIII_238949_239533_6:0:0_6:0:0_3 -AAAATAGGCCATTGCGAGTCTTTCAGGCCTGTCATGTTTTAAGTAAAAGTTTTCTTCATCAAATTTGTGCCCAAAGACGGTGAAAGGACCCACATCTGGGGCAACCCCACCACCGTGGATATACTTGTTAGGGTAAACCTTGTTGATTTTGGTCTTACGGAACGAGTAAGTATGTATATCATTGGGATCTTTCCCTTCGA >chrIV_125433_125964_0:0:0_4:0:0_10 GGAACGCACGGATTCATCTCTCTTTGTTGAACCAAATGGATCCGATCTTCTCTAGTTGAATTGTGCTGTGCTAAGCTGATATGGATGGGTGCCATTAATAGCTTCAATAGCGCCACGATGTGAAGATGCAGGTGGCCTCCATTTTACAAGTACGTCCTCCATTTTTCCCACAAATACATTTTCTTCTCTTCTACTTCTGC >chrIV_144073_144624_1:0:0_7:0:0_b @@ -56,8 +48,6 @@ GCCTTGGCCATGACAGTGCAAGTGCCTCTTCCGCTTCCAGAAAATTTGAAATAGACTCAAAGACAGGCCTTCAAAGACGTGTAATTGGACAGTACAACAAAGATCGAAATGATTTCGATTTCGATATTGATGACCTAATTAACGCAGATGAACTAGATGAACGGATAGACGAAGAGAAAAAGTAGAAGAAGTACAATGGT >chrIV_249898_250451_2:0:0_3:0:0_8 GAACTGGCCGAATTAAACATAGAATACATTGATAAGATGACTTGGAAACGGTGTATTAGAGACGGAACTATGACATTAGACAGTTGGGCTCAAACAACTTTTTCAGCAAGATCCTCAACTGTTCTGGAAAAGTTAAGAGGCATATACCTTTTTTGCACAGAGATGTTTGCTCTGACTGATGATAATGGAACGTCAGATTT ->chrIV_876300_876846_11:0:0_4:0:0_0 -TGTTGAGCAAGTGTGTTGATGTAGTATAGTAAGTCAAATCTAAATTTATATCCAACATATGAAGCTAGCCCAATCAACTTTTGCATTTCATGCACTTTCTCTTTGTATTCATCTTCATCTATTTCTAGTTCAACCTGTTCTATATAATGACCTGGTTGACCTGGAGCTCTAAGTTACTTTCCTTTTGGGTTCAAAGGTAC >chrIV_559435_559935_6:1:0_2:0:0_18 TGCGCCCACATTGTCCAATCTTCTACCCAATGAAAAATTATATGGACCAACGGATAGAGACCCCAGAACTAAAAGAGACGATATTCACTACTTTAAATATCGTCATGTATACCTTTATGACCTATGGCAAACTTGGGCCCCCATAATAACTTTGGAATGGAAACCTCAAGAACTAACAAACTTAGACGAACTACCTTACC >chrIV_563824_564394_8:0:0_2:0:0_5 @@ -66,16 +56,18 @@ TTTCAATATGAAATAAAAATAACACTTTCAATACAATTGTTCAAACACAAGCATGACAAGTGAATTTGGAGTGTTTATACTTTACTCAATGACTTCAGTTAGTTGAACAATTGCCTTTTGGAAGGTACATTACAAGAAATCAAAAACTTCATGAAGCCATTAAAAAAGATGAAAAAACAACTGAAAACAACGAAAATCCT >chrIV_643692_644219_1:0:0_2:0:0_3 TGGAGGAAGACCCTGATTTTTTGCAGCATGCTCTCCAATCTTAAATAAATAGATGTATTTAGTGTCAATTGAAACAGAAAAGTCTCCATTTCCAACTAATGGTATGCAAGCATTTTTATATGTGTGACATAATGAATGGCTTCTGGTTAAGTTTGGCTTTTTGAACAACCATTGCCCGGAGAAAAAAAACGCGTGAGCAG ->chrIV_882753_883176_3:0:0_5:0:0_9 -ATTTGTTTTTTGATGATTCCGAGCTATAACTTTGGGTTTGGTTGTATTCGTATAGCTGCGAGAATCATTCTTCTCATCACACCGATTTCTCCTGTAATTAGGTTTGCTGTTTCTCGATCCCTGTTGTTCTTCATAAATAGCATGGATATCTAAGAACAGTTCAGCGACTGTCATATTTAGATGTCGATGACGTGTGTAGG ->chrIV_946167_946637_1:0:0_2:0:0_4 -TCAGCTAGGGAAGGACGGGTTTTGTCTGATGTTGTTCGTTTTGTTATAAGGTTGTTTCATATGTGTTTTATGAACGTTTAGGATGACGTATTGTCATACTGACGTATCTCATTTTGAGATACAACACCTCGCAAGAAATCGACTCTCGGTAGCCAAGTTGGTTTAAGGCGCAAGACTGTAATTTATCACTACGAAATCTT >chrIV_841170_841687_3:0:0_4:0:0_f GGTTTGAGCAACTGGCCCATCAATGATAAGACATCTTGACCACCTTGTGGTCTTGCGTTTGCAACATCCAAATCGTGCAAGGTAACATCTTGTACAATTTCCTTTTTCTTATGCACTTCGCCTTTTGGCAATGGTACGTATTCCTCAGTTTCCAAATCAAATTCAGTAGCGTATGCATCAGATCTGCCCACTCGCTTAAC >chrIV_847233_847818_5:0:0_6:0:0_d TGTTTGGTCTCAACTTATTCATTTTATTCATAGCTGCCCTGAAGTCAGTCCCACCAACTAAAGAGACAGAAGCGTACTTTTTCAAGGCATAATTCATATCGTGGATTTTTTTCACCTCTGCTTCGATTTGCAAGGCCCAATCTCTTGTTGGTGCGACAAAAACAGCTTTTACCATATATTGAGAATCGAACTTCGTATTT >chrIV_870726_871233_6:0:0_1:0:0_e GCTTTCCTCCTTTGGTTGACCTTGTTGGACATAGACTGGTTGCTGCTGAGGATAACCCTGTTGCGGTGGACCTTGTTGATAATAACCTTGTTGTGGTGGACCTTGTTGATAATAACCTTGCTGTGGGGGTGCTTGTTGGTAGTAACCTTGTTGTTGGCTCATTAGTTTTCGCTCTTTTGACTTGTTTCGAAGACGGATAG +>chrIV_876300_876846_11:0:0_4:0:0_0 +TGTTGAGCAAGTGTGTTGATGTAGTATAGTAAGTCAAATCTAAATTTATATCCAACATATGAAGCTAGCCCAATCAACTTTTGCATTTCATGCACTTTCTCTTTGTATTCATCTTCATCTATTTCTAGTTCAACCTGTTCTATATAATGACCTGGTTGACCTGGAGCTCTAAGTTACTTTCCTTTTGGGTTCAAAGGTAC +>chrIV_882753_883176_3:0:0_5:0:0_9 +ATTTGTTTTTTGATGATTCCGAGCTATAACTTTGGGTTTGGTTGTATTCGTATAGCTGCGAGAATCATTCTTCTCATCACACCGATTTCTCCTGTAATTAGGTTTGCTGTTTCTCGATCCCTGTTGTTCTTCATAAATAGCATGGATATCTAAGAACAGTTCAGCGACTGTCATATTTAGATGTCGATGACGTGTGTAGG +>chrIV_946167_946637_1:0:0_2:0:0_4 +TCAGCTAGGGAAGGACGGGTTTTGTCTGATGTTGTTCGTTTTGTTATAAGGTTGTTTCATATGTGTTTTATGAACGTTTAGGATGACGTATTGTCATACTGACGTATCTCATTTTGAGATACAACACCTCGCAAGAAATCGACTCTCGGTAGCCAAGTTGGTTTAAGGCGCAAGACTGTAATTTATCACTACGAAATCTT >chrIV_1060041_1060548_1:0:0_3:0:0_1 ACGGAGGAGGCTCAACAGAAAAGGCATGCACTATCGAAACTAATTCAACAAGAGACTAAACAAGCTATTAACAAACTGTCTCAATCAGTTCAAAGAGATTCTTCGAAGGGTTATTCCATTTTACAACAGACAAAATTATTTGACAACATCATTGATTTGAGAATAAAACTACAAAAAGCTGTAATTGCAGCAAATAAGCT >chrIV_1177126_1177640_7:1:0_3:0:0_15 @@ -106,38 +98,34 @@ ACAACCACCAAGTTTCATAAAACCAGAAAATCATTTAGATTTGGATAGTCCCTCGTGCACTTTAAAGAGCGACTTGTCAGGGTTCAGCGGTCTTGATGCTATAATGAGACCATTCCCCATACCAATTCACGGAAGATTTGAGTATGCTGAGTTTAACTAATGTAATAAATCCTACCTTTTGAAATTATTAGGTAAAACTA >chrIX_405615_406160_6:0:0_3:0:0_6 CAATTAGCAAAAACAGCACCACGTTGTGGTTTCTTCTTGAAATCTACTAATCTGGGCGAATACTCAACTTCATTGGGGAACAAGCATTGATCAATGAATCGGTTCGTTTCCTCGAATTATTGCAGCACATCAGTCACATCATCATCATGGATGGGTATGTTTTTTAGCGAGTAACCTTTCCTTATTAGATCCTCTGGAAT +>chrI_25874_26397_2:0:0_7:1:0_2 +ATTTCAGTGGATGTAGAGGTAAAAGTGTCGTTCCATGGCTGAGTTGTAGTCATGGCAGTAGTGTCTGTTGTTGGTGTTCTGATGACAATGATGGTTTCATCAGTTGGCAAACCGTTGGTACCGGTGACGGTGGTCCTTTCAGTGGATGTAGAGGTAAAAGTGTCGTTCCATGGCTGAGTTGTAGTTATGGCAGTAGTGGC +>chrI_93599_94144_3:1:0_9:0:0_1 +TGTTATATCTAAGCCTTCCAAGCGACCCACACACCATTCGCATTCATCAGACGGGAGTTCTAGCACGCAGACAGATATATCGTTACAGAGCTTGCTTTACCATGATCTTGAAAGCTCACCAAAGAAACATGTTTCGCCGTCAAGACCGCCCTCTGTAGCTTCCGAATCCTCTCCTGCCGTTGCTCATCCCATTGGGCTTT +>chrI_139586_140147_6:0:0_3:0:0_3 +TGCAGCGCCACCTGGAGCACCACCAGCTTTGTACAACTTAGAGATGATTGGGTTGGCAATGTCTTGCAAGTCCTTCAACTTGTCATCGAATTCTTGCTTGCTGGCAGTGGTGTTGCTGTCTAACCAAGAAATAGTCTCTTCAGGCTTCTTGGTGCCGGTGTCCTTGTCAGCTTGTTCCAATTTGTCACCAGCTTCAGAAA +>chrI_176449_177020_5:0:1_5:0:0_0 +TGGTCAAATTAACTTCAATCGCTGCCGGTGTCGCCGCCATTGCTGCTGTTGCCTCGGCCGCAGGAACCACTACATTAACTCAATCTGACGAAAGAGTTAATTTGGTTGAATTAGGTGTTTATGATTCCGATATCAGAGCTCATTTGGCTGAATACTACTCTTTCTAAGCTGCTCACCCAACTGAAACTTATCCAGTTGAA >chrM_7124_7740_3:0:0_7:0:0_0 TATAAAATTATATCTAATAAAAATTATATATATGGAGTTTTGTTCGTTAATGAACTTAATCTCAAACTTAGCAGCACGAACTAAAGACAACAATGTAACGCCTGTAATATAATAATTATAATAATTATTATACTATTCAAAATATGGTAAGGTTAGTCGTGGATTATCGAATTAAATAACATGCTCCACTGCTTAAGTGT ->chrV_573344_573800_1:0:0_1:0:0_1 -GCGGAAGACGTAGTGGCAGGTGAGGCGGCGAGTTCAGATCATCATCAAAAAATTTCCAGAGTAACGCGAAAAAGGCCCCGAGAGCCCAAGAGTACAAACGATATCCTCGTCGCAGGCCAGAAACTCTTTGGCAGCTCCTTTGAATTCAGGGACTTGCATCAGTTGCGCTTATGTCATGAAATATACATGGCAGACACACC ->chrXII_1065644_1066121_6:0:0_4:0:0_5 -ATTGAAAACGAAAGTACGTACCGACTCCTTTATTTTTGCAGGCCGGAAATCAAGCGATGAATGAGACATCCTTCTGTTTTCTATGTTGTGCTTGAAGGGTACAGACAGTCGCTTATCTTAGTGAGATTTTGTTTGCTTTTGCTGCACCTGCATAGCGCAGATTGTGCATCTTCTCAATAGCATAAATATTCCATTCTTAG ->chrV_124419_124957_4:0:0_4:0:0_5 -TTAGTGTCATACTACATCAAGTTCATCCGCTACGACCTGAACATCGAGTTGGACCCGAAGACTTTCAATCTCACGAAATTCTTGAATTCTTTGGCAATCTTCAAAACTTGTAATAATAAAAACATAGATTTCCATTCTTTTCGATGTGTTAACCAACTATGGACACAACTCTGTACAGTGAACCTTTCCCTTGGTATGGT ->chrV_151218_151704_3:0:0_8:0:0_2 -TGAATTTACTTCATTTGTTAAGGTTAACAATTTAAGGTGTTGAATCTTTCAAATTCTGTTCTCGCCATTCCATGACAGAAACATTACGAAGTGCTAGGAGGTATATTATTAATAAGATAGTTTTTAGTTTATAATATTTGTCAACTCTAGTTGTTTACGCATAGAAAATAAGTACGTTGTAATCAATATCATGAATATTT ->chrV_234738_235208_3:0:0_5:0:0_3 -GAGTTAACGGGCACAGCGTCAAAAAATCCGCCACCACAGTTGATCGCGCCGAAAACGATGGAGTTGCGATGAGTAAAATGAAGGGCATATATAAACAAGAGTAGACAGAGACACATTTTTCAATAACATATATATAGATTTAATTGGAAAGACAGTTATATTCTAACGTCCAAAACTTAACAAGTAAATCAAGTTGCAAT ->chrV_278567_279041_6:0:0_2:0:0_6 -GCGATGCATTCAATTTTATTCGGTTAGGCATGCAAGACATCAGTGTCGCCGGTGCAAGTGAAACGAGTTTGCATCCGTTAAGTTTAGCAGGTTTCATCAGAGCAAAGTCGATTACTACAAACGGGATCTCTAGACGCTTTGATACACAACGTTCTGGATTCGTACTTGGTGAAGGATGCGGAATGATTGTCATGGAATCG ->chrV_436297_436806_7:0:0_5:0:0_7 -TTCGCAGGCAAATATGCATTTCTTATTCCAACACTAATGATTCCTGCCATAGATTGATGATTTTCGTAAAACTAGCATGTAGAACAAAAATACTCAAATGAAATTCAAGATCAAAAAAGACTCTCCTGCGTTCAGCGGTCTTTCGAGCGAATAGTAGGATTTCAGCGCCTCGCTTGATAGACGATAGTTGGTTTTTATTC ->chrXII_219746_220211_0:0:0_2:0:0_f -TATATTCGCCAGATAGACCTCTCATAATTAATTGGCATGCGACCTTGTTATTGATATGAATGCCATTATTGTTCAGTCTGTCGATAATGTTTGTGACTTTTGTTTCAAATGCATCTGCAGGTGTACTGCCATTATATTGCAAATTTGCCAGGGTCACAATGTCGTTTGCCTCTTGGGTATCAGATTGCATTTTTTCAATA ->chrV_479347_479873_3:0:0_3:0:0_4 -ACCGTAGTTGTAGTAGTAAAGCTTTTATAAGTGTTGAAGAATGTTTCTGTGAAAATCTCATTGTCGATAGTTAGTTTAACGAATGCATAATCTAGTAGTCCTATGTTATCATGGGAAAGCCCTCTGGTAGAATGACCCCTTTGTCTTTGATGATAGTAATAATTCTCAAGGTCTTTAGTGTCTACCAATTTTGAAAAGAT ->chrV_482784_483296_3:1:0_7:0:0_0 -GCTTGAACTAGCACTGGCCGTTGAAGATTTCCTGTTCTTAGACCAGAGAAGACCTTTCATTAGACTCCTGCTTCGTTAATTGTTTTTTTTGTGTCTATCCAGAAAAGGCACGATGACCGTGTGTTCTATTAAACTGAAACGTTTGCTTGTTTGTTCTGTTGGAAAAAATGGGACTGATCTGCAGTCTCCTAACCAAAGAG ->chrV_498912_499362_2:1:0_5:0:0_8 -CGTAAGAAGGGCATACGCTAAGGAATATTGATATATGTTTTGATATATGGACGTGAAATGACTAATGAAGTCGTAGAGAGTTTGGGAACTGTTTCGAGGCACTGTTTCACTTCTAACATTCATTTTCATCCCCTTTGTAATAGCGTTTTCCATTTATCCAGTTTGCCTTTCCGATTTTCAAACGTACAGTGATGAAATGC ->chrVI_18396_18897_3:0:0_4:0:0_0 -GCCTAAATTATACTTCATGCATTGGTTATAAAAAATCATGTTTTTTTACATCGGCTCTAAAAAGCGCAGAAGACTTAATCATAGTTTCATTGTACGTGTTATGCTCACTAGAGTATGTAAGGCCCTTTTCCGTTCCCACAACTTGAAATATTTATCCTGGGGGGGCGGCTGTAAAACGGTAAAATAATTCTCAAATAGGT ->chrVI_38233_38753_3:0:0_4:0:0_2 -TGTTAATACCGGTTTGCAGAACGTTAGAAAAGTTAGGACAAAAAAATGGAAAAAGTACTGGCAGTACAAGGCAGGTATTCCTATCGGTTTGAAACGGTCTCAATTGGATGAATTCAAAAATAAATATATGAAAGATGTGTTGGCGCAAACGAGTGTTCCTACAAATTTTCACGAAATAACGAATACGGATGAAACAATAA ->chrVI_118934_119464_5:0:0_3:0:0_1 -TTTTCAAGTTATCAAGCGTTATGTTTTGAAACATCTGTTCCGTTTTCAGTTTTTCAAAAAGATCGATATTCTCTTGAGAATTAGGAAGTTCTACGCTCAACCTCCCGTGGGCAGAAGAAAAACAAAAGCTACTACAATTGTGTTAGAATACAGTTCTAATATTATCAAATAAGTAGTATTCATGTTACTAGTATATTATC ->chrVI_184780_185293_1:1:0_8:0:0_3 -AATTTGGCCGCCTATCCAGCAGTGGAGTTTCCTTCTGACAGTGTTAAACGTTTTACCACAACTGAAACATTCTTTAGAACTCTCGTCCTTGATCCAATATTCCTTTGAGAGGACACCATTGTTACTGGTCATGTCCTTCTTGCGGTTGTTATAAAATGCGAACAGGAAACTCTTGGACAGGTATGCGGTCAAGGAAGAAG +>chrVIII_22151_22729_4:0:0_5:0:0_4 +CCGCTAACTCAGGTGGATGTTAGCTTTAACGTCAACCTAGAGAAGTCAAACTTATTCGAGGAATCCCAAAACCCGTAGTTTAACAAACATTTTTCATTAGAAATATAACCATAATTATTAAACAATTCATCCTGTGCACTCAATGTGGTAGTCTGCGACATGAAACAAAGTTCATTTTGTTCATTCATCTCCCATCTTAC +>chrVIII_133554_134047_5:0:0_5:0:0_5 +ATTATGAATATTGAGTGAATGAATTAATGATTGTTGCGATTTCCTAGTTGGTGAAGGCTATGATATCAGCTATGCAGAATATACTAGTAGTTATCCACCAGAACATAAGAATCCTCAAAATGTAATTAAAAATCCACTATCGTCTATCAACCAATAATTATACTATCAATATATTATGATATACGGTTATAGATGATGAA +>chrVIII_272363_272823_5:0:0_6:0:0_2 +GTAAACACCTAGCTTTTACGTCCCCTCCACAGTGAACTCAGAGCTTCCACCACCGCGATCTGTGAATGAGTAGGACCTCCGCTGTATTTCTAATGCAACGGCCTCGTCCTTGTCAGTCTGCGCAGCATATGTTTGTAACGGAAATGTGTCAAATATCCGTTTTACTGGCATGGTAACACTGAATGAACTTACCCTTGTGC +>chrVIII_311844_312317_4:0:0_2:2:0_8 +GTCTGTCGTTGGATAACGGCGAAATCTTCCTTTGTCGTTCTTATATGGAAGTGAAGAGCTTGAGGATAACTTTTAGCAATTCTGATTAAGATATGACGAACCATATTGGCCTCCTTATGTGATAGAGAGGTTACTAGTTGACGAATGAAAGTAATCCAGTACCAAACGGGTATTTCGCCTCTAAAGGAGTCAAATGCGTT +>chrVIII_342849_343228_3:0:0_3:0:0_1 +CATATCTGCTTGTTACATTTCTACGGGCGACTTAGAGAAGGTTATAGAGTTCACTACAAAGGCACTTGAGATAAAACCTGACCAATCTAAAGGCTTGCTGAGACGTGCATCTGCCAACGAGTCACTGGGCAACTTCACTGATGCTATGTTTGATCTATCTGTTTTGTCATTGAATGGTGCCTTTGATGGAGCCTCCATTG +>chrVIII_385961_386445_6:1:0_2:0:0_7 +CCGGTTATCGTTTGACTTCTAGTTCTGGTTTTGTTTCATCTACTGCACCTTTCTCTTCCCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCACCTCATTTTCAACATCATCATCATCTGCCCCTCTTTCCTTAACTTCTTCTTCTTCTTCTTCTTCTTCTTTCGCCACTATTATTCCCTTGGCACCATCGCGCTCA +>chrVIII_455213_455717_8:0:0_5:0:0_3 +ACGGTGGCGGTACGGTATATTCTGCGTAAGCAATCTGCGGACGGCCGGATTATTAATCAATGTTAGAAAAAAAAAGATAGCAGAAGTGAAGATTTCTTATTTTAACAGCGATAAGGTATATACCTGAGGGAAACTAAATCTTAAGCGGCAGAATATGTGTTTTTTCTATACAAGTACATTCCTTTTTACGTTAAGTATGT +>chrVIII_456483_456967_3:0:0_7:0:0_6 +CCCTTCTTCAACAAAACAAACAAATAAAGCGAGAACAAAGGGAACCACGAATTAAGATAATTAAACAAACAATAGATAGGAAAAGGAGATCTACGAGTAAGCGTAAGAATGATGGATATCAGCCCTACCTGTTATGGGTACATCGACGACGAGCAAGATCTAGCCCTTGTTTTCCAGGGCGTATTCAATGGAAATTTGAG +>chrVIII_495976_496487_3:0:0_4:1:0_0 +AAAGAGAGTCTACATCTTCACATAAGAAAGTGAAATTCGTTGAAGAAACAACCGTGGATAATGGCGAAGAATTGATTGTCCAAAAAGCTGTAAGCCAAACTAAGGAAGAAGAGAAGCCAATGGAGGACAGTGAAGATGAAGAACAGGAGGAGTTTGACATTCCCGCTATCGAATTAAGTGATGACGAAGAGGAGGAGGAA >chrVII_48887_49401_7:0:0_6:0:0_6 CTTCATCTTTTAAGTTGGGGAATCCTGTGGACTTTGCTCTAGATGATAACTACGATACGTTTTGGCAGAGCTATGGAGGGCAACCACACCAATATGACATTATGTTTAGTACGAGAATGGACATCTGTGTGATGGCAATATTCTTTTCGATGATTGCGGACGAGTCCTATGCTCCAAGCTTAGTGAAAGTTAACGCGGGG >chrVII_79245_79829_5:0:0_0:0:0_10 @@ -174,102 +162,32 @@ CAAGGATATTTTCTCTGTCGTTGTTGTTTTCGTACAAATATAAACAACCGGGTAACAGTCAAAGAAAAAAAAAAAAAGAAAAGGAAAAAAAAAAAATATGAAAAATTTTGTTCTGAACGAAGCGATGAGATGAGTACTCAATAGTAACATATAGGCAGCTTACACCATTAAAGAAAGAAGCAGAATGGGTTTGGCAGCTA >chrVII_1066297_1066809_8:0:0_8:1:0_0 AAGACAGATGCTTTCTTGACTTATATTTTTATAATTATTGGAATTGCCGCTTTAACTAGTAAAGAATGAGATGGTGGCCGTATTCTGCTGCCCTACATTTAATATATATTCTAAAAGGTCTGTTAATTTTGTACAACTCCTTGGCGAGAAGGAGAGGTGGCAAAATATTTGTGAAAATGGGACCCAATTTAATCAAATAG ->chrVIII_22151_22729_4:0:0_5:0:0_4 -CCGCTAACTCAGGTGGATGTTAGCTTTAACGTCAACCTAGAGAAGTCAAACTTATTCGAGGAATCCCAAAACCCGTAGTTTAACAAACATTTTTCATTAGAAATATAACCATAATTATTAAACAATTCATCCTGTGCACTCAATGTGGTAGTCTGCGACATGAAACAAAGTTCATTTTGTTCATTCATCTCCCATCTTAC ->chrVIII_133554_134047_5:0:0_5:0:0_5 -ATTATGAATATTGAGTGAATGAATTAATGATTGTTGCGATTTCCTAGTTGGTGAAGGCTATGATATCAGCTATGCAGAATATACTAGTAGTTATCCACCAGAACATAAGAATCCTCAAAATGTAATTAAAAATCCACTATCGTCTATCAACCAATAATTATACTATCAATATATTATGATATACGGTTATAGATGATGAA ->chrVIII_272363_272823_5:0:0_6:0:0_2 -GTAAACACCTAGCTTTTACGTCCCCTCCACAGTGAACTCAGAGCTTCCACCACCGCGATCTGTGAATGAGTAGGACCTCCGCTGTATTTCTAATGCAACGGCCTCGTCCTTGTCAGTCTGCGCAGCATATGTTTGTAACGGAAATGTGTCAAATATCCGTTTTACTGGCATGGTAACACTGAATGAACTTACCCTTGTGC ->chrVIII_311844_312317_4:0:0_2:2:0_8 -GTCTGTCGTTGGATAACGGCGAAATCTTCCTTTGTCGTTCTTATATGGAAGTGAAGAGCTTGAGGATAACTTTTAGCAATTCTGATTAAGATATGACGAACCATATTGGCCTCCTTATGTGATAGAGAGGTTACTAGTTGACGAATGAAAGTAATCCAGTACCAAACGGGTATTTCGCCTCTAAAGGAGTCAAATGCGTT ->chrVIII_342849_343228_3:0:0_3:0:0_1 -CATATCTGCTTGTTACATTTCTACGGGCGACTTAGAGAAGGTTATAGAGTTCACTACAAAGGCACTTGAGATAAAACCTGACCAATCTAAAGGCTTGCTGAGACGTGCATCTGCCAACGAGTCACTGGGCAACTTCACTGATGCTATGTTTGATCTATCTGTTTTGTCATTGAATGGTGCCTTTGATGGAGCCTCCATTG ->chrVIII_385961_386445_6:1:0_2:0:0_7 -CCGGTTATCGTTTGACTTCTAGTTCTGGTTTTGTTTCATCTACTGCACCTTTCTCTTCCCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCACCTCATTTTCAACATCATCATCATCTGCCCCTCTTTCCTTAACTTCTTCTTCTTCTTCTTCTTCTTCTTTCGCCACTATTATTCCCTTGGCACCATCGCGCTCA ->chrVIII_455213_455717_8:0:0_5:0:0_3 -ACGGTGGCGGTACGGTATATTCTGCGTAAGCAATCTGCGGACGGCCGGATTATTAATCAATGTTAGAAAAAAAAAGATAGCAGAAGTGAAGATTTCTTATTTTAACAGCGATAAGGTATATACCTGAGGGAAACTAAATCTTAAGCGGCAGAATATGTGTTTTTTCTATACAAGTACATTCCTTTTTACGTTAAGTATGT ->chrVIII_456483_456967_3:0:0_7:0:0_6 -CCCTTCTTCAACAAAACAAACAAATAAAGCGAGAACAAAGGGAACCACGAATTAAGATAATTAAACAAACAATAGATAGGAAAAGGAGATCTACGAGTAAGCGTAAGAATGATGGATATCAGCCCTACCTGTTATGGGTACATCGACGACGAGCAAGATCTAGCCCTTGTTTTCCAGGGCGTATTCAATGGAAATTTGAG ->chrVIII_495976_496487_3:0:0_4:1:0_0 -AAAGAGAGTCTACATCTTCACATAAGAAAGTGAAATTCGTTGAAGAAACAACCGTGGATAATGGCGAAGAATTGATTGTCCAAAAAGCTGTAAGCCAAACTAAGGAAGAAGAGAAGCCAATGGAGGACAGTGAAGATGAAGAACAGGAGGAGTTTGACATTCCCGCTATCGAATTAAGTGATGACGAAGAGGAGGAGGAA ->chrX_20624_21148_5:0:0_6:0:0_6 -CATTGAGAGGTTTGGACTCCGTACGTGTCTATTGTGGGGTGCTGCTTCTATGCTATGCTGCTTTGCTGTGTTTGCCTCCGTCGGTGTGACAAAGAAGTGGCCTCAAGGCAGCAGTCACCAAGACATTACTTCTCAGGGCGCCGGTAACTGTATGCTTGTGTTTACTATGTTCTTCATTTTTTCGTTCGCCACCACTTGGG ->chrX_32511_32973_6:0:0_10:0:0_7 -TCTCATGTGTCGTTTGAACTTTCCCTCTAATACGAAACTCTTGCGATTGATAACCATATATAGGACCCACTACATCTGAACCAAAACACATTTTAACTTTTATTTTGTGGGCAATTTTCATTGCATCAATTCCTTTGTAAAGCACCTCTGTATTTTTTCTACTATTTTCAGGTCCCAAGCAAGCACTAAATTGATCAGAA ->chrX_75095_75508_2:0:0_2:0:0_2 -AAAAACTCAAATATTTAGGACGCGCGATTACCAGCGGCATGTTTACTCGCTGGAAGATGTGAAATAATTCTTGAATATGGGTTTGCAGTTAGACAATTTCAATCTAAATAATCTTAATCGACTATTCAATTCTTAAATTGTAAGGTTTTTTAATGGCCTTTCAGTTCTAGTATTTTTTATAAAACAAGACCAACATACAT ->chrX_131958_132464_9:0:0_5:0:0_0 -GAATGGCACATTGTAAATTCAGTTTCAGAAACAGATCTGTGCCTGAGATGTTGCAAGAATTAAAGCTATCATTGATACACCGAGAAACAAATTTAAACATTTGCTTTAAAAGATTGGAATAATGGGAAAGTAACGTCATGTTATCGGGTCTTTTTTTCAAAATGTACTCTTGTATCATACTGCAATTCCTCATCAGTTTC ->chrX_185042_185518_4:0:0_1:0:0_b -CGATCAATGGGGGCTGAAATCTTATGTTTTCCCAGTGCGTTCACTATTAAAACAGGGGAAGCACATTGGTAGTTACTAGGCAGCGCACGCGCGGTTGACACTCAATGCTATGTGCTCATGCCAGGGCAGGTTGGAATGCACGATCTCAGTGATCCAGAGTGGGAGAAACAATCACATATGAGCGCTCTCGAAAAAAGCTC ->chrX_204570_205015_2:0:0_10:0:0_3 -AACTCATAGCTTCAAAATTTAATAAAAGATAATAGGATTACGTAGATGAGCCAAAAAAAATAAAAAAACGGACGTACTGCAGCCTGTTCAAGGACGGCTTGGTCGATTGTTTTTCTGTGTCGTAGAACTAGACTGAATATATATCATCGGTATCTTATACCCTCCTACAAGGTGGAAATAGTACGAGAACAGTCATCAAG ->chrX_358634_359139_4:0:0_4:0:0_9 -TTCACCTTGGCTCACTAGTTCGTGAAGCTCATCGTAAATGGATAACCAAAGGGTGATGATAGTGCATGCAATGAAAATATCCAAGGGATAATTGCACGTCAGGACGTGGTCCCAAACGATTAGCACATATTTTAAGGGTAATTCTCTTAAAAATAACAACCATGTCCATCGGATGAGCCAGATTAGGTTGGAGTGAATCA ->chrX_382849_383384_3:0:0_5:0:0_1 -TTTCACTATTTTATCTACAATACGTCGTGTTCGCAATAATCACCATCGTCATCTTCATCTTCGTCGTCATAATCAGCGGCACCAGAACCATCATCACCTCCGTACAACTTAGAAGTAATTTGATAAGCGACCTTGGACAAAGATTCGAACTTTTCATCAAAGTCTTCAGCAATGGCGGTTTCAAAGTTATCATCTAACCA ->chrX_438844_439314_5:1:0_2:0:0_8 -TGGTTTTTTCGTCATCCATACTAGGTTCTTCATCGTTCTCGGAAAGACTATCATTACTCTGCTCCTCAATCTCAGAAACATCAGCAGAGAGCATCTGCTTTTCTTTAAAAACACTTTCTGCCTCCTCTAGTTCACTTTCTTCCCCGGATGATGAGTTCAGGGTGCTACCATCAGAGAGATTGTGAGAAGGCGTGAGCACA ->chrX_582991_583504_1:0:0_3:0:0_a -GTTGCTATTAACATTATTATTGGGCTTACTCAAAAAATCGTTTATACTCTTTTTTCCCTTGAGCATATTTGGTGAATTATTTACGTCCACAAATGTCTGTTGAATTCTTTTGGTAAAAGTAGAGAGGTATTCACTTGGGTTCTGGTTACCTAATTTCTGTTGTCCATTTCGGGGCAGTGTATCTTTGAACTGTAACTCTA ->chrX_610495_611012_5:0:0_2:0:0_5 -AAGGATAAGTCCATCTCATTGGAAAAACAGTCCGGTATGAAGAAAAACATAAGCATTGGTGCTCAACTACTGAAAGAAGAAGGTTTTAGAGCTTTGTACAAGGGTATTACGCGAAGAGTGATGAGGGTGGCTCCAGGTCAGTCTGTCACCTTTACCGTTTATGAATATGTAAGGGAGCATTTAGAAAATTTGGGTATATT ->chrX_743509_743937_3:0:0_2:0:0_4 -TCGAGAAGGGTTGTTCTGAACGCTTCTTGGCAGCCCATGGCATTGAAGAAAAAGTACCTAGTATTCCAAGCCTTATTTTCATCTAAGTACGAATTTAGATTTGCTGCCACAACTTCCCAATCATGAGGATCAGAACATGGTGTGTTTTCAGTAACCTCTTTGCAAAACTGAATGAGTTGTTTCGATAAGGAACGCTTACG ->chrXI_27284_27774_3:1:0_7:0:0_3 -ATGCATCTGAATCCCTAAAAAAAATGCTTGCAAAAATGGTTGAACATTTTGGGACAACGAAGTTTTCTTGCGAAGATCGCTAAGATGATTGAAGCTTAATTAAACTACAAGTTATCATAAGACCTGAAAAAGAGGAGTATATTTTTAATTTCGATGGCACTTCACCCCAAGTTTATGGTAATTTAAATGCACCAGATGCT ->chrXI_226703_227185_4:0:0_7:0:0_4 -GTGAATGGGAACAATGACGATGATGCTGATGCCAACAACATTTTTAAACAGCAAGGTGTTACTATCAAGAACGACACTGAAGATGATTCGATAAATAAGGCCTCTAATGACCGGGGATTGGAGGACGAGAGCGGTCCTACTCATGGTAATGACAGCGGTAACCACCGTCACAACGAGGAGTATGACGTCCATAGCCAAAT ->chrXI_302795_303272_10:0:0_6:0:0_7 -TACTGATAGTCTATCTTAATCATTATTTCTTGTTTCAATCTGGAATTTGATTTTCGCGGCATATCGTTACCTCCTTATGCATATTATAAATGGGTTATATACGTATACAGCAACTTTCATAAATTATAGATATGTAATTGCCTCCACATCGAATCACCTAGGATAAAGAACCGACTTCCTGCCGCGAATTTAGAGTTTTC ->chrXI_314675_315205_3:0:0_6:1:0_0 -ACCTTTGCCAACTTGTATTTTTCGATGATACTATAAAGTTCGGAAAGAAGAAGGAATTGTGTCAATATCACTGGGAGCCAAAAGCATTTGACCTCAGGCGTCATTGAAGCGTCATTAAGTATTATAAATTCGTATATAAGGGGAGCAACATAAGTGGTATTTTTTTTATATAATGGTGCTCCTTCTAAAAAATTCCTTAT ->chrXI_360709_361124_4:0:0_3:0:0_1 -CATGGCTTGTCTTTTTACTCGATTCCAACTTTTTTTCAAGCTTATCAAATTCCTTTAATGCTATTTCTTGCTCAGGATCCATGATCTGAATCACTTCTTTCACTTCATCCACATAGTGCTTCAACATGGACTCAATACCGTACTTCAAAGTCACTTCACAAGAAGAGGATGAGGTACATGCACCTTGAAATCTTAAATAA ->chrXI_389403_389898_4:0:0_6:0:0_8 -ATTGAGGTGTGAACTCACAATGAGATGCTACATTGACTATCAAAACCACTTTGTTACGCAGGGAGTTGCAGGGGAATGGATTTCCGTTTTCATCTATTGGTGAAAAAGAATAAAATTCTTGCATCGTTAGTTATAAATATTGTGTTTCTCCGCTTATATTCCTTATACGGGTTCACAATCAGAGAACCTCGCCGTGCACC ->chrXI_436806_437329_3:0:0_2:0:0_6 -CGATGAGGCTCTATCCAGCTGCTTATCTAAATCAACTTTAACGATGGATGATCTTATGACAGGGGGATCTTTCTTTAAAGTTCTTAGAATTACAGACTGTACCGCAGCTGATGAATCAAACAGCATTAAAAAGTGATATGCTCGAAAATGTTTTTCCTGGTCTTTCTTCATTATTTAAGGAAGATACCTTATGCCCATGG ->chrXI_445827_446391_1:0:0_7:0:0_9 -ATATCATATCCAACATATACACTATTGTTTTGCTGGGTTCTGCTTATCGTTTTCAATCATCTTCTTTTTTGATTTTATTTTCTCAAATGCGGGTATGAAAAATTTGTCGGTAAATTGTTGACCAGGTAAAATAGGTGCTATTTGCAATATGCTTCGTATTTGCTTCTCAGGGTCCTCGTCGACAGGGAACTTATTAAAAA ->chrXI_470772_471261_1:0:0_4:0:0_5 -TTTGGAGTTTAAACGTTGTTGCATTTTTGTATATTTTCGTATTTTTTTATTTATTTGAACCTGTATTTGTCGTTTAAATACTATTTATATACACATTGTTGATCCAATTCCTACAAAGTTATATTGTTTTAAAAAGATTTCACAATTCTTTGAATCGGAAATGACGAGTAACAGCTAACTTACATTTTAGGTATTAAGTT ->chrXI_609225_609808_8:1:0_2:0:0_2 -GAATGTAGAAGCCTTTCTGTCCACTGCGTTGAGGCAATTGCCGTTCATATCGAGCTTTGCATTTCTAGATAGGGAAACATCGTCTAATTGAGCAATCAATTGTTCGACTTGGCGGTTCGTAGCAGTGTATGGTGTTTCCACGTTTTCTGAAGAAGTTATTGAAAGACGTTTCTCATTTAACCCATCAAGACTTAAATCTT ->chrXI_628737_629238_4:0:0_5:1:0_a -CATCGAACTCTATTATTGGAGATTTATGCGATGACTACGATAAATTAAGCCTTTCTGAACTATTAGAATTATTCAATGAAGGCGAAGAATTACCAGAAATTTTGGGCTGTTGGGGAACATTGTGGTTTGCCACAATTTGCGAAAAGAATACGCATTCGATTAGTAGTGAAGATAAATTTCAAGAAATCGGTATACAAGAT ->chrXII_14440_14929_3:0:0_4:0:0_0 -CGATGTAACGCATCTCATCTCTTTTAAACATAAAAGTCATTTGTGTAATGTAGAGATTTACAAAGATTTTAAAAAAATAACAAAACTATCCAAAACTATCTATATTTGAATACTTCCTCCTATTTTTTTTTTTTTAACTATAATGAATGAATGCATGCCATATTGACTTACGTAACAAGGTGGCCTATTGGTAATATATT ->chrXII_79515_79982_3:0:0_9:0:0_e -ATGATCATGGAAGTAATGCATAACACCGTTATCGACATTATCTAAGTCCCACACATTGAGTGATTCTAGTGGGAAACTATCGTTGGAAAGGAACGGATGGAACAGAGCCATCCATGTATCATCTCCGGCAAATTTGACAGTCTTATTTGCCCAATGGAGCTGTTTAAGAAAGTTATCCTCTTCGATTACTGTTCCATCGA ->chrXII_179129_179604_4:0:0_3:0:0_c -TGAAGATTCAGGCGGGCCAATTGGGCCTGGACGATAATGACGTGCCGGGCCCATTGCCGGACACAGACAGCAAACCCTCATCACAATCACAAAATGACACAGCAATGTTTAAATTGTGCAACTTTGAAAGTCCTGTGCTCAAGGAGCTATCACGGCGAACGGTAAACAAGGAAATGGAGACGCAGAGAATTATGACAAAC ->chrXII_224837_225269_7:1:0_1:0:1_7 -ATGATTAGCAGAGATATACAAATATTTTAGTAAGAATACCATAAAGTATCTTTGCTTTCACAAATAGGAACAAGCACATAAATACAGTATAATAGACATGGCTGATCAAGAAAACTCTCCACTACATACAGTTGGTTTCGATGCTAGATTTCCCCAACAAAACCAAACAAAGCATTGTTTGCAATCTTATGTGGATTATC ->chrXII_329567_330050_4:0:0_5:0:0_3 -AAGAAGAAAAAAAATGAAGGACGAAAAGAAAAGGCTCGAAGAGCTTGCAAAGAAAAGGGAACTAACCGAGTCTGTCTCACCTCCAGTGTTTAAAAATGCATTTGCAAACATGTCAAGTAGCACAACGCCTATTATCGCCGCTTACGAAAAAACAAATCCAGCCATCACTCCAGCACCTAATGTAAAAGCCGCTCACCCCA ->chrXII_343172_343673_10:0:0_4:1:0_9 -CAATTTTACCACACCGCTACGGAAAAGGTCGACAAGGGTAATAAATGATGATTCGATGCCCCTAACAGGCGAAGTACTAGAGGAGAGGACAGCAGATGATCTCTATGGGATACATATGGACGTAGACGAAGTCGACTATCTGAATACATTGAGCCACATCGAGGAAGAAAAGCAATACGATTATTCAGCGTTTTGTGAGC ->chrXII_349489_350011_4:0:0_4:0:0_6 -AGAAAGAGTGAGGAAGATTTTGAGAACGAACTTTCAAATGAACACTTCTCGGCTGATCAAGAGGATGACAGTGAAATACAATCTTTAATTGAAAACATTGAGGATAATCCACCTGATGCAAGTGCTAGTTTGACACCGGAAAGATCGTTAGAAGAATCGCGTGAATTGTGGCATCAAAGTGACATTTCGACCGCCGAATT ->chrXII_394208_394614_2:0:0_5:0:0_b -CACTCCAATGAACAGTATCCGAAGGTTCGGCACTACATAGTTTCTTTTATTAAGACCAATAAATAAGCTTTTTTGTATGCACTTTTTATTCGCTCATGCATAATTGATATAGCTGACTGAATGTCAGTAGTAATATCTGCGAGAAAATATGACACTAATTCTTGAGGTTTGTTGATTTACGTAATATGGTCCTCGTATAG ->chrXII_625955_626443_7:0:0_4:0:0_11 -TGTTGTTAATTCTATCATTTCTTTGATCACTGACTGGAAGCCCATTAGCGGCCCAGTCCGGTTTAGGAATATCTTCAGGGACATACCTTCTTGGGGTAAGTGGATATGAAGCCTTGACTTTACCAGAATATTTGAATTTTGGGACAGGAACATAAGCACCTTCCAAGCCGTCCTAAGCATTGTGCAAAGCTTTGTGAGCT ->chrXII_662505_663100_5:0:0_6:0:0_1 -ACTGGACTGGAAGAGAATGGGTCACGAAAACGTCAATGCAAGGCAGTTAGCATTAAGAAGAGGCTATCCTGATCAGTTCAGAGAGCTCGTAGGTGAAGAAGTAAATGATTCCAACATGGATGCTTTAGCAGGCGGAAAGAAATTGAAAGTTGCAAGACCGCTTAGTGTACCTGGCTCACCAAGAGATTTGAGATCAAACA ->chrXII_804157_804654_4:0:0_5:0:0_2 -GTCTTCTGCACCTCCAAATCCTGATCTTGCATCTTCTGCGGCCCCTCCTATTCCCATTGTACCATCATCTGCAGCACCACCGCTTCCATTATCAGGTTCCTCTGCTCCAAAGGTACCGCAAAATAGACCGCATATGCCTTCAGTAAGGCCAGCACACAGAAGCCACCAAAGAAAAAGCTCTAATATTTCTCTTCCTAGTG ->chrXII_807598_808081_4:0:0_5:0:0_8 -AGCCAGTTTGGAACTGACGCAGTTCCGATAAGGATCGATGAGAAAGAAGGAACGTGGGATAGAATTCAAGATGATAATTCTTCTAATTTAAACTACCAAATTAACAACATTAATGACCCAGCTTCGAGTGGTAAATATACCCAGAGTATTGACTGTAACCATATAGCGGAGTCAAAATTTTGACAAAAAAATGGAAACAT ->chrXII_964131_964649_5:0:0_5:0:0_a -TCAGCGCATTTTACCCAATTTTCAAGGCTATGCAAGACGAGAACCTGGTATTAAATTTGCATGGGGAAAAACCTTCTGTCCAATATGGAGACAAAGAACCTATTCATGTATTGAATGCAGAGGAAGCCTTTTTGCCAGCCTAGAAACAATTGCATAATGATTTCCCAAACCTGAAAATAATTCTGGAACACTGCACTAGC ->chrXII_1019223_1019749_5:0:0_4:0:0_4 -CAGTTATGGTTACATTATTAAGGAATACAGAAGAGACTGCATGTGTACATAGGCATATCTATGGCGGAATTGAAAATGAATGTTGGTGGTCCAATGCAGTCCATATTTTTGAATTCTTCATCCATCGAAAAGGCGTAATTTATTTCTAAAGGAAGTTTAAGTTCTACCATAATGCTTTCACTGGTCTCCTCGAGCACCAC ->chrXII_1023125_1023595_6:0:0_7:0:0_d -TGGTTTCGATAACATTTTAGATTATGCATACAACAAAATCGGTTCACCACAGGCAGAAAGTTCTGCATACACGACCTACATGATGAGTTTAAAACATAAAAAGGCCAACGTGTTACATTTACTCTATGCAGTTATTAGTTTCCAGGTGTGTATGTTATTTTTCCTGATATGGTACTACTACATAAAGGGAAGGTTTATGA ->chrXII_1036541_1037023_5:0:0_5:0:0_10 -CTATTTCTTACAGTACCAACAGAATACATACGGATTCTTCTCCTTTAACGCTCTTAAGCTCGACGACAAACTTCGACCCTGTTCACTCAACAAACGTTATTACAGATGATCAACTTAAGTGCTTGCCAAAAAGCCTGGGCGACGTATATTTTTCAAGCAGCGATATTGCTGAGCTGTTTCAAGAATTTGCGACAAAATCT +>chrVI_18396_18897_3:0:0_4:0:0_0 +GCCTAAATTATACTTCATGCATTGGTTATAAAAAATCATGTTTTTTTACATCGGCTCTAAAAAGCGCAGAAGACTTAATCATAGTTTCATTGTACGTGTTATGCTCACTAGAGTATGTAAGGCCCTTTTCCGTTCCCACAACTTGAAATATTTATCCTGGGGGGGCGGCTGTAAAACGGTAAAATAATTCTCAAATAGGT +>chrVI_38233_38753_3:0:0_4:0:0_2 +TGTTAATACCGGTTTGCAGAACGTTAGAAAAGTTAGGACAAAAAAATGGAAAAAGTACTGGCAGTACAAGGCAGGTATTCCTATCGGTTTGAAACGGTCTCAATTGGATGAATTCAAAAATAAATATATGAAAGATGTGTTGGCGCAAACGAGTGTTCCTACAAATTTTCACGAAATAACGAATACGGATGAAACAATAA +>chrVI_118934_119464_5:0:0_3:0:0_1 +TTTTCAAGTTATCAAGCGTTATGTTTTGAAACATCTGTTCCGTTTTCAGTTTTTCAAAAAGATCGATATTCTCTTGAGAATTAGGAAGTTCTACGCTCAACCTCCCGTGGGCAGAAGAAAAACAAAAGCTACTACAATTGTGTTAGAATACAGTTCTAATATTATCAAATAAGTAGTATTCATGTTACTAGTATATTATC +>chrVI_184780_185293_1:1:0_8:0:0_3 +AATTTGGCCGCCTATCCAGCAGTGGAGTTTCCTTCTGACAGTGTTAAACGTTTTACCACAACTGAAACATTCTTTAGAACTCTCGTCCTTGATCCAATATTCCTTTGAGAGGACACCATTGTTACTGGTCATGTCCTTCTTGCGGTTGTTATAAAATGCGAACAGGAAACTCTTGGACAGGTATGCGGTCAAGGAAGAAG +>chrV_124419_124957_4:0:0_4:0:0_5 +TTAGTGTCATACTACATCAAGTTCATCCGCTACGACCTGAACATCGAGTTGGACCCGAAGACTTTCAATCTCACGAAATTCTTGAATTCTTTGGCAATCTTCAAAACTTGTAATAATAAAAACATAGATTTCCATTCTTTTCGATGTGTTAACCAACTATGGACACAACTCTGTACAGTGAACCTTTCCCTTGGTATGGT +>chrV_151218_151704_3:0:0_8:0:0_2 +TGAATTTACTTCATTTGTTAAGGTTAACAATTTAAGGTGTTGAATCTTTCAAATTCTGTTCTCGCCATTCCATGACAGAAACATTACGAAGTGCTAGGAGGTATATTATTAATAAGATAGTTTTTAGTTTATAATATTTGTCAACTCTAGTTGTTTACGCATAGAAAATAAGTACGTTGTAATCAATATCATGAATATTT +>chrV_234738_235208_3:0:0_5:0:0_3 +GAGTTAACGGGCACAGCGTCAAAAAATCCGCCACCACAGTTGATCGCGCCGAAAACGATGGAGTTGCGATGAGTAAAATGAAGGGCATATATAAACAAGAGTAGACAGAGACACATTTTTCAATAACATATATATAGATTTAATTGGAAAGACAGTTATATTCTAACGTCCAAAACTTAACAAGTAAATCAAGTTGCAAT +>chrV_278567_279041_6:0:0_2:0:0_6 +GCGATGCATTCAATTTTATTCGGTTAGGCATGCAAGACATCAGTGTCGCCGGTGCAAGTGAAACGAGTTTGCATCCGTTAAGTTTAGCAGGTTTCATCAGAGCAAAGTCGATTACTACAAACGGGATCTCTAGACGCTTTGATACACAACGTTCTGGATTCGTACTTGGTGAAGGATGCGGAATGATTGTCATGGAATCG +>chrV_436297_436806_7:0:0_5:0:0_7 +TTCGCAGGCAAATATGCATTTCTTATTCCAACACTAATGATTCCTGCCATAGATTGATGATTTTCGTAAAACTAGCATGTAGAACAAAAATACTCAAATGAAATTCAAGATCAAAAAAGACTCTCCTGCGTTCAGCGGTCTTTCGAGCGAATAGTAGGATTTCAGCGCCTCGCTTGATAGACGATAGTTGGTTTTTATTC +>chrV_479347_479873_3:0:0_3:0:0_4 +ACCGTAGTTGTAGTAGTAAAGCTTTTATAAGTGTTGAAGAATGTTTCTGTGAAAATCTCATTGTCGATAGTTAGTTTAACGAATGCATAATCTAGTAGTCCTATGTTATCATGGGAAAGCCCTCTGGTAGAATGACCCCTTTGTCTTTGATGATAGTAATAATTCTCAAGGTCTTTAGTGTCTACCAATTTTGAAAAGAT +>chrV_482784_483296_3:1:0_7:0:0_0 +GCTTGAACTAGCACTGGCCGTTGAAGATTTCCTGTTCTTAGACCAGAGAAGACCTTTCATTAGACTCCTGCTTCGTTAATTGTTTTTTTTGTGTCTATCCAGAAAAGGCACGATGACCGTGTGTTCTATTAAACTGAAACGTTTGCTTGTTTGTTCTGTTGGAAAAAATGGGACTGATCTGCAGTCTCCTAACCAAAGAG +>chrV_498912_499362_2:1:0_5:0:0_8 +CGTAAGAAGGGCATACGCTAAGGAATATTGATATATGTTTTGATATATGGACGTGAAATGACTAATGAAGTCGTAGAGAGTTTGGGAACTGTTTCGAGGCACTGTTTCACTTCTAACATTCATTTTCATCCCCTTTGTAATAGCGTTTTCCATTTATCCAGTTTGCCTTTCCGATTTTCAAACGTACAGTGATGAAATGC +>chrV_573344_573800_1:0:0_1:0:0_1 +GCGGAAGACGTAGTGGCAGGTGAGGCGGCGAGTTCAGATCATCATCAAAAAATTTCCAGAGTAACGCGAAAAAGGCCCCGAGAGCCCAAGAGTACAAACGATATCCTCGTCGCAGGCCAGAAACTCTTTGGCAGCTCCTTTGAATTCAGGGACTTGCATCAGTTGCGCTTATGTCATGAAATATACATGGCAGACACACC >chrXIII_88166_88586_6:0:0_6:0:0_a TTAAATTTGGCACAAAAACATTGCTAAATTTTGGATTATTGATTCTCAATTGGGTTAGGTTCCTACCAGGAATCTTTGAAATCCTCAAATTTACGATATTTTTTAGTTCAATTGAATCAGGGCATACCTCTACGCACTTTTCAATAATATGTTTGTTAATAGCTCGTTTAATTATCAATTCTTTATAAGTGTCATAATCA >chrXIII_93863_94369_5:0:0_3:0:0_7 @@ -300,6 +218,42 @@ TATATTCATATTGCGGATCCAACTTCTATGTTTCCGGAAAGCACTAATGTTGATATTGAGGTTATAAGTACAGATATCCTAAATGTTGCCTTGAAAAGATCATTTACCACATATTTACCAGATACGGTTTTTCCTATGTTACCTCAATCTATTTGTCACTTATCAGATTTGGGGAAACAAGGACAAAGGACGACAACTAT >chrXIII_875476_876017_4:1:0_2:0:0_e CGCTTTGGTTCTTATACGAAGGGAGCTTGAACATAACAGGGTATGTGCGCATATTGAAGGATCCTACTGGTGTCTTGTGGCATAATTTCCTGAAATATGACTCGAAGAAAGTCACGGGCTATGTTGGCTTCCGAAATCAGGGTGCCACATGCTATTTGAATTCGTTATTGCAATCTTACTTCTTTACAAAATACTTCAGA +>chrXII_14440_14929_3:0:0_4:0:0_0 +CGATGTAACGCATCTCATCTCTTTTAAACATAAAAGTCATTTGTGTAATGTAGAGATTTACAAAGATTTTAAAAAAATAACAAAACTATCCAAAACTATCTATATTTGAATACTTCCTCCTATTTTTTTTTTTTTAACTATAATGAATGAATGCATGCCATATTGACTTACGTAACAAGGTGGCCTATTGGTAATATATT +>chrXII_79515_79982_3:0:0_9:0:0_e +ATGATCATGGAAGTAATGCATAACACCGTTATCGACATTATCTAAGTCCCACACATTGAGTGATTCTAGTGGGAAACTATCGTTGGAAAGGAACGGATGGAACAGAGCCATCCATGTATCATCTCCGGCAAATTTGACAGTCTTATTTGCCCAATGGAGCTGTTTAAGAAAGTTATCCTCTTCGATTACTGTTCCATCGA +>chrXII_179129_179604_4:0:0_3:0:0_c +TGAAGATTCAGGCGGGCCAATTGGGCCTGGACGATAATGACGTGCCGGGCCCATTGCCGGACACAGACAGCAAACCCTCATCACAATCACAAAATGACACAGCAATGTTTAAATTGTGCAACTTTGAAAGTCCTGTGCTCAAGGAGCTATCACGGCGAACGGTAAACAAGGAAATGGAGACGCAGAGAATTATGACAAAC +>chrXII_219746_220211_0:0:0_2:0:0_f +TATATTCGCCAGATAGACCTCTCATAATTAATTGGCATGCGACCTTGTTATTGATATGAATGCCATTATTGTTCAGTCTGTCGATAATGTTTGTGACTTTTGTTTCAAATGCATCTGCAGGTGTACTGCCATTATATTGCAAATTTGCCAGGGTCACAATGTCGTTTGCCTCTTGGGTATCAGATTGCATTTTTTCAATA +>chrXII_224837_225269_7:1:0_1:0:1_7 +ATGATTAGCAGAGATATACAAATATTTTAGTAAGAATACCATAAAGTATCTTTGCTTTCACAAATAGGAACAAGCACATAAATACAGTATAATAGACATGGCTGATCAAGAAAACTCTCCACTACATACAGTTGGTTTCGATGCTAGATTTCCCCAACAAAACCAAACAAAGCATTGTTTGCAATCTTATGTGGATTATC +>chrXII_329567_330050_4:0:0_5:0:0_3 +AAGAAGAAAAAAAATGAAGGACGAAAAGAAAAGGCTCGAAGAGCTTGCAAAGAAAAGGGAACTAACCGAGTCTGTCTCACCTCCAGTGTTTAAAAATGCATTTGCAAACATGTCAAGTAGCACAACGCCTATTATCGCCGCTTACGAAAAAACAAATCCAGCCATCACTCCAGCACCTAATGTAAAAGCCGCTCACCCCA +>chrXII_343172_343673_10:0:0_4:1:0_9 +CAATTTTACCACACCGCTACGGAAAAGGTCGACAAGGGTAATAAATGATGATTCGATGCCCCTAACAGGCGAAGTACTAGAGGAGAGGACAGCAGATGATCTCTATGGGATACATATGGACGTAGACGAAGTCGACTATCTGAATACATTGAGCCACATCGAGGAAGAAAAGCAATACGATTATTCAGCGTTTTGTGAGC +>chrXII_349489_350011_4:0:0_4:0:0_6 +AGAAAGAGTGAGGAAGATTTTGAGAACGAACTTTCAAATGAACACTTCTCGGCTGATCAAGAGGATGACAGTGAAATACAATCTTTAATTGAAAACATTGAGGATAATCCACCTGATGCAAGTGCTAGTTTGACACCGGAAAGATCGTTAGAAGAATCGCGTGAATTGTGGCATCAAAGTGACATTTCGACCGCCGAATT +>chrXII_394208_394614_2:0:0_5:0:0_b +CACTCCAATGAACAGTATCCGAAGGTTCGGCACTACATAGTTTCTTTTATTAAGACCAATAAATAAGCTTTTTTGTATGCACTTTTTATTCGCTCATGCATAATTGATATAGCTGACTGAATGTCAGTAGTAATATCTGCGAGAAAATATGACACTAATTCTTGAGGTTTGTTGATTTACGTAATATGGTCCTCGTATAG +>chrXII_625955_626443_7:0:0_4:0:0_11 +TGTTGTTAATTCTATCATTTCTTTGATCACTGACTGGAAGCCCATTAGCGGCCCAGTCCGGTTTAGGAATATCTTCAGGGACATACCTTCTTGGGGTAAGTGGATATGAAGCCTTGACTTTACCAGAATATTTGAATTTTGGGACAGGAACATAAGCACCTTCCAAGCCGTCCTAAGCATTGTGCAAAGCTTTGTGAGCT +>chrXII_662505_663100_5:0:0_6:0:0_1 +ACTGGACTGGAAGAGAATGGGTCACGAAAACGTCAATGCAAGGCAGTTAGCATTAAGAAGAGGCTATCCTGATCAGTTCAGAGAGCTCGTAGGTGAAGAAGTAAATGATTCCAACATGGATGCTTTAGCAGGCGGAAAGAAATTGAAAGTTGCAAGACCGCTTAGTGTACCTGGCTCACCAAGAGATTTGAGATCAAACA +>chrXII_804157_804654_4:0:0_5:0:0_2 +GTCTTCTGCACCTCCAAATCCTGATCTTGCATCTTCTGCGGCCCCTCCTATTCCCATTGTACCATCATCTGCAGCACCACCGCTTCCATTATCAGGTTCCTCTGCTCCAAAGGTACCGCAAAATAGACCGCATATGCCTTCAGTAAGGCCAGCACACAGAAGCCACCAAAGAAAAAGCTCTAATATTTCTCTTCCTAGTG +>chrXII_807598_808081_4:0:0_5:0:0_8 +AGCCAGTTTGGAACTGACGCAGTTCCGATAAGGATCGATGAGAAAGAAGGAACGTGGGATAGAATTCAAGATGATAATTCTTCTAATTTAAACTACCAAATTAACAACATTAATGACCCAGCTTCGAGTGGTAAATATACCCAGAGTATTGACTGTAACCATATAGCGGAGTCAAAATTTTGACAAAAAAATGGAAACAT +>chrXII_964131_964649_5:0:0_5:0:0_a +TCAGCGCATTTTACCCAATTTTCAAGGCTATGCAAGACGAGAACCTGGTATTAAATTTGCATGGGGAAAAACCTTCTGTCCAATATGGAGACAAAGAACCTATTCATGTATTGAATGCAGAGGAAGCCTTTTTGCCAGCCTAGAAACAATTGCATAATGATTTCCCAAACCTGAAAATAATTCTGGAACACTGCACTAGC +>chrXII_1019223_1019749_5:0:0_4:0:0_4 +CAGTTATGGTTACATTATTAAGGAATACAGAAGAGACTGCATGTGTACATAGGCATATCTATGGCGGAATTGAAAATGAATGTTGGTGGTCCAATGCAGTCCATATTTTTGAATTCTTCATCCATCGAAAAGGCGTAATTTATTTCTAAAGGAAGTTTAAGTTCTACCATAATGCTTTCACTGGTCTCCTCGAGCACCAC +>chrXII_1023125_1023595_6:0:0_7:0:0_d +TGGTTTCGATAACATTTTAGATTATGCATACAACAAAATCGGTTCACCACAGGCAGAAAGTTCTGCATACACGACCTACATGATGAGTTTAAAACATAAAAAGGCCAACGTGTTACATTTACTCTATGCAGTTATTAGTTTCCAGGTGTGTATGTTATTTTTCCTGATATGGTACTACTACATAAAGGGAAGGTTTATGA +>chrXII_1036541_1037023_5:0:0_5:0:0_10 +CTATTTCTTACAGTACCAACAGAATACATACGGATTCTTCTCCTTTAACGCTCTTAAGCTCGACGACAAACTTCGACCCTGTTCACTCAACAAACGTTATTACAGATGATCAACTTAAGTGCTTGCCAAAAAGCCTGGGCGACGTATATTTTTCAAGCAGCGATATTGCTGAGCTGTTTCAAGAATTTGCGACAAAATCT +>chrXII_1065644_1066121_6:0:0_4:0:0_5 +ATTGAAAACGAAAGTACGTACCGACTCCTTTATTTTTGCAGGCCGGAAATCAAGCGATGAATGAGACATCCTTCTGTTTTCTATGTTGTGCTTGAAGGGTACAGACAGTCGCTTATCTTAGTGAGATTTTGTTTGCTTTTGCTGCACCTGCATAGCGCAGATTGTGCATCTTCTCAATAGCATAAATATTCCATTCTTAG >chrXIV_19790_20275_3:0:0_6:0:0_0 TGAGCAGAGAGCATAAAAATCTGCCCCGGTGTAATTAAATGGACATAGCTTTGGCAACTCAATAAGCTTTACGTCGTTGTCGAGCACGAATTTGCGAGTCAGAGCCTCTAAAATATTCAATTGTTTGGTATCCGTATCCGGAATGCCTAAATATAACAATTTATCGAATCGTCCTGGTCTTAGTAGTGCTTCGTCCCATC >chrXIV_22782_23237_1:0:0_5:0:0_2 @@ -326,6 +280,60 @@ GACAATCAAATATTGGGATCATAAACACACATAATCGCCATATGCGTTAATTCGGGTTTCAATCACTTCGTTTGTCTATGGTATCGCAGCCTAGTGAATATTTAATTGTTTCAATAAAAAAGGCTTAAAATCCCCATGAAAATCACAAGAGGAATCTTTCAACAAGAACAATAGTATACAATCCATGAATGAAGGAGTTC >chrXIV_758471_759074_4:0:0_2:0:0_3 GAAGAATAGGAAGGCATTTGAGTTACCCGTGGATCGATTGTACGTTTTGAAACAGAAGTCAATAAAGTTCCATTTAATTTTGTCCCCGAAATAGATAAAGATGAAGAAAATAAAGTCGAAGTCGACGTCGAAGCAGTTTGAGATAATAATGTGGTGACTTTACGCATTGTTGATGCACTTGGCATGACTGAGGCGACGCC +>chrXI_27284_27774_3:1:0_7:0:0_3 +ATGCATCTGAATCCCTAAAAAAAATGCTTGCAAAAATGGTTGAACATTTTGGGACAACGAAGTTTTCTTGCGAAGATCGCTAAGATGATTGAAGCTTAATTAAACTACAAGTTATCATAAGACCTGAAAAAGAGGAGTATATTTTTAATTTCGATGGCACTTCACCCCAAGTTTATGGTAATTTAAATGCACCAGATGCT +>chrXI_226703_227185_4:0:0_7:0:0_4 +GTGAATGGGAACAATGACGATGATGCTGATGCCAACAACATTTTTAAACAGCAAGGTGTTACTATCAAGAACGACACTGAAGATGATTCGATAAATAAGGCCTCTAATGACCGGGGATTGGAGGACGAGAGCGGTCCTACTCATGGTAATGACAGCGGTAACCACCGTCACAACGAGGAGTATGACGTCCATAGCCAAAT +>chrXI_302795_303272_10:0:0_6:0:0_7 +TACTGATAGTCTATCTTAATCATTATTTCTTGTTTCAATCTGGAATTTGATTTTCGCGGCATATCGTTACCTCCTTATGCATATTATAAATGGGTTATATACGTATACAGCAACTTTCATAAATTATAGATATGTAATTGCCTCCACATCGAATCACCTAGGATAAAGAACCGACTTCCTGCCGCGAATTTAGAGTTTTC +>chrXI_314675_315205_3:0:0_6:1:0_0 +ACCTTTGCCAACTTGTATTTTTCGATGATACTATAAAGTTCGGAAAGAAGAAGGAATTGTGTCAATATCACTGGGAGCCAAAAGCATTTGACCTCAGGCGTCATTGAAGCGTCATTAAGTATTATAAATTCGTATATAAGGGGAGCAACATAAGTGGTATTTTTTTTATATAATGGTGCTCCTTCTAAAAAATTCCTTAT +>chrXI_360709_361124_4:0:0_3:0:0_1 +CATGGCTTGTCTTTTTACTCGATTCCAACTTTTTTTCAAGCTTATCAAATTCCTTTAATGCTATTTCTTGCTCAGGATCCATGATCTGAATCACTTCTTTCACTTCATCCACATAGTGCTTCAACATGGACTCAATACCGTACTTCAAAGTCACTTCACAAGAAGAGGATGAGGTACATGCACCTTGAAATCTTAAATAA +>chrXI_389403_389898_4:0:0_6:0:0_8 +ATTGAGGTGTGAACTCACAATGAGATGCTACATTGACTATCAAAACCACTTTGTTACGCAGGGAGTTGCAGGGGAATGGATTTCCGTTTTCATCTATTGGTGAAAAAGAATAAAATTCTTGCATCGTTAGTTATAAATATTGTGTTTCTCCGCTTATATTCCTTATACGGGTTCACAATCAGAGAACCTCGCCGTGCACC +>chrXI_436806_437329_3:0:0_2:0:0_6 +CGATGAGGCTCTATCCAGCTGCTTATCTAAATCAACTTTAACGATGGATGATCTTATGACAGGGGGATCTTTCTTTAAAGTTCTTAGAATTACAGACTGTACCGCAGCTGATGAATCAAACAGCATTAAAAAGTGATATGCTCGAAAATGTTTTTCCTGGTCTTTCTTCATTATTTAAGGAAGATACCTTATGCCCATGG +>chrXI_445827_446391_1:0:0_7:0:0_9 +ATATCATATCCAACATATACACTATTGTTTTGCTGGGTTCTGCTTATCGTTTTCAATCATCTTCTTTTTTGATTTTATTTTCTCAAATGCGGGTATGAAAAATTTGTCGGTAAATTGTTGACCAGGTAAAATAGGTGCTATTTGCAATATGCTTCGTATTTGCTTCTCAGGGTCCTCGTCGACAGGGAACTTATTAAAAA +>chrXI_470772_471261_1:0:0_4:0:0_5 +TTTGGAGTTTAAACGTTGTTGCATTTTTGTATATTTTCGTATTTTTTTATTTATTTGAACCTGTATTTGTCGTTTAAATACTATTTATATACACATTGTTGATCCAATTCCTACAAAGTTATATTGTTTTAAAAAGATTTCACAATTCTTTGAATCGGAAATGACGAGTAACAGCTAACTTACATTTTAGGTATTAAGTT +>chrXI_609225_609808_8:1:0_2:0:0_2 +GAATGTAGAAGCCTTTCTGTCCACTGCGTTGAGGCAATTGCCGTTCATATCGAGCTTTGCATTTCTAGATAGGGAAACATCGTCTAATTGAGCAATCAATTGTTCGACTTGGCGGTTCGTAGCAGTGTATGGTGTTTCCACGTTTTCTGAAGAAGTTATTGAAAGACGTTTCTCATTTAACCCATCAAGACTTAAATCTT +>chrXI_628737_629238_4:0:0_5:1:0_a +CATCGAACTCTATTATTGGAGATTTATGCGATGACTACGATAAATTAAGCCTTTCTGAACTATTAGAATTATTCAATGAAGGCGAAGAATTACCAGAAATTTTGGGCTGTTGGGGAACATTGTGGTTTGCCACAATTTGCGAAAAGAATACGCATTCGATTAGTAGTGAAGATAAATTTCAAGAAATCGGTATACAAGAT +>chrXVI_47666_48026_6:0:0_6:1:0_f +CTAGACGACCACATTCCATTGGTTGTTATGCAAACGGGTTCCGGTACCCAGTCTAACATGAATGGTAATGAAGTTCTTTCCAATCGTGCCATTGAGATCCTAGGAGGCAAGCTTGGATCTAAACAAGTCCATCCAAACAATCATTGCAACCAATCTCAATCATCCAATGATACTTTCCCCACTGTCATGCATATCGCTGC +>chrXVI_174529_175059_1:1:0_2:0:0_2 +TCATCACTGTTGGTGCACACTTCAAGCAAGCTAACAACTTTTTGTGGCCATTCAAGTTGTCCAACCCATCTGGTGGTTGGGGTGTCCCAAGAAAGTTCAAGCATTTCCTCCAAGGTGGTTCTTTCGGTAACCGTGAAGAATTCATCAATAAATTGGTTAAGGCTATGAACTAACATTATTCCGTGTGGCAATAATCTCAA +>chrXVI_216257_216697_2:0:0_4:0:0_8 +ATTCCAGTTGCGATCATTTCATCTCGAGGAGTGATGACTAGAGAACATCCGATCTACACAGTAGAAGACAAATTCGATTTCATCAAAGATAAACTAAGAGACAAAAAGAAGGGAGAGGTACTTTCTGAGATAATGCTATATCTTGTCGAAAAATCACTCGATCTCATTGACGATCCATTCATCCCATTCAGCATATCGAA +>chrXVI_286197_286773_3:0:0_1:0:0_3 +AATTCTCGCAAACACGTCACAAGAAACACATTAATGCAAAATGTGGCACAGTCAAAAAACTGCGAAAATGTGTAAAAGATGAAAAGAACCGTGATCAGCACCAGCAGTGTACCAGATTTTGTGATCTGATTTATTATAGATTTACTCGATGACCTGAACTTGAATTATATTTAAATCGATGAAGGGGTTGAAACAGGTGT +>chrXVI_289557_289973_4:0:0_3:0:0_d +AACATTAAAAACAAATTTTTAGAAAAACAAAAGCTGAATTAAAGACTAAATATTACACAATTTCTTCATACATTTCCGCCCCAAAGTCAAACAGCCTAAATAATATAAAAATTAACTTTTGGCAGCTCCAACCTCTGTACTGCCATCTAAAACTTTTCCAGTAAACGGCTTATATACAGTTAACAACCCGTCACTATCAA +>chrXVI_389175_389686_2:0:0_4:0:0_6 +TACCAACCGGTTGTGAGGTATATTGCACCTGATAAGATTGTTGATAGTTGGGTGCGTATCTAGAGGCGTGTTCATTCTGGTTTGGTGTATACGAACTAATAGAGCTTGTATGGCCTCTATGGGTCTTTACAAAATTGGGGGTATTTACGGCCGAAGCGGCAAGGTTTTGCACAACTGATGGATATTGCTTCTGCTGAACT +>chrXVI_401813_402387_4:0:0_6:0:0_1 +TATTGACTCTACTGATAGCATTCTTATCAATAAAGGATGATTCTACTAAAAACTGGTTAAACGGCAAGGTATTCCGTCTAGTTTTTCAGAATATTTTACTGGAGCAAAACCCGGAACTATTGGAACTGTCTTTAGATGTTTATGTTGCGTTATTGGAGCATTATAAAGTTAAGCATACCTAAAAAACTTTAGATCATGTT +>chrXVI_680224_680728_0:0:0_3:0:0_7 +GAGGAATGTTTTGGTTTGGTATATGAGGAATGTGATGATGCGTAGGGGTAGTTGTGGACAATCGATTGTTCCTGGTGTGAGACAGTGGTTTGACAATATAAGTTGTTCCCATCTGCTTTAGCTGCTGGTACTGATCCAGTTGAAAATCTTGCAGAGAAGGTAATAGAGGGGGAGGAAAATATTGATTTGAATTGTTGATA +>chrXVI_693308_693805_2:0:0_2:0:0_c +CTAAGTTGCCAACTTACACCGCCAAGGACTCTGCCGTGGCCACTAGAAAATTATCAGAAACTGTTCTTGAGGATGTTTACAATCAATTGCCAGAGTTGATTGGTGGTTCTGCCGATTTAACACCTTCTAACTTGACCAGATGGAAGGAAGGCCTTGACTACCAACCTCCTTCTTCCGGTTCAGGTAACTACTCTGGTAGA +>chrXVI_752128_752641_3:0:0_2:0:0_5 +TCTCGAGTATTTTTCACTTTTAGTATATAAGTAAAACATAAAAAACATGAGAGGTGGTATGGTTTATTTGCCGTCACTGTGGAGCCTTCAAGTAATGTAAATAAGAGGGAAAGTGTGATAGTACAAGATGAGTTCGAATTCAACACCAGAAAATGTTACTGCAGCACACGTTCTGTGGTATATTCCCAATAAGATCGGTT +>chrXVI_763341_763881_3:0:0_5:0:0_4 +AAGCTGCCAGCACCATGCGCGCTTCATACTGTTTATGTTCCTTTTGTCAGCTCTGCCCAAAGAAGCCCCTATAATTACGCCAATACAATATATGGTTTGCACATCATTCGTACAATTAATTCAGTCAAAACATATTTCAATATTAGGTCAATGGTTACATCTTCTTCATCTGCCAGAATAACATGGGGGAAATCTCTGCA +>chrXVI_766516_767017_5:0:0_7:0:0_b +TTACTTCCTTACAATGTTTCAACCAGCAAGAAAATCCCGTTTACCCTGAATTGCTGGCCCCCTTTTATGAAAATTCATCCTATAATAAGAACGCGCCAATGGTAGAAATATTTTGGATCCTGGGGCCATCAGTTGGAGGTATTTCAGATCTGGAAGATTTGATTGTTTCTCTACATCCATTGATTTTCAAGATGGATCAC +>chrXVI_866925_867424_2:1:0_4:0:0_e +ACAGTTCGCTCTGAAATCTCCCCCTGGGTTTCCCAATGGAATGAAACGTTGGAAAAAGAACTATCCGACCCTCGATCTAATTTGACTAGACATATTAGGATGAATTTCGAAACCTTTAGGTCATTACCTACATTGAAAAATAGCATAATTCCATTAGTAGCGACATCCAAAAATTTTGGTTCACTGTGCACTGCCATAAA +>chrXVI_889501_889988_11:0:0_5:0:0_0 +TGGAATTTATTTCGTCCAGAATAGTATATTCCTTCCACAAGAACCATGCAACCTGGGACGTAGTAATGTCGTTGTGTAGGGATAGTTTGGGAAATGTCAATTTCGACAGATCCAGACGGATCTTCCAGTGACCAATTGCCCTTAAAGTTCTTATTTAAGAGCCCCAATAGTAGAAAGTTTTGAGCATCCCTACCTAGTAG +>chrXVI_908795_909263_5:0:0_2:0:0_a +ATTTCGCCTGAGCTTGAAAGGGCGCAGTAGTTGGTTTAGAGTAATGGTATGGTTGTCTGATAGGTATCCTACTTTTTATGAAAGAACTTGAAATGCTATCAATTGATCTTGGAGATATTGAACTTTTGAATTTTGTAGGACTGTTTCCCATTTGGTTGAGCAAACGGTCATTCTCGTCATCATCATCTTCTTCTACTCCT +>chrXVI_912895_913350_7:0:0_5:0:0_9 +ATAACCATTTAGCGTGGAAAGGACTTTTTCTCTTATTTAGAACCACTGAGGTTGTCCCAGACATACTTTCGTATGATGAATATTTTGACCTGTGTGGCCAATATGCAGACGCACTTTAAAAGCCGGAACAGTCTCAAGTAGAACTAATAAATGACAAAAAATTACTACAGCAAACGCATCCATATTGTCAAAAAGCCTTT >chrXV_176307_176892_1:0:0_8:0:0_0 TGCTACGAGATCATTATCTATGCTAGCCAGGTCCAAGGGTAACGAATATTTGATTCGCACTTTGCAACCATTACTAAAAAAAATTATCCAGAACAGAGATTTATTTGAAATTGAGAAACTAAAACCGGAAGATTCAGATGCTGAACGTCAAATAGAGCTCTTCGTTAAATACATGAATGAATTATTGGAATCCATATCCA >chrXV_178018_178568_1:0:0_3:0:0_6 @@ -362,35 +370,27 @@ CAAACAAAAACACCCAAAATTACATTACTTAGAATGACCCTCAAGAGCAGGGTGCAATTTATCAAGCGATCATTGAACTAACTAAGTTCATATCCTGTATAGGCTTTAAAACAATGCACCCTAAGTTCAAATGCACCCCCCCTCGCCCCGCAGCGGACCCTTGAACAGAGAACTGTTTCGAGGTTCACCCAATTGGATCA >chrXV_1059215_1059682_4:0:0_3:0:0_c CGATCATAGAACTAACTAAGTTCATATCCTGTATAGGATTTAAAACAATGCACCGTAAGTTCAAATGCACCCCCCCTCGGCCCGCAGCGGACCCTTGAACAGAGAACTGTTTCGAGGTTCACCCAATTGGATCACTTGTATAATTTGTAATCGAGTTCGGATAAGATGTATACGAATCTAACTGTGTGCAGTATAATTAG ->chrXVI_47666_48026_6:0:0_6:1:0_f -CTAGACGACCACATTCCATTGGTTGTTATGCAAACGGGTTCCGGTACCCAGTCTAACATGAATGGTAATGAAGTTCTTTCCAATCGTGCCATTGAGATCCTAGGAGGCAAGCTTGGATCTAAACAAGTCCATCCAAACAATCATTGCAACCAATCTCAATCATCCAATGATACTTTCCCCACTGTCATGCATATCGCTGC ->chrXVI_174529_175059_1:1:0_2:0:0_2 -TCATCACTGTTGGTGCACACTTCAAGCAAGCTAACAACTTTTTGTGGCCATTCAAGTTGTCCAACCCATCTGGTGGTTGGGGTGTCCCAAGAAAGTTCAAGCATTTCCTCCAAGGTGGTTCTTTCGGTAACCGTGAAGAATTCATCAATAAATTGGTTAAGGCTATGAACTAACATTATTCCGTGTGGCAATAATCTCAA ->chrXVI_216257_216697_2:0:0_4:0:0_8 -ATTCCAGTTGCGATCATTTCATCTCGAGGAGTGATGACTAGAGAACATCCGATCTACACAGTAGAAGACAAATTCGATTTCATCAAAGATAAACTAAGAGACAAAAAGAAGGGAGAGGTACTTTCTGAGATAATGCTATATCTTGTCGAAAAATCACTCGATCTCATTGACGATCCATTCATCCCATTCAGCATATCGAA ->chrXVI_286197_286773_3:0:0_1:0:0_3 -AATTCTCGCAAACACGTCACAAGAAACACATTAATGCAAAATGTGGCACAGTCAAAAAACTGCGAAAATGTGTAAAAGATGAAAAGAACCGTGATCAGCACCAGCAGTGTACCAGATTTTGTGATCTGATTTATTATAGATTTACTCGATGACCTGAACTTGAATTATATTTAAATCGATGAAGGGGTTGAAACAGGTGT ->chrXVI_289557_289973_4:0:0_3:0:0_d -AACATTAAAAACAAATTTTTAGAAAAACAAAAGCTGAATTAAAGACTAAATATTACACAATTTCTTCATACATTTCCGCCCCAAAGTCAAACAGCCTAAATAATATAAAAATTAACTTTTGGCAGCTCCAACCTCTGTACTGCCATCTAAAACTTTTCCAGTAAACGGCTTATATACAGTTAACAACCCGTCACTATCAA ->chrXVI_389175_389686_2:0:0_4:0:0_6 -TACCAACCGGTTGTGAGGTATATTGCACCTGATAAGATTGTTGATAGTTGGGTGCGTATCTAGAGGCGTGTTCATTCTGGTTTGGTGTATACGAACTAATAGAGCTTGTATGGCCTCTATGGGTCTTTACAAAATTGGGGGTATTTACGGCCGAAGCGGCAAGGTTTTGCACAACTGATGGATATTGCTTCTGCTGAACT ->chrXVI_401813_402387_4:0:0_6:0:0_1 -TATTGACTCTACTGATAGCATTCTTATCAATAAAGGATGATTCTACTAAAAACTGGTTAAACGGCAAGGTATTCCGTCTAGTTTTTCAGAATATTTTACTGGAGCAAAACCCGGAACTATTGGAACTGTCTTTAGATGTTTATGTTGCGTTATTGGAGCATTATAAAGTTAAGCATACCTAAAAAACTTTAGATCATGTT ->chrXVI_680224_680728_0:0:0_3:0:0_7 -GAGGAATGTTTTGGTTTGGTATATGAGGAATGTGATGATGCGTAGGGGTAGTTGTGGACAATCGATTGTTCCTGGTGTGAGACAGTGGTTTGACAATATAAGTTGTTCCCATCTGCTTTAGCTGCTGGTACTGATCCAGTTGAAAATCTTGCAGAGAAGGTAATAGAGGGGGAGGAAAATATTGATTTGAATTGTTGATA ->chrXVI_693308_693805_2:0:0_2:0:0_c -CTAAGTTGCCAACTTACACCGCCAAGGACTCTGCCGTGGCCACTAGAAAATTATCAGAAACTGTTCTTGAGGATGTTTACAATCAATTGCCAGAGTTGATTGGTGGTTCTGCCGATTTAACACCTTCTAACTTGACCAGATGGAAGGAAGGCCTTGACTACCAACCTCCTTCTTCCGGTTCAGGTAACTACTCTGGTAGA ->chrXVI_752128_752641_3:0:0_2:0:0_5 -TCTCGAGTATTTTTCACTTTTAGTATATAAGTAAAACATAAAAAACATGAGAGGTGGTATGGTTTATTTGCCGTCACTGTGGAGCCTTCAAGTAATGTAAATAAGAGGGAAAGTGTGATAGTACAAGATGAGTTCGAATTCAACACCAGAAAATGTTACTGCAGCACACGTTCTGTGGTATATTCCCAATAAGATCGGTT ->chrXVI_763341_763881_3:0:0_5:0:0_4 -AAGCTGCCAGCACCATGCGCGCTTCATACTGTTTATGTTCCTTTTGTCAGCTCTGCCCAAAGAAGCCCCTATAATTACGCCAATACAATATATGGTTTGCACATCATTCGTACAATTAATTCAGTCAAAACATATTTCAATATTAGGTCAATGGTTACATCTTCTTCATCTGCCAGAATAACATGGGGGAAATCTCTGCA ->chrXVI_766516_767017_5:0:0_7:0:0_b -TTACTTCCTTACAATGTTTCAACCAGCAAGAAAATCCCGTTTACCCTGAATTGCTGGCCCCCTTTTATGAAAATTCATCCTATAATAAGAACGCGCCAATGGTAGAAATATTTTGGATCCTGGGGCCATCAGTTGGAGGTATTTCAGATCTGGAAGATTTGATTGTTTCTCTACATCCATTGATTTTCAAGATGGATCAC ->chrXVI_866925_867424_2:1:0_4:0:0_e -ACAGTTCGCTCTGAAATCTCCCCCTGGGTTTCCCAATGGAATGAAACGTTGGAAAAAGAACTATCCGACCCTCGATCTAATTTGACTAGACATATTAGGATGAATTTCGAAACCTTTAGGTCATTACCTACATTGAAAAATAGCATAATTCCATTAGTAGCGACATCCAAAAATTTTGGTTCACTGTGCACTGCCATAAA ->chrXVI_889501_889988_11:0:0_5:0:0_0 -TGGAATTTATTTCGTCCAGAATAGTATATTCCTTCCACAAGAACCATGCAACCTGGGACGTAGTAATGTCGTTGTGTAGGGATAGTTTGGGAAATGTCAATTTCGACAGATCCAGACGGATCTTCCAGTGACCAATTGCCCTTAAAGTTCTTATTTAAGAGCCCCAATAGTAGAAAGTTTTGAGCATCCCTACCTAGTAG ->chrXVI_908795_909263_5:0:0_2:0:0_a -ATTTCGCCTGAGCTTGAAAGGGCGCAGTAGTTGGTTTAGAGTAATGGTATGGTTGTCTGATAGGTATCCTACTTTTTATGAAAGAACTTGAAATGCTATCAATTGATCTTGGAGATATTGAACTTTTGAATTTTGTAGGACTGTTTCCCATTTGGTTGAGCAAACGGTCATTCTCGTCATCATCATCTTCTTCTACTCCT ->chrXVI_912895_913350_7:0:0_5:0:0_9 -ATAACCATTTAGCGTGGAAAGGACTTTTTCTCTTATTTAGAACCACTGAGGTTGTCCCAGACATACTTTCGTATGATGAATATTTTGACCTGTGTGGCCAATATGCAGACGCACTTTAAAAGCCGGAACAGTCTCAAGTAGAACTAATAAATGACAAAAAATTACTACAGCAAACGCATCCATATTGTCAAAAAGCCTTT +>chrX_20624_21148_5:0:0_6:0:0_6 +CATTGAGAGGTTTGGACTCCGTACGTGTCTATTGTGGGGTGCTGCTTCTATGCTATGCTGCTTTGCTGTGTTTGCCTCCGTCGGTGTGACAAAGAAGTGGCCTCAAGGCAGCAGTCACCAAGACATTACTTCTCAGGGCGCCGGTAACTGTATGCTTGTGTTTACTATGTTCTTCATTTTTTCGTTCGCCACCACTTGGG +>chrX_32511_32973_6:0:0_10:0:0_7 +TCTCATGTGTCGTTTGAACTTTCCCTCTAATACGAAACTCTTGCGATTGATAACCATATATAGGACCCACTACATCTGAACCAAAACACATTTTAACTTTTATTTTGTGGGCAATTTTCATTGCATCAATTCCTTTGTAAAGCACCTCTGTATTTTTTCTACTATTTTCAGGTCCCAAGCAAGCACTAAATTGATCAGAA +>chrX_75095_75508_2:0:0_2:0:0_2 +AAAAACTCAAATATTTAGGACGCGCGATTACCAGCGGCATGTTTACTCGCTGGAAGATGTGAAATAATTCTTGAATATGGGTTTGCAGTTAGACAATTTCAATCTAAATAATCTTAATCGACTATTCAATTCTTAAATTGTAAGGTTTTTTAATGGCCTTTCAGTTCTAGTATTTTTTATAAAACAAGACCAACATACAT +>chrX_131958_132464_9:0:0_5:0:0_0 +GAATGGCACATTGTAAATTCAGTTTCAGAAACAGATCTGTGCCTGAGATGTTGCAAGAATTAAAGCTATCATTGATACACCGAGAAACAAATTTAAACATTTGCTTTAAAAGATTGGAATAATGGGAAAGTAACGTCATGTTATCGGGTCTTTTTTTCAAAATGTACTCTTGTATCATACTGCAATTCCTCATCAGTTTC +>chrX_185042_185518_4:0:0_1:0:0_b +CGATCAATGGGGGCTGAAATCTTATGTTTTCCCAGTGCGTTCACTATTAAAACAGGGGAAGCACATTGGTAGTTACTAGGCAGCGCACGCGCGGTTGACACTCAATGCTATGTGCTCATGCCAGGGCAGGTTGGAATGCACGATCTCAGTGATCCAGAGTGGGAGAAACAATCACATATGAGCGCTCTCGAAAAAAGCTC +>chrX_204570_205015_2:0:0_10:0:0_3 +AACTCATAGCTTCAAAATTTAATAAAAGATAATAGGATTACGTAGATGAGCCAAAAAAAATAAAAAAACGGACGTACTGCAGCCTGTTCAAGGACGGCTTGGTCGATTGTTTTTCTGTGTCGTAGAACTAGACTGAATATATATCATCGGTATCTTATACCCTCCTACAAGGTGGAAATAGTACGAGAACAGTCATCAAG +>chrX_358634_359139_4:0:0_4:0:0_9 +TTCACCTTGGCTCACTAGTTCGTGAAGCTCATCGTAAATGGATAACCAAAGGGTGATGATAGTGCATGCAATGAAAATATCCAAGGGATAATTGCACGTCAGGACGTGGTCCCAAACGATTAGCACATATTTTAAGGGTAATTCTCTTAAAAATAACAACCATGTCCATCGGATGAGCCAGATTAGGTTGGAGTGAATCA +>chrX_382849_383384_3:0:0_5:0:0_1 +TTTCACTATTTTATCTACAATACGTCGTGTTCGCAATAATCACCATCGTCATCTTCATCTTCGTCGTCATAATCAGCGGCACCAGAACCATCATCACCTCCGTACAACTTAGAAGTAATTTGATAAGCGACCTTGGACAAAGATTCGAACTTTTCATCAAAGTCTTCAGCAATGGCGGTTTCAAAGTTATCATCTAACCA +>chrX_438844_439314_5:1:0_2:0:0_8 +TGGTTTTTTCGTCATCCATACTAGGTTCTTCATCGTTCTCGGAAAGACTATCATTACTCTGCTCCTCAATCTCAGAAACATCAGCAGAGAGCATCTGCTTTTCTTTAAAAACACTTTCTGCCTCCTCTAGTTCACTTTCTTCCCCGGATGATGAGTTCAGGGTGCTACCATCAGAGAGATTGTGAGAAGGCGTGAGCACA +>chrX_582991_583504_1:0:0_3:0:0_a +GTTGCTATTAACATTATTATTGGGCTTACTCAAAAAATCGTTTATACTCTTTTTTCCCTTGAGCATATTTGGTGAATTATTTACGTCCACAAATGTCTGTTGAATTCTTTTGGTAAAAGTAGAGAGGTATTCACTTGGGTTCTGGTTACCTAATTTCTGTTGTCCATTTCGGGGCAGTGTATCTTTGAACTGTAACTCTA +>chrX_610495_611012_5:0:0_2:0:0_5 +AAGGATAAGTCCATCTCATTGGAAAAACAGTCCGGTATGAAGAAAAACATAAGCATTGGTGCTCAACTACTGAAAGAAGAAGGTTTTAGAGCTTTGTACAAGGGTATTACGCGAAGAGTGATGAGGGTGGCTCCAGGTCAGTCTGTCACCTTTACCGTTTATGAATATGTAAGGGAGCATTTAGAAAATTTGGGTATATT +>chrX_743509_743937_3:0:0_2:0:0_4 +TCGAGAAGGGTTGTTCTGAACGCTTCTTGGCAGCCCATGGCATTGAAGAAAAAGTACCTAGTATTCCAAGCCTTATTTTCATCTAAGTACGAATTTAGATTTGCTGCCACAACTTCCCAATCATGAGGATCAGAACATGGTGTGTTTTCAGTAACCTCTTTGCAAAACTGAATGAGTTGTTTCGATAAGGAACGCTTACG diff -r a0d039fa9771 -r a8d69aee190e test-data/samtools_fastx-out3-3.fasta.gz Binary file test-data/samtools_fastx-out3-3.fasta.gz has changed