Mercurial > repos > iuc > samtools_fixmate

annotate test-data/3_reverse_read_pp_lt.sam.expected @ 0:bc0cc7bfbfe9 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
author iuc
date Fri, 28 Sep 2018 04:28:45 -0400
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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bc0cc7bfbfe9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
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diff changeset
1 @HD VN:1.4 SO:queryname
bc0cc7bfbfe9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
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diff changeset
2 @SQ SN:1 LN:4569345
bc0cc7bfbfe9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
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diff changeset
3 @RG ID:1#6 LB:1 SM:a
bc0cc7bfbfe9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff changeset
4 MS0_12500:1:2114:20577:3664#6 99 1 40346 23 75M = 40340 69 CTCATGGACACCAACCACTCAATTATCTATCCACCTAGCCATGGCCATCACCTTATGAGCGGGCGCAGTGACTAT CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGD X0:i:1 X1:i:1 XA:Z:X,+8796,75M,2; MD:Z:22C52 RG:Z:1#6 XG:i:0 AM:i:23 NM:i:1 SM:i:23 XM:i:1 XO:i:0 XT:A:U MQ:i:23 MC:Z:75M
bc0cc7bfbfe9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_fixmate commit 0fe00966500158720fb63dc9b28f6a4ca0d1e1eb
iuc
parents:
diff changeset
5 MS0_12500:1:2114:20577:3664#6 147 1 40340 23 75M = 40346 -69 CAAAATCTCATGGACACCAACCACTCAATTATCTATCCACCTAGCCATGGCCATCACCTTATGAGCGGGCGCAGT GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFCCF@GGGGGGGGGCCCCC X0:i:1 X1:i:1 XA:Z:X,-8796,75M,2; MD:Z:22C52 RG:Z:1#6 XG:i:0 AM:i:23 NM:i:1 SM:i:23 XM:i:1 XO:i:0 XT:A:U MQ:i:23 MC:Z:75M