Mercurial > repos > iuc > samtools_view
changeset 11:df20f1fd453f draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_view commit 1d2666cfe206ef538fd811dbccaec2e8f3c6f7f0"
| author | iuc |
|---|---|
| date | Wed, 13 Oct 2021 13:11:51 +0000 |
| parents | 350bbc5c2ffd |
| children | c370440f901e |
| files | samtools_view.xml |
| diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/samtools_view.xml Tue Sep 28 16:18:32 2021 +0000 +++ b/samtools_view.xml Wed Oct 13 13:11:51 2021 +0000 @@ -1,4 +1,4 @@ -<tool id="samtools_view" name="Samtools view" version="@TOOL_VERSION@" profile="@PROFILE@"> +<tool id="samtools_view" name="Samtools view" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@"> <description>- reformat, filter, or subsample SAM, BAM or CRAM</description> <macros> <import>macros.xml</import> @@ -313,7 +313,7 @@ </param> <param argument="--tag" type="text" optional="true" label="Filter by tag" help="Only include reads with tag STR1 and associated value STR2. Write in the format STR1:STR2 (see help for more details)." /> <!-- TODO implement -D --> - <param argument="--qname-file" format="text" optional="true" type="data" label="Filter by readnames" help="Only output alignments with readnames that are listed in this file." /> + <param argument="--qname-file" format="txt" optional="true" type="data" label="Filter by readnames" help="Only output alignments with readnames that are listed in this file." /> </section> <section name="subsample_config" title="Configure subsampling" expanded="false"> <conditional name="subsampling_mode">