Mercurial > repos > iuc > sansa_annotate
comparison annotate.xml @ 2:30079fa4e2fd draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sansa commit f62fcf6b6a22e6514a5e455ab0e9b42ad712c1be"
author | iuc |
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date | Sat, 17 Apr 2021 08:49:25 +0000 |
parents | e3862632706d |
children | b1ca9fce4749 |
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1:e3862632706d | 2:30079fa4e2fd |
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30 #if $type_cond.type_sel == 'fg' or $type_cond.type_sel == 'sfg' | 30 #if $type_cond.type_sel == 'fg' or $type_cond.type_sel == 'sfg' |
31 --gtf 'db.gtf.gz' | 31 --gtf 'db.gtf.gz' |
32 --id '$type_cond.fg.id' | 32 --id '$type_cond.fg.id' |
33 --feature '$type_cond.fg.feature' | 33 --feature '$type_cond.fg.feature' |
34 --distance $type_cond.fg.distance | 34 --distance $type_cond.fg.distance |
35 $type_cond.fg.contained | |
35 #end if | 36 #end if |
36 ## input | 37 ## input |
37 '$input' | 38 '$input' |
38 | 39 |
39 ## postprocessing | 40 ## postprocessing |
188 <has_size value="2408"/> | 189 <has_size value="2408"/> |
189 </assert_contents> | 190 </assert_contents> |
190 </output> | 191 </output> |
191 <output name="out_query"> | 192 <output name="out_query"> |
192 <assert_contents> | 193 <assert_contents> |
193 <has_size value="91"/> | 194 <has_size value="101"/> |
194 </assert_contents> | 195 </assert_contents> |
195 </output> | 196 </output> |
196 <output name="out_log"> | 197 <output name="out_log"> |
197 <assert_contents> | 198 <assert_contents> |
198 <has_text_matching expression=".+Done.+"/> | 199 <has_text_matching expression=".+Done.+"/> |
259 <has_size value="57072"/> | 260 <has_size value="57072"/> |
260 </assert_contents> | 261 </assert_contents> |
261 </output> | 262 </output> |
262 <output name="out_query"> | 263 <output name="out_query"> |
263 <assert_contents> | 264 <assert_contents> |
264 <has_size value="91"/> | 265 <has_size value="101"/> |
265 </assert_contents> | 266 </assert_contents> |
266 </output> | 267 </output> |
267 <output name="out_log"> | 268 <output name="out_log"> |
268 <assert_contents> | 269 <assert_contents> |
269 <has_text_matching expression=".+Done.+"/> | 270 <has_text_matching expression=".+Done.+"/> |