diff remove_confounders.xml @ 12:458e8f43a775 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy/ commit 6fc3a3aa54d7ece1fd8bfffe62ad7e2b620539e0

--- a/remove_confounders.xml	Wed Nov 08 14:45:35 2023 +0000
+++ b/remove_confounders.xml	Fri Nov 17 09:12:48 2023 +0000
@@ -1,4 +1,4 @@
-<tool id="scanpy_remove_confounders" name="Remove confounders" version="@galaxy_version@" profile="@profile@">
+<tool id="scanpy_remove_confounders" name="Remove confounders" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@profile@">
     <description>with scanpy</description>
     <macros>
         <import>macros.xml</import>
@@ -30,13 +30,13 @@
     #for i, filepath in enumerate($methods.extra_adata)
     adata_$i,
     #end for
-    #if str($methods.var_subset) != ''
+    #if $methods.var_subset
     #set $var_subset=([x.strip() for x in str($method.var_subset).split(',')])
     var_subset=$var_subset,
     #end if
     batch_key='$method.batch_key',
     index_unique='$method.index_unique'
-    #if str($methods.batch_categories) != ''
+    #if $methods.batch_categories
     #set $batch_categories=([x.strip() for x in str($method.batch_categories).split(',')])
     batch_categories=$batch_categories,
     #end if