# HG changeset patch
# User iuc
# Date 1716057017 0
# Node ID c65fce50091512a2cf1c2d71e0fd6b4fe4c56660
# Parent  d18e7a6e5cd4dddfd70c5840166f5d03d6847f7b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy/ commit 9d49b2a98de059ae9a053dc1c5a23537cf0311de

diff -r d18e7a6e5cd4 -r c65fce500915 macros.xml
--- a/macros.xml	Thu Mar 14 15:38:16 2024 +0000
+++ b/macros.xml	Sat May 18 18:30:17 2024 +0000
@@ -1,7 +1,7 @@
 <macros>
     <token name="@TOOL_VERSION@">1.9.6</token>
-    <token name="@VERSION_SUFFIX@">2</token>
-    <token name="@profile@">22.05</token>
+    <token name="@VERSION_SUFFIX@">3</token>
+    <token name="@profile@">21.09</token>
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@TOOL_VERSION@">scanpy</requirement>
diff -r d18e7a6e5cd4 -r c65fce500915 remove_confounders.xml
--- a/remove_confounders.xml	Thu Mar 14 15:38:16 2024 +0000
+++ b/remove_confounders.xml	Sat May 18 18:30:17 2024 +0000
@@ -180,7 +180,7 @@
 inspired by Seurat's `regressOut` function in R.
 
 More details on the `scanpy documentation
-<https://icb-scanpy.readthedocs-hosted.com/en/stable/api/scanpy.pp.regress_out.html>`__
+<https://scanpy.readthedocs.io/en/stable/api/scanpy.pp.regress_out.html>`__
 
 Correct batch effects by matching mutual nearest neighbors, using `pp.mnn_correct`
 ==================================================================================
@@ -200,7 +200,7 @@
 Corrects for batch effects by fitting linear models, gains statistical power via an EB framework where information is borrowed across genes. This uses the implementation of ComBat
 
 More details on the `scanpy documentation
-<https://icb-scanpy.readthedocs-hosted.com/en/stable/api/scanpy.pp.combat.html>`__
+<https://scanpy.readthedocs.io/en/stable/api/generated/scanpy.pp.combat.html>`__
 
 
     ]]></help>